BLASTX nr result

ID: Coptis24_contig00004446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004446
         (1330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240268.1| uncharacterized protein LOC100792693 [Glycin...   375   e-101
ref|XP_004141976.1| PREDICTED: uncharacterized protein LOC101210...   374   e-101
ref|XP_003526843.1| PREDICTED: uncharacterized protein LOC100801...   373   e-101
ref|XP_002533511.1| conserved hypothetical protein [Ricinus comm...   373   e-101
ref|XP_002300910.1| predicted protein [Populus trichocarpa] gi|2...   366   6e-99

>ref|NP_001240268.1| uncharacterized protein LOC100792693 [Glycine max]
            gi|255640177|gb|ACU20379.1| unknown [Glycine max]
          Length = 258

 Score =  375 bits (964), Expect = e-101
 Identities = 186/238 (78%), Positives = 204/238 (85%), Gaps = 3/238 (1%)
 Frame = -3

Query: 1265 RDEAEDPVKSPPNSP---TRKACYVVLQSWVSKKFMTGCVVLFPVAVTFFITWWFIQFVD 1095
            RD+ EDP KSPP+SP   TRKAC  VLQSWVSKKFMTGCVVLFPVAVTFFITWWFIQFVD
Sbjct: 20   RDDPEDPAKSPPSSPNSSTRKACCFVLQSWVSKKFMTGCVVLFPVAVTFFITWWFIQFVD 79

Query: 1094 GFFSPIYARLGINIFGLGFITXXXXXXXXXXXXXXXXXSTVIWIGEWFIKRMPFVKHIYS 915
            GFFSPIY+RLGI++FGLGFIT                 +TV WIGEWFIKRMP V+HIYS
Sbjct: 80   GFFSPIYSRLGIDVFGLGFITSLAFVFLIGVFVSSWMGATVFWIGEWFIKRMPLVRHIYS 139

Query: 914  ASKQISSAISPDQNTMAFKEVAIIRHPRVGEYAFGFITSSVVLQRDHGDEELCSVYVPTN 735
            ASKQIS+AISPDQNT AFKEVAIIRHPRVGEYAFGFITS+V+LQ+D+ DEELCSV+VPTN
Sbjct: 140  ASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVILQKDNEDEELCSVFVPTN 199

Query: 734  HLYIGDIFLVSSEEIIRPNLSIREGIEIIVSGGMTMPQLISPQERIPRQGDRIPLNRI 561
            HLYIGDIFLV+S++IIRPNLSIREGIEIIVSGGMTMPQLISP ER  R  +R+ LNRI
Sbjct: 200  HLYIGDIFLVNSKDIIRPNLSIREGIEIIVSGGMTMPQLISPVERDTRPNERVSLNRI 257


>ref|XP_004141976.1| PREDICTED: uncharacterized protein LOC101210357 [Cucumis sativus]
            gi|449497697|ref|XP_004160483.1| PREDICTED:
            uncharacterized LOC101210357 [Cucumis sativus]
          Length = 257

 Score =  374 bits (960), Expect = e-101
 Identities = 184/241 (76%), Positives = 205/241 (85%), Gaps = 3/241 (1%)
 Frame = -3

Query: 1274 DRVRDEAEDPVKSPPNSP---TRKACYVVLQSWVSKKFMTGCVVLFPVAVTFFITWWFIQ 1104
            D    + EDPVKSPP+SP   TRKAC  VLQSWVSKKFMTGCVVLFPVAVTFF+TWWFIQ
Sbjct: 16   DNGGQDPEDPVKSPPSSPNSSTRKACCYVLQSWVSKKFMTGCVVLFPVAVTFFVTWWFIQ 75

Query: 1103 FVDGFFSPIYARLGINIFGLGFITXXXXXXXXXXXXXXXXXSTVIWIGEWFIKRMPFVKH 924
            FVDGFFSP+Y RLG++IFGLGFIT                 ST+ W+GEWFI+RMPFV+H
Sbjct: 76   FVDGFFSPLYERLGVDIFGLGFITSLLFVFFVGIFVSSWLGSTLFWLGEWFIQRMPFVRH 135

Query: 923  IYSASKQISSAISPDQNTMAFKEVAIIRHPRVGEYAFGFITSSVVLQRDHGDEELCSVYV 744
            +YSASKQIS+AISPDQNT AFKEVAIIRHPRVGEYAFGFITS+V LQR+  DEELCSV+V
Sbjct: 136  LYSASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVTLQRESEDEELCSVFV 195

Query: 743  PTNHLYIGDIFLVSSEEIIRPNLSIREGIEIIVSGGMTMPQLISPQERIPRQGDRIPLNR 564
            PTNHLYIGDIFLV+S++IIRPNLSIREGIEIIVSGGMTMPQ+I+P ER+ RQGDRI LNR
Sbjct: 196  PTNHLYIGDIFLVNSKDIIRPNLSIREGIEIIVSGGMTMPQIITPLERVDRQGDRITLNR 255

Query: 563  I 561
            I
Sbjct: 256  I 256


>ref|XP_003526843.1| PREDICTED: uncharacterized protein LOC100801920 [Glycine max]
          Length = 258

 Score =  373 bits (958), Expect = e-101
 Identities = 187/245 (76%), Positives = 205/245 (83%), Gaps = 4/245 (1%)
 Frame = -3

Query: 1283 NNGDRV-RDEAEDPVKSP---PNSPTRKACYVVLQSWVSKKFMTGCVVLFPVAVTFFITW 1116
            + GD   RD+ EDP KSP   PNS TR+AC  VLQSWVSKKFMTGCVVLFPVAVTFFITW
Sbjct: 13   SQGDNASRDDPEDPAKSPLSSPNSSTRRACCFVLQSWVSKKFMTGCVVLFPVAVTFFITW 72

Query: 1115 WFIQFVDGFFSPIYARLGINIFGLGFITXXXXXXXXXXXXXXXXXSTVIWIGEWFIKRMP 936
            WFIQFVDGFFSPIY+RLGI++FGLGF+T                 +TV WIGEWFIKRMP
Sbjct: 73   WFIQFVDGFFSPIYSRLGIDVFGLGFVTSLAFVFLIGVFVSSWMGATVFWIGEWFIKRMP 132

Query: 935  FVKHIYSASKQISSAISPDQNTMAFKEVAIIRHPRVGEYAFGFITSSVVLQRDHGDEELC 756
             V+HIYSASKQIS+AISPDQNT AFKEVAIIRHPRVGEYAFGFITS+V LQ+D+ DEELC
Sbjct: 133  LVRHIYSASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVTLQKDNEDEELC 192

Query: 755  SVYVPTNHLYIGDIFLVSSEEIIRPNLSIREGIEIIVSGGMTMPQLISPQERIPRQGDRI 576
            SV+VPTNHLYIGDIFLV+S++IIRPNLSIREGIEIIVSGGMTMPQLISP ER  R  +RI
Sbjct: 193  SVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGIEIIVSGGMTMPQLISPVERATRPNERI 252

Query: 575  PLNRI 561
             LNRI
Sbjct: 253  SLNRI 257


>ref|XP_002533511.1| conserved hypothetical protein [Ricinus communis]
            gi|223526635|gb|EEF28880.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 258

 Score =  373 bits (957), Expect = e-101
 Identities = 182/242 (75%), Positives = 206/242 (85%), Gaps = 3/242 (1%)
 Frame = -3

Query: 1274 DRVRDEAEDPVKSPP---NSPTRKACYVVLQSWVSKKFMTGCVVLFPVAVTFFITWWFIQ 1104
            + V ++ EDP KSPP   NS TR+AC  +LQSWVSKKFMTGCVVLFP+AVTFFITWW IQ
Sbjct: 17   ENVCEDPEDPAKSPPSSSNSSTREACCFILQSWVSKKFMTGCVVLFPIAVTFFITWWLIQ 76

Query: 1103 FVDGFFSPIYARLGINIFGLGFITXXXXXXXXXXXXXXXXXSTVIWIGEWFIKRMPFVKH 924
            FVDGFFSPIY RLGI+IFGLGF+T                 S V W+GEWFIKRMPFVKH
Sbjct: 77   FVDGFFSPIYERLGIDIFGLGFVTSLVFVFFVGVFVSSWIGSNVFWLGEWFIKRMPFVKH 136

Query: 923  IYSASKQISSAISPDQNTMAFKEVAIIRHPRVGEYAFGFITSSVVLQRDHGDEELCSVYV 744
            +YSASKQIS+AI+PDQNT AFKEVAIIRHPRVGEYAFGFITS+V+LQ+++ DEELCSV+V
Sbjct: 137  LYSASKQISAAIAPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVILQKENEDEELCSVFV 196

Query: 743  PTNHLYIGDIFLVSSEEIIRPNLSIREGIEIIVSGGMTMPQLISPQERIPRQGDRIPLNR 564
            PTNHLYIGDIFLV+S+EIIRPNLSIREGIEIIVSGGMTMPQ+I+P ER+ RQ +RIPLNR
Sbjct: 197  PTNHLYIGDIFLVNSKEIIRPNLSIREGIEIIVSGGMTMPQMITPLERVARQSERIPLNR 256

Query: 563  IV 558
            IV
Sbjct: 257  IV 258


>ref|XP_002300910.1| predicted protein [Populus trichocarpa] gi|222842636|gb|EEE80183.1|
            predicted protein [Populus trichocarpa]
          Length = 257

 Score =  366 bits (940), Expect = 6e-99
 Identities = 181/236 (76%), Positives = 199/236 (84%), Gaps = 3/236 (1%)
 Frame = -3

Query: 1259 EAEDPVKSPPNSP---TRKACYVVLQSWVSKKFMTGCVVLFPVAVTFFITWWFIQFVDGF 1089
            + +D  KSPP SP   TRKACY VLQSW SKKFMTGCVVLFPVAVTF +TWWFIQFVDGF
Sbjct: 22   DPDDIPKSPPGSPNSSTRKACYAVLQSWASKKFMTGCVVLFPVAVTFLVTWWFIQFVDGF 81

Query: 1088 FSPIYARLGINIFGLGFITXXXXXXXXXXXXXXXXXSTVIWIGEWFIKRMPFVKHIYSAS 909
            FSPIYA LGI+IFGLGF+T                 +TV  +GEWFIKRMPFVKH+YSAS
Sbjct: 82   FSPIYAHLGIDIFGLGFVTSIIFILFIGIFASSWLGATVFLVGEWFIKRMPFVKHLYSAS 141

Query: 908  KQISSAISPDQNTMAFKEVAIIRHPRVGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHL 729
            KQISSAISPDQNT AFKEVAIIRHPR GEYAFGFITSS+VLQR++GDEELCSVYVPTNHL
Sbjct: 142  KQISSAISPDQNTTAFKEVAIIRHPRHGEYAFGFITSSLVLQRENGDEELCSVYVPTNHL 201

Query: 728  YIGDIFLVSSEEIIRPNLSIREGIEIIVSGGMTMPQLISPQERIPRQGDRIPLNRI 561
            YIGD+FLV+SEEIIRPNLSIREGIEIIVS GMTMPQ++SP ERIP   +R+PLNR+
Sbjct: 202  YIGDVFLVNSEEIIRPNLSIREGIEIIVSIGMTMPQVLSPIERIPHPSNRLPLNRV 257


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