BLASTX nr result
ID: Coptis24_contig00004456
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004456 (1835 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 753 0.0 ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 751 0.0 dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas] 748 0.0 ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|2... 748 0.0 ref|XP_004171175.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 746 0.0 >ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Vitis vinifera] gi|297743441|emb|CBI36308.3| unnamed protein product [Vitis vinifera] Length = 428 Score = 753 bits (1945), Expect = 0.0 Identities = 376/428 (87%), Positives = 395/428 (92%) Frame = +1 Query: 40 MGEPKDNNNXXXXXXXXXXXXXXXKAPDSIGTKPTNESAKKGYVGIHSSGFRDFLLKPEL 219 MGE +DN+ KAPDS+ +K ESAKKGYVGIHSSGFRDFLLKPEL Sbjct: 1 MGEARDND--AYEEELLDYEEEDEKAPDSVASKAAGESAKKGYVGIHSSGFRDFLLKPEL 58 Query: 220 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 399 LR+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA Sbjct: 59 LRSIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 118 Query: 400 LVLCHTRELAYQICHEFERFSKYLPDIKVSVFYGGVSIKTHRDLLKNECPHIVVGTPGRV 579 LVLCHTRELAYQICHEFERFS YLPDIKV+VFYGGVSIKTH+DLLKNECPHIVVGTPGR+ Sbjct: 119 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVSIKTHKDLLKNECPHIVVGTPGRI 178 Query: 580 LGLARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFRMTPHDKQVMMFSATLNKEIR 759 L LARDKDL LK+VRHFILDECDKMLESLDMR+DVQ+IF+MTPHDKQVMMFSATL+KEIR Sbjct: 179 LALARDKDLGLKHVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 238 Query: 760 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSENEKNRKLNDLLDGLDFNQVVIFVKS 939 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLD LDFNQVVIFVKS Sbjct: 239 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 298 Query: 940 VSRAAELNKLLTECNFPSTCIHSGMTQEERLTRYKGFKEGHKRMLVATDLVGRGIDIERV 1119 VSRAAELNKLL ECNFPS CIHSGM QEERLTRYK FKEGHKR+LVATDLVGRGIDIERV Sbjct: 299 VSRAAELNKLLMECNFPSICIHSGMPQEERLTRYKNFKEGHKRILVATDLVGRGIDIERV 358 Query: 1120 NIVLNYDMPDSADTYLHRVGRAGRFGTKGLAVTFVSSNSDSEVLNQVQERFEVDIKELPE 1299 NIV+NYDMPDSADTYLHRVGRAGRFGTKGLA+TFVSS SDS+VLNQVQERFEVDIKELPE Sbjct: 359 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPE 418 Query: 1300 DVDSSLYM 1323 +D+S YM Sbjct: 419 QIDTSTYM 426 >ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis vinifera] Length = 428 Score = 751 bits (1939), Expect = 0.0 Identities = 375/428 (87%), Positives = 394/428 (92%) Frame = +1 Query: 40 MGEPKDNNNXXXXXXXXXXXXXXXKAPDSIGTKPTNESAKKGYVGIHSSGFRDFLLKPEL 219 MGE +DN+ KAPDS+ K E+AKKGYVGIHSSGFRDFLLKPEL Sbjct: 1 MGETRDND--AYEEELLDYEEEEDKAPDSVTGKVNGEAAKKGYVGIHSSGFRDFLLKPEL 58 Query: 220 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 399 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPV GQVAA Sbjct: 59 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVTGQVAA 118 Query: 400 LVLCHTRELAYQICHEFERFSKYLPDIKVSVFYGGVSIKTHRDLLKNECPHIVVGTPGRV 579 LVLCHTRELAYQICHEFERFS YLPDIKV+VFYGGV+IK H+DLLKNECPHIVVGTPGR+ Sbjct: 119 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRI 178 Query: 580 LGLARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFRMTPHDKQVMMFSATLNKEIR 759 L LARDKDL+LKNVRHFILDECDKMLESLDMR+DVQ+IF+MTPHDKQVMMFSATL+KEIR Sbjct: 179 LALARDKDLALKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 238 Query: 760 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSENEKNRKLNDLLDGLDFNQVVIFVKS 939 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLD LDFNQVVIFVKS Sbjct: 239 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 298 Query: 940 VSRAAELNKLLTECNFPSTCIHSGMTQEERLTRYKGFKEGHKRMLVATDLVGRGIDIERV 1119 VSRAAELNKLL ECNFPS CIHSGM QEERLTRYKGFKEGHKR+LVATDLVGRGIDIERV Sbjct: 299 VSRAAELNKLLVECNFPSICIHSGMPQEERLTRYKGFKEGHKRILVATDLVGRGIDIERV 358 Query: 1120 NIVLNYDMPDSADTYLHRVGRAGRFGTKGLAVTFVSSNSDSEVLNQVQERFEVDIKELPE 1299 NIV+NYDMPDSADTYLHRVGRAGRFGTKGLA+TFVSS SDS+VLNQVQERFEVDIKELPE Sbjct: 359 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPE 418 Query: 1300 DVDSSLYM 1323 +D+S YM Sbjct: 419 QIDTSTYM 426 >dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas] Length = 455 Score = 748 bits (1932), Expect = 0.0 Identities = 373/427 (87%), Positives = 393/427 (92%) Frame = +1 Query: 40 MGEPKDNNNXXXXXXXXXXXXXXXKAPDSIGTKPTNESAKKGYVGIHSSGFRDFLLKPEL 219 MGE KDN+ KAPDS+ K ESAKKGYVGIHSSGFRDFLLKPEL Sbjct: 1 MGEVKDND--AYEEELLDYEEEDEKAPDSVSAKAGAESAKKGYVGIHSSGFRDFLLKPEL 58 Query: 220 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 399 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA Sbjct: 59 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 118 Query: 400 LVLCHTRELAYQICHEFERFSKYLPDIKVSVFYGGVSIKTHRDLLKNECPHIVVGTPGRV 579 LVLCHTRELAYQICHEFERFS YLPDIKV+VFYGGV+IK H+D+LKNECPHIVVGTPGR+ Sbjct: 119 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDILKNECPHIVVGTPGRI 178 Query: 580 LGLARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFRMTPHDKQVMMFSATLNKEIR 759 L LARDKDL LKNVRHFILDECDKMLESLDMR+DVQ+IF+MTPHDKQVMMFSATL+KEIR Sbjct: 179 LALARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 238 Query: 760 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSENEKNRKLNDLLDGLDFNQVVIFVKS 939 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+E EKNRKLNDLLD LDFNQVVIFVKS Sbjct: 239 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTEMEKNRKLNDLLDALDFNQVVIFVKS 298 Query: 940 VSRAAELNKLLTECNFPSTCIHSGMTQEERLTRYKGFKEGHKRMLVATDLVGRGIDIERV 1119 V+RAAELNKLL ECNFPS CIHSGM+QEERLTRYKGFKEGHKR+LVATDLVGRGIDIERV Sbjct: 299 VNRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERV 358 Query: 1120 NIVLNYDMPDSADTYLHRVGRAGRFGTKGLAVTFVSSNSDSEVLNQVQERFEVDIKELPE 1299 NIV+NYDMPDSADTYLHRVGRAGRFGTKGLA+TFVSS SDS+VLNQVQ RFEVDIKELPE Sbjct: 359 NIVVNYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQARFEVDIKELPE 418 Query: 1300 DVDSSLY 1320 +D+S Y Sbjct: 419 QIDTSTY 425 >ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|222855599|gb|EEE93146.1| predicted protein [Populus trichocarpa] Length = 428 Score = 748 bits (1932), Expect = 0.0 Identities = 371/428 (86%), Positives = 393/428 (91%) Frame = +1 Query: 40 MGEPKDNNNXXXXXXXXXXXXXXXKAPDSIGTKPTNESAKKGYVGIHSSGFRDFLLKPEL 219 MGE +DN+ KAPDS+G K E+ KKGYVGIHSSGFRDFLLKPEL Sbjct: 1 MGETRDNDTYEEELLDYEEEDE--KAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPEL 58 Query: 220 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 399 LR+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP +GQV A Sbjct: 59 LRSIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIA 118 Query: 400 LVLCHTRELAYQICHEFERFSKYLPDIKVSVFYGGVSIKTHRDLLKNECPHIVVGTPGRV 579 LVLCHTRELAYQICHEFERFS YLPD KV+VFYGGV+IKTH+DLLKNECPHIVVGTPGR+ Sbjct: 119 LVLCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRI 178 Query: 580 LGLARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFRMTPHDKQVMMFSATLNKEIR 759 L LARDKDLSLKNVRHFILDECDKMLESLDMR+DVQ+IF+MTPHDKQVMMFSATL+KEIR Sbjct: 179 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 238 Query: 760 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSENEKNRKLNDLLDGLDFNQVVIFVKS 939 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+E EKNRKLNDLLD LDFNQVVIFVKS Sbjct: 239 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKS 298 Query: 940 VSRAAELNKLLTECNFPSTCIHSGMTQEERLTRYKGFKEGHKRMLVATDLVGRGIDIERV 1119 VSRAAELNKLL ECNFPS CIHSGM+QEERL RYKGFKEGHKR+LVATDLVGRGIDIERV Sbjct: 299 VSRAAELNKLLVECNFPSICIHSGMSQEERLMRYKGFKEGHKRILVATDLVGRGIDIERV 358 Query: 1120 NIVLNYDMPDSADTYLHRVGRAGRFGTKGLAVTFVSSNSDSEVLNQVQERFEVDIKELPE 1299 NIV+NYDMPDSADTYLHRVGRAGRFGTKGLA+TFVSS SDS+VLNQVQERFEVDIKELPE Sbjct: 359 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPE 418 Query: 1300 DVDSSLYM 1323 +D+S YM Sbjct: 419 QIDTSTYM 426 >ref|XP_004171175.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Cucumis sativus] Length = 427 Score = 746 bits (1927), Expect = 0.0 Identities = 369/428 (86%), Positives = 394/428 (92%) Frame = +1 Query: 40 MGEPKDNNNXXXXXXXXXXXXXXXKAPDSIGTKPTNESAKKGYVGIHSSGFRDFLLKPEL 219 MGE +DN KAPDS+G K E+ KKGYVGIHSSGFRDFLLKPEL Sbjct: 1 MGETRDNE---YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPEL 57 Query: 220 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 399 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+PVAGQV+A Sbjct: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSA 117 Query: 400 LVLCHTRELAYQICHEFERFSKYLPDIKVSVFYGGVSIKTHRDLLKNECPHIVVGTPGRV 579 LVLCHTRELAYQICHEFERFS YLPD+KV+VFYGGV+IK H+DLLKNECPHIVVGTPGR+ Sbjct: 118 LVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRI 177 Query: 580 LGLARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFRMTPHDKQVMMFSATLNKEIR 759 L L+RDKDLSLKNVRHFILDECDKMLESLDMR+DVQ+IF+MTPHDKQVMMFSATL+KEIR Sbjct: 178 LALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237 Query: 760 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSENEKNRKLNDLLDGLDFNQVVIFVKS 939 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLD LDFNQVVIFVKS Sbjct: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKS 297 Query: 940 VSRAAELNKLLTECNFPSTCIHSGMTQEERLTRYKGFKEGHKRMLVATDLVGRGIDIERV 1119 V+RAAEL+KLL ECNFPS CIHSGM+QEERLTRYKGFKEGHKR+LVATDLVGRGIDIERV Sbjct: 298 VNRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERV 357 Query: 1120 NIVLNYDMPDSADTYLHRVGRAGRFGTKGLAVTFVSSNSDSEVLNQVQERFEVDIKELPE 1299 NIV+NYDMPDSADTYLHRVGRAGRFGTKGLA+TFVSS +DS+VLN VQERFEVDIKELPE Sbjct: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPE 417 Query: 1300 DVDSSLYM 1323 +D+S YM Sbjct: 418 QIDTSTYM 425