BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004439
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis v...   132   3e-29
ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subs...   128   5e-28
ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana] gi|28194047...   128   5e-28
ref|XP_002313270.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_002530842.1| dihydropyrimidinase, putative [Ricinus commu...   124   8e-27

>ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis vinifera]
           gi|296083879|emb|CBI24267.3| unnamed protein product
           [Vitis vinifera]
          Length = 536

 Score =  132 bits (333), Expect = 3e-29
 Identities = 66/86 (76%), Positives = 73/86 (84%), Gaps = 7/86 (8%)
 Frame = +2

Query: 320 EFCDV---YGDFEC----GSSSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNIKVGD 478
           EFCD    +GD  C     S+SKLLIKGGTVVNAHHQE+ADVYVE+GIIV V+PNIKVGD
Sbjct: 30  EFCDAGTGFGDSGCVVSSKSASKLLIKGGTVVNAHHQEIADVYVEDGIIVAVKPNIKVGD 89

Query: 479 DVTILDATGKYVMPGGIDPHTHLGME 556
           DVT+LDATGK+VMPGGIDPHTHL ME
Sbjct: 90  DVTVLDATGKFVMPGGIDPHTHLAME 115


>ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subsp. lyrata]
           gi|297319392|gb|EFH49814.1| dihydropyrimidinase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score =  128 bits (322), Expect = 5e-28
 Identities = 62/88 (70%), Positives = 74/88 (84%), Gaps = 4/88 (4%)
 Frame = +2

Query: 305 SNQIPEFCDVYGDF---ECG-SSSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNIKV 472
           S+   +FC   G++    CG SS+++LIKGG VVNAHHQE+ADVYVE+GIIV VQPNIKV
Sbjct: 22  SDSTTQFCSAGGEYGVGSCGVSSTRILIKGGIVVNAHHQELADVYVEDGIIVAVQPNIKV 81

Query: 473 GDDVTILDATGKYVMPGGIDPHTHLGME 556
           GD+VT+LDATGK+VMPGGIDPHTHL ME
Sbjct: 82  GDEVTVLDATGKFVMPGGIDPHTHLAME 109


>ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana]
           gi|28194047|gb|AAO33381.1|AF465755_1 dihydropyrimidine
           amidohydrolase [Arabidopsis thaliana]
           gi|9759387|dbj|BAB10038.1| dihydropyrimidinase
           [Arabidopsis thaliana] gi|332004390|gb|AED91773.1|
           pyrimidine 2 [Arabidopsis thaliana]
          Length = 531

 Score =  128 bits (322), Expect = 5e-28
 Identities = 64/88 (72%), Positives = 72/88 (81%), Gaps = 4/88 (4%)
 Frame = +2

Query: 305 SNQIPEFCDV---YGDFECG-SSSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNIKV 472
           S    +FC      G   CG SS+++LIKGGTVVNAHHQE+ADVYVENGIIV VQPNIKV
Sbjct: 22  SESTTQFCSAGRENGVGSCGVSSTRILIKGGTVVNAHHQELADVYVENGIIVAVQPNIKV 81

Query: 473 GDDVTILDATGKYVMPGGIDPHTHLGME 556
           GD+VT+LDATGK+VMPGGIDPHTHL ME
Sbjct: 82  GDEVTVLDATGKFVMPGGIDPHTHLAME 109


>ref|XP_002313270.1| predicted protein [Populus trichocarpa] gi|222849678|gb|EEE87225.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  127 bits (318), Expect = 2e-27
 Identities = 62/89 (69%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
 Frame = +2

Query: 305 SNQIPEFCDV---YGDFECG--SSSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNIK 469
           ++Q  +FC+    YG+  CG  SS+KLLIKGGTVVNAHHQEVADVYVE+GIIV V+P++K
Sbjct: 22  NSQSNQFCEAGIGYGEVGCGLSSSTKLLIKGGTVVNAHHQEVADVYVEDGIIVAVKPDLK 81

Query: 470 VGDDVTILDATGKYVMPGGIDPHTHLGME 556
           V DDV ++DATGK+VMPGGIDPHTHL ME
Sbjct: 82  VTDDVKVIDATGKFVMPGGIDPHTHLAME 110


>ref|XP_002530842.1| dihydropyrimidinase, putative [Ricinus communis]
           gi|223529606|gb|EEF31555.1| dihydropyrimidinase,
           putative [Ricinus communis]
          Length = 503

 Score =  124 bits (312), Expect = 8e-27
 Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 6/90 (6%)
 Frame = +2

Query: 305 SNQIPEFCDVYGDFECG------SSSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNI 466
           SNQ  E    YG+  CG      SSSK+LIKGGTVVNAH QEVADVYVE+G+IV V+PN+
Sbjct: 30  SNQFCEVGSGYGETGCGIQSSSSSSSKILIKGGTVVNAHSQEVADVYVEDGVIVAVKPNL 89

Query: 467 KVGDDVTILDATGKYVMPGGIDPHTHLGME 556
           KV DDV +LDATGK+VMPGGIDPHTHL M+
Sbjct: 90  KVSDDVIVLDATGKFVMPGGIDPHTHLAMD 119