BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004452
         (2047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   506   e-141
emb|CBI17547.3| unnamed protein product [Vitis vinifera]              506   e-141
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   506   e-141
ref|XP_002525113.1| splicing factor u2af large subunit, putative...   499   e-138
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni...   498   e-138

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score =  506 bits (1303), Expect = e-141
 Identities = 261/309 (84%), Positives = 271/309 (87%)
 Frame = -1

Query: 1603 MLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMSA 1424
            M   +FPL++G  F  LPVMPVQAMTQQATRHARRVYVGGLSP+ANEQSVATFFSQVMSA
Sbjct: 202  MFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSA 260

Query: 1423 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 1244
            IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP
Sbjct: 261  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 320

Query: 1243 SLAAALGPSHPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 1064
            SLAA LGPS PNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGPL
Sbjct: 321  SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 380

Query: 1063 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 884
            RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE
Sbjct: 381  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 440

Query: 883  QETXXXXXXXXXXXXXXLFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVEDMREESR 704
            QE               +FQ  PG L T+VVCLTQVV+ADEL+DD+ YEDIVEDMR E  
Sbjct: 441  QENVLLHAQQQIALQRLMFQ--PGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGG 498

Query: 703  KFGRCFNVS 677
            KFG   NV+
Sbjct: 499  KFGNLVNVA 507



 Score =  124 bits (312), Expect = 7e-26
 Identities = 57/68 (83%), Positives = 63/68 (92%)
 Frame = -2

Query: 435 GNLVNVAIPRPNANGEPSPGVGKVFLEYADTDGASKARTGMNGRKFGGNPVVAVFYPEDK 256
           GNLVNVAIPRP  NGEP+PG+GKVFLEYAD DGA+KARTG+NGRKF GN VVAVFYPE+K
Sbjct: 501 GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENK 560

Query: 255 FSQGDYDG 232
           FSQG+YDG
Sbjct: 561 FSQGEYDG 568


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  506 bits (1303), Expect = e-141
 Identities = 261/309 (84%), Positives = 271/309 (87%)
 Frame = -1

Query: 1603 MLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMSA 1424
            M   +FPL++G  F  LPVMPVQAMTQQATRHARRVYVGGLSP+ANEQSVATFFSQVMSA
Sbjct: 27   MFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSA 85

Query: 1423 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 1244
            IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP
Sbjct: 86   IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 145

Query: 1243 SLAAALGPSHPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 1064
            SLAA LGPS PNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGPL
Sbjct: 146  SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 205

Query: 1063 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 884
            RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE
Sbjct: 206  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 265

Query: 883  QETXXXXXXXXXXXXXXLFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVEDMREESR 704
            QE               +FQ  PG L T+VVCLTQVV+ADEL+DD+ YEDIVEDMR E  
Sbjct: 266  QENVLLHAQQQIALQRLMFQ--PGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGG 323

Query: 703  KFGRCFNVS 677
            KFG   NV+
Sbjct: 324  KFGNLVNVA 332



 Score =  124 bits (312), Expect = 7e-26
 Identities = 57/68 (83%), Positives = 63/68 (92%)
 Frame = -2

Query: 435 GNLVNVAIPRPNANGEPSPGVGKVFLEYADTDGASKARTGMNGRKFGGNPVVAVFYPEDK 256
           GNLVNVAIPRP  NGEP+PG+GKVFLEYAD DGA+KARTG+NGRKF GN VVAVFYPE+K
Sbjct: 326 GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENK 385

Query: 255 FSQGDYDG 232
           FSQG+YDG
Sbjct: 386 FSQGEYDG 393


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  506 bits (1303), Expect = e-141
 Identities = 261/309 (84%), Positives = 271/309 (87%)
 Frame = -1

Query: 1603 MLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMSA 1424
            M   +FPL++G  F  LPVMPVQAMTQQATRHARRVYVGGLSP+ANEQSVATFFSQVMSA
Sbjct: 199  MFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSA 257

Query: 1423 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 1244
            IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP
Sbjct: 258  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 317

Query: 1243 SLAAALGPSHPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 1064
            SLAA LGPS PNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGPL
Sbjct: 318  SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 377

Query: 1063 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 884
            RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE
Sbjct: 378  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 437

Query: 883  QETXXXXXXXXXXXXXXLFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVEDMREESR 704
            QE               +FQ  PG L T+VVCLTQVV+ADEL+DD+ YEDIVEDMR E  
Sbjct: 438  QENVLLHAQQQIALQRLMFQ--PGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGG 495

Query: 703  KFGRCFNVS 677
            KFG   NV+
Sbjct: 496  KFGNLVNVA 504



 Score =  124 bits (310), Expect = 1e-25
 Identities = 57/68 (83%), Positives = 62/68 (91%)
 Frame = -2

Query: 435 GNLVNVAIPRPNANGEPSPGVGKVFLEYADTDGASKARTGMNGRKFGGNPVVAVFYPEDK 256
           GNLVNVAIPRP  NGEP+PG+GKVFLEYAD DGA KARTG+NGRKF GN VVAVFYPE+K
Sbjct: 498 GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDGNQVVAVFYPENK 557

Query: 255 FSQGDYDG 232
           FSQG+YDG
Sbjct: 558 FSQGEYDG 565


>ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
            gi|223535572|gb|EEF37240.1| splicing factor u2af large
            subunit, putative [Ricinus communis]
          Length = 549

 Score =  499 bits (1285), Expect = e-138
 Identities = 255/305 (83%), Positives = 265/305 (86%)
 Frame = -1

Query: 1603 MLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMSA 1424
            M   +FPL TG  F TLPVMPVQAMTQQATRHARRVYVGGL P+ANEQSVATFFS VM+A
Sbjct: 223  MFPNMFPLGTGQQFGTLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMAA 282

Query: 1423 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 1244
            IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP
Sbjct: 283  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 342

Query: 1243 SLAAALGPSHPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 1064
            SLAA LGPS PNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGPL
Sbjct: 343  SLAATLGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 402

Query: 1063 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 884
            RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA+QPKPE
Sbjct: 403  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 462

Query: 883  QETXXXXXXXXXXXXXXLFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVEDMREESR 704
            QET              + Q     +PT+VVCLTQVV+ADEL+DD EYEDI+EDMR E  
Sbjct: 463  QETVLLHAQQQIALQRLMLQ----PVPTKVVCLTQVVTADELKDDDEYEDILEDMRTEGG 518

Query: 703  KFGRC 689
            KF  C
Sbjct: 519  KFAFC 523


>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
            sativus]
          Length = 587

 Score =  498 bits (1281), Expect = e-138
 Identities = 252/308 (81%), Positives = 269/308 (87%)
 Frame = -1

Query: 1603 MLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMSA 1424
            M  T+FPL+TG  F  LPVMPVQAMTQQATRHARRVYVGGL P+ANEQSVATFFSQVM+A
Sbjct: 221  MFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 280

Query: 1423 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 1244
            IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP
Sbjct: 281  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 340

Query: 1243 SLAAALGPSHPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 1064
            SLAA LGPS PNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE Q+RELLESFGPL
Sbjct: 341  SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 400

Query: 1063 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 884
            RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA+QPKPE
Sbjct: 401  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 460

Query: 883  QETXXXXXXXXXXXXXXLFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVEDMREESR 704
            QE+              + Q  PG + T+V+CLTQVV+ +EL +D++YEDI+EDMR E  
Sbjct: 461  QESVLLHAQQQIALQKLMLQ--PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGG 518

Query: 703  KFGRCFNV 680
            KFG   NV
Sbjct: 519  KFGTLVNV 526



 Score =  105 bits (263), Expect = 4e-20
 Identities = 50/67 (74%), Positives = 57/67 (85%)
 Frame = -2

Query: 435 GNLVNVAIPRPNANGEPSPGVGKVFLEYADTDGASKARTGMNGRKFGGNPVVAVFYPEDK 256
           G LVNV IPRP  N E +PGVGKVFLEYAD D A+KAR G+NGRKFGGN V+AVFYPE+K
Sbjct: 521 GTLVNVVIPRPRPN-EAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENK 579

Query: 255 FSQGDYD 235
           F+QG+YD
Sbjct: 580 FAQGEYD 586