BLASTX nr result
ID: Coptis24_contig00004437
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004437 (720 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002317478.1| predicted protein [Populus trichocarpa] gi|2... 108 1e-21 ref|XP_002285182.1| PREDICTED: uncharacterized protein LOC100245... 105 7e-21 ref|XP_002330749.1| predicted protein [Populus trichocarpa] gi|2... 104 2e-20 ref|XP_003543322.1| PREDICTED: uncharacterized protein LOC100820... 101 1e-19 gb|ABK28360.1| unknown [Arabidopsis thaliana] 101 1e-19 >ref|XP_002317478.1| predicted protein [Populus trichocarpa] gi|222860543|gb|EEE98090.1| predicted protein [Populus trichocarpa] Length = 73 Score = 108 bits (269), Expect = 1e-21 Identities = 47/72 (65%), Positives = 60/72 (83%) Frame = -1 Query: 504 GGCRPLGFLIGLPFALVALIISVLGAIIWILGTVISXXXXXXXXCAGLANFAVSLIKLPI 325 G C+PLGFLIGLPFALVAL++S++GA+IW++GTV+S AGLANFAVSL+KLP+ Sbjct: 2 GDCKPLGFLIGLPFALVALVLSLIGAVIWVIGTVLSCLCPCCICFAGLANFAVSLVKLPV 61 Query: 324 SIIRWFIDQIPC 289 ++RWFID IPC Sbjct: 62 KVMRWFIDLIPC 73 >ref|XP_002285182.1| PREDICTED: uncharacterized protein LOC100245332 [Vitis vinifera] gi|302142957|emb|CBI20252.3| unnamed protein product [Vitis vinifera] Length = 73 Score = 105 bits (263), Expect = 7e-21 Identities = 49/72 (68%), Positives = 59/72 (81%) Frame = -1 Query: 504 GGCRPLGFLIGLPFALVALIISVLGAIIWILGTVISXXXXXXXXCAGLANFAVSLIKLPI 325 G CRPLGFLIGLPFA +ALI+SV+GAI+WILGTV+S CAGLAN AV L+K+PI Sbjct: 2 GDCRPLGFLIGLPFAFLALILSVVGAIVWILGTVLSCLCPCCICCAGLANLAVGLVKMPI 61 Query: 324 SIIRWFIDQIPC 289 ++RWFI+QIPC Sbjct: 62 KVMRWFIEQIPC 73 >ref|XP_002330749.1| predicted protein [Populus trichocarpa] gi|222872525|gb|EEF09656.1| predicted protein [Populus trichocarpa] Length = 73 Score = 104 bits (259), Expect = 2e-20 Identities = 45/70 (64%), Positives = 60/70 (85%) Frame = -1 Query: 498 CRPLGFLIGLPFALVALIISVLGAIIWILGTVISXXXXXXXXCAGLANFAVSLIKLPISI 319 CRPLGFLIGLPFAL+AL++S++GA++W++G+V+S CAGLAN AVSL+KLP+++ Sbjct: 4 CRPLGFLIGLPFALIALVLSLIGAVVWVIGSVLSCICPCCICCAGLANLAVSLVKLPVNV 63 Query: 318 IRWFIDQIPC 289 IRWFID IPC Sbjct: 64 IRWFIDLIPC 73 >ref|XP_003543322.1| PREDICTED: uncharacterized protein LOC100820571 [Glycine max] gi|255633828|gb|ACU17275.1| unknown [Glycine max] Length = 78 Score = 101 bits (252), Expect = 1e-19 Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 2/78 (2%) Frame = -1 Query: 516 MTEEGGC--RPLGFLIGLPFALVALIISVLGAIIWILGTVISXXXXXXXXCAGLANFAVS 343 M EE GC RPLGFL+GLPFAL+ALI+S++GA+IW+LG+++S CAGLAN AVS Sbjct: 1 MGEEEGCECRPLGFLLGLPFALLALILSLVGAVIWVLGSILSCLCPCCICCAGLANLAVS 60 Query: 342 LIKLPISIIRWFIDQIPC 289 L+KLP+ ++RWF QIPC Sbjct: 61 LVKLPVKVLRWFTRQIPC 78 >gb|ABK28360.1| unknown [Arabidopsis thaliana] Length = 74 Score = 101 bits (252), Expect = 1e-19 Identities = 46/72 (63%), Positives = 56/72 (77%) Frame = -1 Query: 504 GGCRPLGFLIGLPFALVALIISVLGAIIWILGTVISXXXXXXXXCAGLANFAVSLIKLPI 325 G CRPLGFLIGLPFALVAL+++++GA+IWI+GTV+S A LANFAV LIKLPI Sbjct: 2 GDCRPLGFLIGLPFALVALVLALVGAVIWIIGTVLSCLCPCCFCFAALANFAVDLIKLPI 61 Query: 324 SIIRWFIDQIPC 289 ++RWF IPC Sbjct: 62 KVLRWFTHSIPC 73