BLASTX nr result

ID: Coptis24_contig00004440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004440
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277378.1| PREDICTED: protein FAR1-RELATED SEQUENCE 7-l...   127   3e-27
ref|XP_004134160.1| PREDICTED: protein FAR1-RELATED SEQUENCE 7-l...   124   4e-26
ref|NP_566278.1| protein FAR1-related sequence 7 [Arabidopsis th...   120   6e-25
ref|NP_197397.1| protein FAR1-related sequence 12 [Arabidopsis t...   117   3e-24
ref|XP_003541641.1| PREDICTED: protein FAR1-RELATED SEQUENCE 7-l...   113   8e-23

>ref|XP_002277378.1| PREDICTED: protein FAR1-RELATED SEQUENCE 7-like [Vitis vinifera]
          Length = 823

 Score =  127 bits (320), Expect = 3e-27
 Identities = 68/160 (42%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
 Frame = -3

Query: 943  KVFTRNMFTVFSHEFCESSGCIVRKITEEEPISKYLVGFGDKNDEMNIVAFDSCNNIANC 764
            +++T  +F VF  E  +S G +  KI+EE  IS+YLV     ++E +IV  +  N    C
Sbjct: 661  RLYTLTVFKVFQKELLDSYGHLGMKISEEGIISRYLVRKCANDNEKHIVTLNGSNLNVFC 720

Query: 763  SCHMFEFEGMLCKHVLKVFQEANVVEIPPKYILNRWTMNARY--VGSCGDGARAVSQKSN 590
            SC MFEFEG+LC+H+LKVFQ  N+ +IP  YIL+RWT NA+Y  VG     +   SQ   
Sbjct: 721  SCQMFEFEGVLCRHILKVFQMVNIRDIPSCYILHRWTKNAKYGFVGDVESDSGGSSQDLK 780

Query: 589  AVDIWTLKSNAIKFVELGAASTERLNCAFNIIEEGMKNLS 470
            A+ +W L+  A  ++  GAAS ER   A  I+ EG + +S
Sbjct: 781  AMMVWGLREEACNYIGAGAASLERYKLALEIMLEGRRKIS 820


>ref|XP_004134160.1| PREDICTED: protein FAR1-RELATED SEQUENCE 7-like [Cucumis sativus]
            gi|449521221|ref|XP_004167628.1| PREDICTED: protein
            FAR1-RELATED SEQUENCE 7-like [Cucumis sativus]
          Length = 761

 Score =  124 bits (310), Expect = 4e-26
 Identities = 64/157 (40%), Positives = 92/157 (58%)
 Frame = -3

Query: 943  KVFTRNMFTVFSHEFCESSGCIVRKITEEEPISKYLVGFGDKNDEMNIVAFDSCNNIANC 764
            +++T  +F VF  E       +  KI EE  +S+YLV   + +DE  IV   S N   NC
Sbjct: 601  RLYTHAVFKVFQKELLNCYRYLGFKIYEEVALSRYLVRRCENDDEKCIVTVISTNLTVNC 660

Query: 763  SCHMFEFEGMLCKHVLKVFQEANVVEIPPKYILNRWTMNARYVGSCGDGARAVSQKSNAV 584
            SC MFE+EG+LC+H+L+VFQ   + EIPP+YIL+RWT NA Y       +    Q+   V
Sbjct: 661  SCKMFEYEGILCRHILRVFQILGISEIPPRYILHRWTRNAEYGTLQDMDSDGGPQELKTV 720

Query: 583  DIWTLKSNAIKFVELGAASTERLNCAFNIIEEGMKNL 473
             +W+L+  A K++E GA S E+   A+ I+ EG + L
Sbjct: 721  MLWSLREAACKYIEAGATSLEKYKLAYEIMREGGRKL 757


>ref|NP_566278.1| protein FAR1-related sequence 7 [Arabidopsis thaliana]
            gi|75186401|sp|Q9M8J3.1|FRS7_ARATH RecName: Full=Protein
            FAR1-RELATED SEQUENCE 7
            gi|6862929|gb|AAF30318.1|AC018907_18 unknown protein
            [Arabidopsis thaliana]
            gi|13430716|gb|AAK25980.1|AF360270_1 unknown protein
            [Arabidopsis thaliana] gi|23297525|gb|AAN12887.1| unknown
            protein [Arabidopsis thaliana]
            gi|332640844|gb|AEE74365.1| protein FAR1-related sequence
            7 [Arabidopsis thaliana]
          Length = 764

 Score =  120 bits (300), Expect = 6e-25
 Identities = 60/157 (38%), Positives = 93/157 (59%)
 Frame = -3

Query: 943  KVFTRNMFTVFSHEFCESSGCIVRKITEEEPISKYLVGFGDKNDEMNIVAFDSCNNIANC 764
            +++T  +F +F  E  +S   +  K  EE  IS++LV      +E + V F + N  A+C
Sbjct: 604  RLYTLTIFRIFQSELAQSYNYLGLKTYEEGAISRFLVRKCGNENEKHAVTFSASNLNASC 663

Query: 763  SCHMFEFEGMLCKHVLKVFQEANVVEIPPKYILNRWTMNARYVGSCGDGARAVSQKSNAV 584
            SC MFE+EG+LC+H+LKVF   ++ E+P +YIL+RWT NA +       +   SQ   A+
Sbjct: 664  SCQMFEYEGLLCRHILKVFNLLDIRELPSRYILHRWTKNAEFGFVRDVESGVTSQDLKAL 723

Query: 583  DIWTLKSNAIKFVELGAASTERLNCAFNIIEEGMKNL 473
             IW+L+  A K++E G +S E+   A+ I+ EG K L
Sbjct: 724  MIWSLREAASKYIEFGTSSLEKYKLAYEIMREGGKKL 760


>ref|NP_197397.1| protein FAR1-related sequence 12 [Arabidopsis thaliana]
            gi|122213828|sp|Q3E7I5.1|FRS12_ARATH RecName:
            Full=Protein FAR1-RELATED SEQUENCE 12
            gi|332005250|gb|AED92633.1| protein FAR1-related sequence
            12 [Arabidopsis thaliana]
          Length = 788

 Score =  117 bits (294), Expect = 3e-24
 Identities = 61/158 (38%), Positives = 94/158 (59%), Gaps = 1/158 (0%)
 Frame = -3

Query: 943  KVFTRNMFTVFSHEFCESSGCIVRKITEEEPISKYLVGFGDKNDEMNIVAFDSCNNIANC 764
            +++T  +F +F +E  +S   +  K  EE  IS++LV       E + V F + N  ++C
Sbjct: 628  RLYTLTVFRIFQNELVQSYNYLCLKTYEEGAISRFLVRKCGNESEKHAVTFSASNLNSSC 687

Query: 763  SCHMFEFEGMLCKHVLKVFQEANVVEIPPKYILNRWTMNARYVGSCGDGARAVS-QKSNA 587
            SC MFE EG+LC+H+LKVF   ++ E+P +YIL+RWT NA + G   D    VS Q   A
Sbjct: 688  SCQMFEHEGLLCRHILKVFNLLDIRELPSRYILHRWTKNAEF-GFVRDMESGVSAQDLKA 746

Query: 586  VDIWTLKSNAIKFVELGAASTERLNCAFNIIEEGMKNL 473
            + +W+L+  A K++E G +S E+   A+ I+ EG K L
Sbjct: 747  LMVWSLREAASKYIEFGTSSLEKYKLAYEIMREGGKKL 784


>ref|XP_003541641.1| PREDICTED: protein FAR1-RELATED SEQUENCE 7-like [Glycine max]
          Length = 762

 Score =  113 bits (282), Expect = 8e-23
 Identities = 57/157 (36%), Positives = 94/157 (59%)
 Frame = -3

Query: 943  KVFTRNMFTVFSHEFCESSGCIVRKITEEEPISKYLVGFGDKNDEMNIVAFDSCNNIANC 764
            +++T  +F +F  E  +    +  KI EE  +S+Y+V     + E ++V F++ N   +C
Sbjct: 602  RLYTLTVFKIFQKELLQCFSYLGFKIFEEGGLSRYMVRRCGNDMEKHVVTFNASNLSISC 661

Query: 763  SCHMFEFEGMLCKHVLKVFQEANVVEIPPKYILNRWTMNARYVGSCGDGARAVSQKSNAV 584
            SC MFE+EG+LC+HVL+VFQ   + E+P +YIL+RWT NA         + + SQ+   +
Sbjct: 662  SCQMFEYEGVLCRHVLRVFQILQLREVPSRYILHRWTRNAEDGVFPDMESWSSSQELKNL 721

Query: 583  DIWTLKSNAIKFVELGAASTERLNCAFNIIEEGMKNL 473
             +W+L+  A K+++ GA S E+   AF I+ EG + L
Sbjct: 722  MLWSLRETASKYIDAGATSFEKYKLAFEILREGGRKL 758


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