BLASTX nr result

ID: Coptis24_contig00004436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004436
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532234.1| conserved hypothetical protein [Ricinus comm...   117   7e-25
ref|XP_002312423.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002280178.1| PREDICTED: cyclin-D1-binding protein 1 homol...   115   4e-24
emb|CAN69812.1| hypothetical protein VITISV_043108 [Vitis vinifera]   114   6e-24
ref|XP_003555267.1| PREDICTED: uncharacterized protein LOC100800...   112   2e-23

>ref|XP_002532234.1| conserved hypothetical protein [Ricinus communis]
           gi|223528091|gb|EEF30165.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 364

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/91 (64%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   VGAGPTLSSCIHASAKKVVECSLTFLREAVLSYGSRSLTH---IPPLAGTVWEACESLKK 172
           VGAGPTLSSCIHAS K+VV+CS   + E V SYGS +      +P L G VWEAC +LKK
Sbjct: 94  VGAGPTLSSCIHASVKQVVDCSFKLMMETVPSYGSSNKDFKLMVPQLTGVVWEACSALKK 153

Query: 173 TPTTNYTAIGRGITQAAVSVKDVVRELKELK 265
           TP TN TAIGR +TQ AV VKDV+RE+KELK
Sbjct: 154 TPATNITAIGRAMTQVAVLVKDVIREMKELK 184


>ref|XP_002312423.1| predicted protein [Populus trichocarpa] gi|222852243|gb|EEE89790.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   VGAGPTLSSCIHASAKKVVECSLTFLREAVLSYGSRSLTH---IPPLAGTVWEACESLKK 172
           VGAGPTLSS IHAS K+VV+CS   + E V SYGSR+      +P L G VWEAC++LKK
Sbjct: 94  VGAGPTLSSAIHASIKQVVDCSFKLMMETVSSYGSRNKDFKLVVPQLVGAVWEACDALKK 153

Query: 173 TPTTNYTAIGRGITQAAVSVKDVVRELKELK 265
           TP +N TAIGR +TQ AVSVKDV+RE+KELK
Sbjct: 154 TPASNITAIGRAMTQVAVSVKDVLREMKELK 184


>ref|XP_002280178.1| PREDICTED: cyclin-D1-binding protein 1 homolog [Vitis vinifera]
           gi|297737743|emb|CBI26944.3| unnamed protein product
           [Vitis vinifera]
          Length = 364

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/91 (65%), Positives = 70/91 (76%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   VGAGPTLSSCIHASAKKVVECSLTFLREAVLSYGSRSLTH---IPPLAGTVWEACESLKK 172
           VGAGPTLSS IHAS K+VV+ S   L+E+V SYGSR+      IP L G VWEAC +LKK
Sbjct: 94  VGAGPTLSSSIHASVKQVVDSSFRLLKESVSSYGSRNRDQKLSIPQLVGAVWEACSALKK 153

Query: 173 TPTTNYTAIGRGITQAAVSVKDVVRELKELK 265
           TP TN TAIGR +TQ AVS+KDV+RE+KELK
Sbjct: 154 TPATNITAIGRTMTQVAVSMKDVLREMKELK 184


>emb|CAN69812.1| hypothetical protein VITISV_043108 [Vitis vinifera]
          Length = 355

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/91 (65%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   VGAGPTLSSCIHASAKKVVECSLTFLREAVLSYGSRSLTH---IPPLAGTVWEACESLKK 172
           VGAGPTLSS IHAS K+VV+ S   L+E+V SYGSR+      IP L G VWEAC  LKK
Sbjct: 85  VGAGPTLSSSIHASVKQVVDSSFRLLKESVSSYGSRNRDQKLSIPQLVGAVWEACSXLKK 144

Query: 173 TPTTNYTAIGRGITQAAVSVKDVVRELKELK 265
           TP TN TAIGR +TQ AVS+KDV+RE+KELK
Sbjct: 145 TPATNITAIGRTMTQVAVSMKDVLREMKELK 175


>ref|XP_003555267.1| PREDICTED: uncharacterized protein LOC100800265 [Glycine max]
          Length = 399

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/91 (62%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   VGAGPTLSSCIHASAKKVVECSLTFLREAVLSYGSRSLT---HIPPLAGTVWEACESLKK 172
           VGAGPTLSS +HAS K+VV+ S   ++E V  YG  S      +P L G VWEAC +LKK
Sbjct: 129 VGAGPTLSSAVHASVKQVVDSSFRLMKETVSLYGYHSKDLKISVPQLVGAVWEACSALKK 188

Query: 173 TPTTNYTAIGRGITQAAVSVKDVVRELKELK 265
           TP+TN TAIGRG+TQ AVSVKDV+RE+KELK
Sbjct: 189 TPSTNITAIGRGMTQVAVSVKDVLREMKELK 219


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