BLASTX nr result
ID: Coptis24_contig00004433
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004433 (1543 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding prot... 437 e-120 ref|XP_002325488.1| predicted protein [Populus trichocarpa] gi|2... 431 e-118 ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus... 422 e-116 ref|XP_002879883.1| tRNA-binding region domain-containing protei... 421 e-115 ref|XP_003526802.1| PREDICTED: probable methionyl-tRNA synthetas... 412 e-112 >ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding protein C30C2.04-like [Vitis vinifera] gi|297736480|emb|CBI25351.3| unnamed protein product [Vitis vinifera] Length = 392 Score = 437 bits (1124), Expect = e-120 Identities = 236/406 (58%), Positives = 285/406 (70%) Frame = -3 Query: 1529 KQKQAILSSLCKHLSLDPKSLSDQSVEGSDVKSLFVNILNSSGKDGHLENNEVLNWITFA 1350 ++KQ+I+SSLCKHLSLDPK D VE +D+KSL NIL SSG+ ++EV WI+FA Sbjct: 13 RRKQSIVSSLCKHLSLDPKIFLDSIVE-NDIKSLCANILKSSGR-APKNSDEVSKWISFA 70 Query: 1349 DSFVKNSDGCNELLKKLNEDLIVKSVLLGDGFNPSAADVVVFSAVHLFVIGLSATERKKY 1170 +S+ +S C L +NE+L KSVL+GDG PS ADV+VFS +H FVIGL TER+K Sbjct: 71 ESYPVDSKACFGALHVINEELAEKSVLMGDGLKPSEADVIVFSLLHPFVIGLPNTERQKL 130 Query: 1169 VNVLRWMDYIQNKEDLLELFEIVPVEKTCFDPPVLXXXXXXXXXXXXXXXVQGAKTDEKS 990 +++RWM+YIQ+KE+ ELF + +E + P VQ K + + Sbjct: 131 PHLVRWMEYIQSKENFGELFPKILLENDVIELPKPKIVVKLEADPNAKKTVQSTKNADNT 190 Query: 989 KVDSNSKKTDELEAISNAEMNDKLETDTXXXXXXXXXXXXXXXKVTEEKKKAPEKESTAK 810 + + NSKK+D ++ ++ E+KKK PEKE+ K Sbjct: 191 EANPNSKKSDVVKKVTGNNA------------------------AAEQKKKLPEKEAVEK 226 Query: 809 DVEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDALLNRR 630 D EVS+SLLNIQVGLIRKAWKHPSADSLLVEEID+GD +RQVVSGLAK+CSP+ L NRR Sbjct: 227 DKEVSISLLNIQVGLIRKAWKHPSADSLLVEEIDVGDAKLRQVVSGLAKYCSPEELTNRR 286 Query: 629 VALITNVKPGKLRDVASSGLVLCASNSEQTVVEPLLPPEGAKIGERVTFSGHDEKPEDVL 450 V LITNVKPGKLRDV S GLVLCASN + T VEPLLPPEGAKIGERV+FSG++ KPEDVL Sbjct: 287 VVLITNVKPGKLRDVMSEGLVLCASNEDHTGVEPLLPPEGAKIGERVSFSGNEGKPEDVL 346 Query: 449 NPKKKQLEKITPHLHTDDQGVATFKGIPFMTSAGPCTSSIPNASIK 312 NPKKKQLEKITPHL TDD+GVATFKGIPFMTS GPCT SIP ASIK Sbjct: 347 NPKKKQLEKITPHLFTDDKGVATFKGIPFMTSGGPCTCSIPKASIK 392 >ref|XP_002325488.1| predicted protein [Populus trichocarpa] gi|222862363|gb|EEE99869.1| predicted protein [Populus trichocarpa] Length = 425 Score = 431 bits (1108), Expect = e-118 Identities = 241/410 (58%), Positives = 287/410 (70%), Gaps = 1/410 (0%) Frame = -3 Query: 1538 MESKQKQAILSSLCKHLSLDPKSLSDQSVEGSDVKSLFVNILNSSGKDG-HLENNEVLNW 1362 M ++KQ I S+L KHLSL P++ S E D+KSL++NIL SSGK E+ EV+ W Sbjct: 43 MGLQRKQIISSALSKHLSLSPEAPSGDLGE-YDIKSLYLNILKSSGKRSPSKESEEVMKW 101 Query: 1361 ITFADSFVKNSDGCNELLKKLNEDLIVKSVLLGDGFNPSAADVVVFSAVHLFVIGLSATE 1182 I+FA+ F +S C + L LN+DL + SVLLG+G PS AD++VFS +H VIGLS E Sbjct: 102 ISFAEIFPIDSPTCFDALSGLNKDLALNSVLLGNGLTPSEADIIVFSVIHSSVIGLSHLE 161 Query: 1181 RKKYVNVLRWMDYIQNKEDLLELFEIVPVEKTCFDPPVLXXXXXXXXXXXXXXXVQGAKT 1002 R+K V+V+RWMDYIQNK D +LFE V +EK F+ +QG K Sbjct: 162 REKLVHVMRWMDYIQNKVDFGKLFEKVLLEKGAFE-------------------LQGIKG 202 Query: 1001 DEKSKVDSNSKKTDELEAISNAEMNDKLETDTXXXXXXXXXXXXXXXKVTEEKKKAPEKE 822 D KS++D+N+KKT + N + +K E D +EKKK E E Sbjct: 203 DAKSEIDTNAKKT-----VENTKNKEKSEADLSMKKSDNKSTGKKES--AQEKKKPSETE 255 Query: 821 STAKDVEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDAL 642 + KD E+SVSLLNIQVGLIRKAWKHPSADSLLVEEID+GD +RQVVSGLAK SPD L Sbjct: 256 AGEKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDIGDAKLRQVVSGLAKFYSPDDL 315 Query: 641 LNRRVALITNVKPGKLRDVASSGLVLCASNSEQTVVEPLLPPEGAKIGERVTFSGHDEKP 462 NRRV LITNVKPGKLRDV S GLVLCASN + T+VEPLLPPEGAK+GERV+F G D KP Sbjct: 316 TNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTIVEPLLPPEGAKVGERVSFLGIDGKP 375 Query: 461 EDVLNPKKKQLEKITPHLHTDDQGVATFKGIPFMTSAGPCTSSIPNASIK 312 EDVLNPKKKQLEKITP+L +DD+GVATFKGIPFMTS GPCTSSIP ASIK Sbjct: 376 EDVLNPKKKQLEKITPNLFSDDKGVATFKGIPFMTSGGPCTSSIPKASIK 425 >ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus communis] gi|223540008|gb|EEF41586.1| methionyl-tRNA synthetase, putative [Ricinus communis] Length = 391 Score = 422 bits (1086), Expect = e-116 Identities = 233/408 (57%), Positives = 278/408 (68%), Gaps = 2/408 (0%) Frame = -3 Query: 1529 KQKQAILSSLCKHLSLDP-KSLSDQSVEGSDVKSLFVNILNSSGK-DGHLENNEVLNWIT 1356 K+ Q I S+L KHLSL SLS+ G D+KSL+VNIL SSGK EN+EV+ WI Sbjct: 11 KRNQLIASALSKHLSLHSGTSLSE--CRGDDIKSLYVNILKSSGKWSQQKENDEVMKWID 68 Query: 1355 FADSFVKNSDGCNELLKKLNEDLIVKSVLLGDGFNPSAADVVVFSAVHLFVIGLSATERK 1176 FA+SF ++ C L LN+ L +KSVLLG+G PS ADV+VFS +H VIGLS +E++ Sbjct: 69 FAESFPVDTSACFNALNGLNQHLALKSVLLGNGVTPSEADVIVFSVIHSSVIGLSHSEKE 128 Query: 1175 KYVNVLRWMDYIQNKEDLLELFEIVPVEKTCFDPPVLXXXXXXXXXXXXXXXVQGAKTDE 996 K V+RWMDYIQ+KE ++ E + +EK F+P +Q K E Sbjct: 129 KLTQVMRWMDYIQHKETFVDPAERILLEKPAFEPLSTKAVAKIEVDSNVKKSMQSTKNTE 188 Query: 995 KSKVDSNSKKTDELEAISNAEMNDKLETDTXXXXXXXXXXXXXXXKVTEEKKKAPEKEST 816 K + + KK+D + ++ E +EKKK + E Sbjct: 189 KPDAEHSRKKSDAGKKVTEKES-------------------------VQEKKKPAQTEPA 223 Query: 815 AKDVEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDALLN 636 K+ EVSVSLLNIQVGLIRKAWKHPSADSLLVEEID+G+ +RQVVSGLAK C+PD L+N Sbjct: 224 EKEKEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKFCTPDELMN 283 Query: 635 RRVALITNVKPGKLRDVASSGLVLCASNSEQTVVEPLLPPEGAKIGERVTFSGHDEKPED 456 R V LITNVKPGKLRDVAS GLVLCASN + +VVEPLLPPEGAKIGERV+FSG D KPED Sbjct: 284 RHVVLITNVKPGKLRDVASEGLVLCASNGDHSVVEPLLPPEGAKIGERVSFSGFDGKPED 343 Query: 455 VLNPKKKQLEKITPHLHTDDQGVATFKGIPFMTSAGPCTSSIPNASIK 312 VLNPKKKQLEKITP+L TDD+GVATFKGIPFMTS GPCTSSIP ASIK Sbjct: 344 VLNPKKKQLEKITPNLFTDDKGVATFKGIPFMTSGGPCTSSIPKASIK 391 >ref|XP_002879883.1| tRNA-binding region domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297325722|gb|EFH56142.1| tRNA-binding region domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 389 Score = 421 bits (1081), Expect = e-115 Identities = 231/411 (56%), Positives = 282/411 (68%), Gaps = 2/411 (0%) Frame = -3 Query: 1538 MESKQKQAILSSLCKHLSLDPKSLSDQSVEGSDVKSLFVNILNSSGKDGHLENNEVLNWI 1359 M+SK KQ ILS+LCKH SLDP+ + + SDV++L+ N+L +SGK+ +N+EVL W+ Sbjct: 1 MDSKTKQMILSALCKHFSLDPEPFLGGAGD-SDVRTLYSNVLKASGKEVSAQNDEVLKWL 59 Query: 1358 TFADSFVKNSDGCNELLKKLNEDLIVKSVLLGDGFNPSAADVVVFSAVHLFVIGLSATER 1179 FA+ F NS C L+KLN +L KSVLLG+G PSAADV VFSA+H V+GLS + + Sbjct: 60 DFAEGFSANSKDCYAALEKLNLELATKSVLLGNGLTPSAADVAVFSALHSSVLGLSDSNK 119 Query: 1178 KKYVNVLRWMDYIQNKEDLLELFEIVPVEKTCFDPPVLXXXXXXXXXXXXXXXVQGAKTD 999 +K +V+RW++YIQNKE+L LF +PV+ FD V +G K Sbjct: 120 EKVPHVIRWVNYIQNKEELSTLFAPIPVKLPEFDFEVSKPAIKVEANSNTKKAAEGVKPV 179 Query: 998 EKSKVDSN--SKKTDELEAISNAEMNDKLETDTXXXXXXXXXXXXXXXKVTEEKKKAPEK 825 +KS +KKT+ E NA + +EKKK E Sbjct: 180 DKSDAQPQPITKKTEPEEPKKNATKEKDAK---------------------KEKKKPAES 218 Query: 824 ESTAKDVEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDA 645 E K+ E+SVSLLNIQVGLIRKAWKHPSADSLLVEEID+G+ +RQVVSGLAK C+PD Sbjct: 219 EPAKKEAELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEDKVRQVVSGLAKFCNPDD 278 Query: 644 LLNRRVALITNVKPGKLRDVASSGLVLCASNSEQTVVEPLLPPEGAKIGERVTFSGHDEK 465 L NR VALITNVKPGKLRDV S GLVLCAS+ + +VVEPLLPP GAK GERV+FSG + K Sbjct: 279 LTNRLVALITNVKPGKLRDVMSQGLVLCASSEDHSVVEPLLPPAGAKPGERVSFSGIEGK 338 Query: 464 PEDVLNPKKKQLEKITPHLHTDDQGVATFKGIPFMTSAGPCTSSIPNASIK 312 PEDVLNPKKKQLEKITP L+TD+ GVAT+KGIPFMTSAGPCTSSIP A+IK Sbjct: 339 PEDVLNPKKKQLEKITPGLYTDENGVATYKGIPFMTSAGPCTSSIPKATIK 389 >ref|XP_003526802.1| PREDICTED: probable methionyl-tRNA synthetase-like [Glycine max] Length = 390 Score = 412 bits (1058), Expect = e-112 Identities = 226/410 (55%), Positives = 282/410 (68%), Gaps = 1/410 (0%) Frame = -3 Query: 1538 MESKQKQAILSSLCKHLSLDPKSLSDQSVEGSDVKSLFVNILNSSGKDGHLENNEVLNWI 1359 +ES+ K +L+ L K+LSLDP S+ SD+KSL++NI+ SG G ++EVL W+ Sbjct: 4 VESRSKSVVLA-LSKYLSLDP-SVVPADTSDSDIKSLYLNIIAVSGH-GVNHSDEVLKWV 60 Query: 1358 TFADSFVKNSDGCNELLKKLNEDLIVKSVLLGDGFNPSAADVVVFSAVHLFVIGLSATER 1179 FA++F D C E L +LN++L KSVLLG+G PS ADV+V+S +H +I LS T + Sbjct: 61 AFAEAFPVALDACFENLNRLNDELSEKSVLLGNGLKPSEADVIVYSVIHSSLINLSDTNK 120 Query: 1178 KKYVNVLRWMDYIQNKEDLLELFEIVPVEKTCFDPPVLXXXXXXXXXXXXXXXVQGAKTD 999 +K +VLRWMDYIQ+K++ + LFE + ++K F+PPV Q K Sbjct: 121 EKLPHVLRWMDYIQHKQEFVGLFEKILLQKPGFEPPVTQPVGAVEADLKSNKTEQSVKNV 180 Query: 998 EKSKVDSNSKKTD-ELEAISNAEMNDKLETDTXXXXXXXXXXXXXXXKVTEEKKKAPEKE 822 KS+VDS+ K E +A DK + T+ K K +KE Sbjct: 181 NKSEVDSSKDKNKAEGKATGGKSTGDK--------------------EPTKAKAKPADKE 220 Query: 821 STAKDVEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDAL 642 K+ EVSVSLLNIQVGLIRKAWKHPSADSLLVEEID+G+ +RQVVSGLAK+C+PD L Sbjct: 221 VAEKENEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEDKVRQVVSGLAKYCNPDEL 280 Query: 641 LNRRVALITNVKPGKLRDVASSGLVLCASNSEQTVVEPLLPPEGAKIGERVTFSGHDEKP 462 NRRV LITNVKPGKLRDV S GLVLCAS+ T+VEPLLPPEG++IGER++FSG D KP Sbjct: 281 TNRRVVLITNVKPGKLRDVMSQGLVLCASDEGPTIVEPLLPPEGSQIGERISFSGIDGKP 340 Query: 461 EDVLNPKKKQLEKITPHLHTDDQGVATFKGIPFMTSAGPCTSSIPNASIK 312 EDVLNPKKKQL+KITPHL TDD+GVAT+KGIPFMTS GPCTSSIP A+IK Sbjct: 341 EDVLNPKKKQLDKITPHLFTDDKGVATYKGIPFMTSGGPCTSSIPRATIK 390