BLASTX nr result
ID: Coptis24_contig00004436
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004436 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532234.1| conserved hypothetical protein [Ricinus comm... 117 7e-25 ref|XP_002312423.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-24 ref|XP_002280178.1| PREDICTED: cyclin-D1-binding protein 1 homol... 115 4e-24 emb|CAN69812.1| hypothetical protein VITISV_043108 [Vitis vinifera] 114 6e-24 ref|XP_003555267.1| PREDICTED: uncharacterized protein LOC100800... 112 2e-23 >ref|XP_002532234.1| conserved hypothetical protein [Ricinus communis] gi|223528091|gb|EEF30165.1| conserved hypothetical protein [Ricinus communis] Length = 364 Score = 117 bits (294), Expect = 7e-25 Identities = 59/91 (64%), Positives = 68/91 (74%), Gaps = 3/91 (3%) Frame = +2 Query: 2 VGAGPTLSSCIHASAKKVVECSLTFLREAVLSYGSRSLTH---IPPLAGTVWEACESLKK 172 VGAGPTLSSCIHAS K+VV+CS + E V SYGS + +P L G VWEAC +LKK Sbjct: 94 VGAGPTLSSCIHASVKQVVDCSFKLMMETVPSYGSSNKDFKLMVPQLTGVVWEACSALKK 153 Query: 173 TPTTNYTAIGRGITQAAVSVKDVVRELKELK 265 TP TN TAIGR +TQ AV VKDV+RE+KELK Sbjct: 154 TPATNITAIGRAMTQVAVLVKDVIREMKELK 184 >ref|XP_002312423.1| predicted protein [Populus trichocarpa] gi|222852243|gb|EEE89790.1| predicted protein [Populus trichocarpa] Length = 362 Score = 117 bits (293), Expect = 1e-24 Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 3/91 (3%) Frame = +2 Query: 2 VGAGPTLSSCIHASAKKVVECSLTFLREAVLSYGSRSLTH---IPPLAGTVWEACESLKK 172 VGAGPTLSS IHAS K+VV+CS + E V SYGSR+ +P L G VWEAC++LKK Sbjct: 94 VGAGPTLSSAIHASIKQVVDCSFKLMMETVSSYGSRNKDFKLVVPQLVGAVWEACDALKK 153 Query: 173 TPTTNYTAIGRGITQAAVSVKDVVRELKELK 265 TP +N TAIGR +TQ AVSVKDV+RE+KELK Sbjct: 154 TPASNITAIGRAMTQVAVSVKDVLREMKELK 184 >ref|XP_002280178.1| PREDICTED: cyclin-D1-binding protein 1 homolog [Vitis vinifera] gi|297737743|emb|CBI26944.3| unnamed protein product [Vitis vinifera] Length = 364 Score = 115 bits (288), Expect = 4e-24 Identities = 60/91 (65%), Positives = 70/91 (76%), Gaps = 3/91 (3%) Frame = +2 Query: 2 VGAGPTLSSCIHASAKKVVECSLTFLREAVLSYGSRSLTH---IPPLAGTVWEACESLKK 172 VGAGPTLSS IHAS K+VV+ S L+E+V SYGSR+ IP L G VWEAC +LKK Sbjct: 94 VGAGPTLSSSIHASVKQVVDSSFRLLKESVSSYGSRNRDQKLSIPQLVGAVWEACSALKK 153 Query: 173 TPTTNYTAIGRGITQAAVSVKDVVRELKELK 265 TP TN TAIGR +TQ AVS+KDV+RE+KELK Sbjct: 154 TPATNITAIGRTMTQVAVSMKDVLREMKELK 184 >emb|CAN69812.1| hypothetical protein VITISV_043108 [Vitis vinifera] Length = 355 Score = 114 bits (286), Expect = 6e-24 Identities = 60/91 (65%), Positives = 69/91 (75%), Gaps = 3/91 (3%) Frame = +2 Query: 2 VGAGPTLSSCIHASAKKVVECSLTFLREAVLSYGSRSLTH---IPPLAGTVWEACESLKK 172 VGAGPTLSS IHAS K+VV+ S L+E+V SYGSR+ IP L G VWEAC LKK Sbjct: 85 VGAGPTLSSSIHASVKQVVDSSFRLLKESVSSYGSRNRDQKLSIPQLVGAVWEACSXLKK 144 Query: 173 TPTTNYTAIGRGITQAAVSVKDVVRELKELK 265 TP TN TAIGR +TQ AVS+KDV+RE+KELK Sbjct: 145 TPATNITAIGRTMTQVAVSMKDVLREMKELK 175 >ref|XP_003555267.1| PREDICTED: uncharacterized protein LOC100800265 [Glycine max] Length = 399 Score = 112 bits (281), Expect = 2e-23 Identities = 57/91 (62%), Positives = 68/91 (74%), Gaps = 3/91 (3%) Frame = +2 Query: 2 VGAGPTLSSCIHASAKKVVECSLTFLREAVLSYGSRSLT---HIPPLAGTVWEACESLKK 172 VGAGPTLSS +HAS K+VV+ S ++E V YG S +P L G VWEAC +LKK Sbjct: 129 VGAGPTLSSAVHASVKQVVDSSFRLMKETVSLYGYHSKDLKISVPQLVGAVWEACSALKK 188 Query: 173 TPTTNYTAIGRGITQAAVSVKDVVRELKELK 265 TP+TN TAIGRG+TQ AVSVKDV+RE+KELK Sbjct: 189 TPSTNITAIGRGMTQVAVSVKDVLREMKELK 219