BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004453
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquino...   368   e-100
gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]     368   e-99 
ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus c...   364   1e-98
ref|NP_001234860.1| mitochondrial succinate dehydrogenase iron s...   362   4e-98
ref|NP_198881.1| succinate dehydrogenase [ubiquinone] iron-sulfu...   361   9e-98

>ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           2, mitochondrial-like [Cucumis sativus]
           gi|449492901|ref|XP_004159135.1| PREDICTED: succinate
           dehydrogenase [ubiquinone] iron-sulfur subunit 2,
           mitochondrial-like [Cucumis sativus]
          Length = 277

 Score =  368 bits (945), Expect = e-100
 Identities = 180/226 (79%), Positives = 188/226 (83%)
 Frame = +1

Query: 1   GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIETDDMKTASMI 180
           GPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACLTKI + D  T   I
Sbjct: 75  GPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISSGDSST---I 131

Query: 181 TPLPHMFVIKDLVVDMTQFYNQYKSIEPWLKRKTEGSETGKEILQSKKDRAKLDGMYECI 360
           TPLPHMFVIKDLVVDMT FYNQYKSIEPWLKRK+E    GKEILQSKKDRAKLDGMYECI
Sbjct: 132 TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECI 191

Query: 361 LCACCTTSXXXXXXXXXXXXXXXXXXXXXCPSYWWNPEKYLGPAALLHAHRWISDSRDEY 540
           LCACC+TS                     CPSYWWNPE YLGPAALLHA+RWISDSRDEY
Sbjct: 192 LCACCSTS---------------------CPSYWWNPESYLGPAALLHANRWISDSRDEY 230

Query: 541 TTERLDAINDEFKLYRCHTILNCARACPKGLNPGKQIQAIKTKEMM 678
           T ERLDAINDEFKLYRCHTILNCARACPKGLNPGKQIQ IK  +++
Sbjct: 231 TKERLDAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLV 276


>gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]
          Length = 277

 Score =  368 bits (944), Expect = e-99
 Identities = 179/226 (79%), Positives = 189/226 (83%)
 Frame = +1

Query: 1   GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIETDDMKTASMI 180
           GPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACLTKI + D  T   I
Sbjct: 75  GPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGDSST---I 131

Query: 181 TPLPHMFVIKDLVVDMTQFYNQYKSIEPWLKRKTEGSETGKEILQSKKDRAKLDGMYECI 360
           TPLPHMFVIKDLVVDMT FYNQYKSIEPWLKRK+E    GKEILQSKKDRAKLDGMYECI
Sbjct: 132 TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECI 191

Query: 361 LCACCTTSXXXXXXXXXXXXXXXXXXXXXCPSYWWNPEKYLGPAALLHAHRWISDSRDEY 540
           LCACC+TS                     CPSYWWNPE YLGPAALLHA+RWISDSRDEY
Sbjct: 192 LCACCSTS---------------------CPSYWWNPESYLGPAALLHANRWISDSRDEY 230

Query: 541 TTERLDAINDEFKLYRCHTILNCARACPKGLNPGKQIQAIKTKEMM 678
           T ERL+AINDEFKLYRCHTILNCARACPKGLNPGKQIQ IK+ +++
Sbjct: 231 TKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLL 276


>ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus communis]
           gi|223533696|gb|EEF35431.1| succinate dehydrogenase,
           putative [Ricinus communis]
          Length = 284

 Score =  364 bits (935), Expect = 1e-98
 Identities = 179/226 (79%), Positives = 185/226 (81%)
 Frame = +1

Query: 1   GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIETDDMKTASMI 180
           GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKI +    T+S I
Sbjct: 79  GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSGS--TSSTI 136

Query: 181 TPLPHMFVIKDLVVDMTQFYNQYKSIEPWLKRKTEGSETGKEILQSKKDRAKLDGMYECI 360
           TPLPHMFVIKDLVVDMT FYNQYKSIEPWLKRK      GKEI QSKKDRAKLDGMYECI
Sbjct: 137 TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPVDGKEIPQSKKDRAKLDGMYECI 196

Query: 361 LCACCTTSXXXXXXXXXXXXXXXXXXXXXCPSYWWNPEKYLGPAALLHAHRWISDSRDEY 540
           LCACC+TS                     CPSYWWNPE YLGPAALLHA+RWISDSRDEY
Sbjct: 197 LCACCSTS---------------------CPSYWWNPESYLGPAALLHANRWISDSRDEY 235

Query: 541 TTERLDAINDEFKLYRCHTILNCARACPKGLNPGKQIQAIKTKEMM 678
           T ERLDAINDEFKLYRCHTILNCARACPKGLNPGKQI  IK  +M+
Sbjct: 236 TNERLDAINDEFKLYRCHTILNCARACPKGLNPGKQIMHIKQLQMV 281


>ref|NP_001234860.1| mitochondrial succinate dehydrogenase iron sulfur subunit [Solanum
           lycopersicum] gi|270303918|gb|ACZ71182.1| mitochondrial
           succinate dehydrogenase iron sulfur subunit [Solanum
           lycopersicum]
          Length = 274

 Score =  362 bits (930), Expect = 4e-98
 Identities = 177/225 (78%), Positives = 182/225 (80%)
 Frame = +1

Query: 1   GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIETDDMKTASMI 180
           GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKI +D   T   I
Sbjct: 72  GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSDSEST---I 128

Query: 181 TPLPHMFVIKDLVVDMTQFYNQYKSIEPWLKRKTEGSETGKEILQSKKDRAKLDGMYECI 360
           TPLPHMFVIKDLVVDMT FYNQYKSIEPWLKRKT     GKEI QSK DRAKLDGMYECI
Sbjct: 129 TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPAPTPGKEIPQSKSDRAKLDGMYECI 188

Query: 361 LCACCTTSXXXXXXXXXXXXXXXXXXXXXCPSYWWNPEKYLGPAALLHAHRWISDSRDEY 540
           LCACC+TS                     CPSYWWNPE YLGPAALLHA+RWI DSRDEY
Sbjct: 189 LCACCSTS---------------------CPSYWWNPESYLGPAALLHANRWIMDSRDEY 227

Query: 541 TTERLDAINDEFKLYRCHTILNCARACPKGLNPGKQIQAIKTKEM 675
           T ERLDA+NDEFKLYRCHTILNC+RACPKGLNPGK IQ IK  EM
Sbjct: 228 TQERLDAVNDEFKLYRCHTILNCSRACPKGLNPGKHIQNIKKLEM 272


>ref|NP_198881.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2
           [Arabidopsis thaliana]
           gi|110808205|sp|Q8LB02.2|DHSB2_ARATH RecName:
           Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
           subunit 2, mitochondrial; AltName: Full=Iron-sulfur
           subunit of complex II; Short=Ip; Flags: Precursor
           gi|9758093|dbj|BAB08537.1| succinate dehydrogenase
           iron-protein subunit [Arabidopsis thaliana]
           gi|18377692|gb|AAL66996.1| putative succinate
           dehydrogenase iron-protein subunit [Arabidopsis
           thaliana] gi|21689851|gb|AAM67569.1| putative succinate
           dehydrogenase iron-protein subunit [Arabidopsis
           thaliana] gi|332007195|gb|AED94578.1| succinate
           dehydrogenase [ubiquinone] iron-sulfur subunit 2
           [Arabidopsis thaliana]
          Length = 280

 Score =  361 bits (927), Expect = 9e-98
 Identities = 176/221 (79%), Positives = 184/221 (83%)
 Frame = +1

Query: 1   GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIETDDMKTASMI 180
           GPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACLTKIE+   +T   I
Sbjct: 77  GPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETT--I 134

Query: 181 TPLPHMFVIKDLVVDMTQFYNQYKSIEPWLKRKTEGSETGKEILQSKKDRAKLDGMYECI 360
           TPLPHMFVIKDLVVDMT FYNQYKSIEPWLKRK   S  GKEILQSKKDRAKLDGMYECI
Sbjct: 135 TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQSKKDRAKLDGMYECI 194

Query: 361 LCACCTTSXXXXXXXXXXXXXXXXXXXXXCPSYWWNPEKYLGPAALLHAHRWISDSRDEY 540
           LCACC+TS                     CPSYWWNPE YLGPAALLHA+RWISDSRDEY
Sbjct: 195 LCACCSTS---------------------CPSYWWNPESYLGPAALLHANRWISDSRDEY 233

Query: 541 TTERLDAINDEFKLYRCHTILNCARACPKGLNPGKQIQAIK 663
           T ERL+AI+DEFKLYRCHTILNCARACPKGLNPGKQI  IK
Sbjct: 234 TKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIK 274