BLASTX nr result
ID: Coptis24_contig00004432
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004432
(1014 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis ... 587 e-165
ref|XP_002894659.1| clathrin adaptor complexes medium subunit fa... 572 e-161
gb|ADC53238.1| clathrin-associated adaptor complexes medium subu... 571 e-160
ref|NP_001242747.1| uncharacterized protein LOC100799191 [Glycin... 568 e-160
ref|XP_003521657.1| PREDICTED: AP-3 complex subunit mu-1-like [G... 566 e-159
>ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis vinifera]
gi|296089804|emb|CBI39623.3| unnamed protein product
[Vitis vinifera]
Length = 415
Score = 587 bits (1514), Expect = e-165
Identities = 282/340 (82%), Positives = 316/340 (92%), Gaps = 4/340 (1%)
Frame = +3
Query: 6 MLQCIFLVSDSGEVMLEKQLTGHRVDRSICSWFWDQSIS----SKLPPVIASPTHYLFQI 173
MLQCIFL+SDSGEVMLEKQLTGHRVDRSIC WFW+Q++S +KLPPVIASPTHY+FQI
Sbjct: 1 MLQCIFLLSDSGEVMLEKQLTGHRVDRSICDWFWEQTVSQADSTKLPPVIASPTHYIFQI 60
Query: 174 GREGITFLACTQVEMAPLMALEFLSRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 353
REGITFLACTQVEM PLM +EFL RVADVLS+YLGGLNED+IKDNF+IVYELLDEMIDN
Sbjct: 61 TREGITFLACTQVEMPPLMGIEFLCRVADVLSDYLGGLNEDVIKDNFVIVYELLDEMIDN 120
Query: 354 GFPLTTEPNILREMIAPPNIVSKVLSVVTGNGSNVSNTLPGATASSIPWRTMDLKHAKNE 533
GFPLTTEPNILREMIA PNIVSKVL VVTGN SNVSNTLPGATAS +PWR+ + KHA NE
Sbjct: 121 GFPLTTEPNILREMIALPNIVSKVLGVVTGNSSNVSNTLPGATASCVPWRSTEPKHANNE 180
Query: 534 VYVDLVEEMDAIISRDGMLVKCEIYGEVQVKCQLSGLPDLTLSFANPSVLNDVRFHPCVR 713
VYVDL+EEMDA+I+RDG+LVKCEIYGEV+V LSGLPDLTLSFANPS+LNDVRFHPCVR
Sbjct: 181 VYVDLLEEMDAVINRDGILVKCEIYGEVEVNSHLSGLPDLTLSFANPSILNDVRFHPCVR 240
Query: 714 FRPWESHQVLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDAGTCRLSVLVGTRNDSG 893
FRPWES+ +LSFVPPDGQFKLMSYRVKKL++TPIYVKPQL+SDAGTCRLSVLVG R+D G
Sbjct: 241 FRPWESNNILSFVPPDGQFKLMSYRVKKLRSTPIYVKPQLTSDAGTCRLSVLVGIRSDPG 300
Query: 894 KTVDSIMVQFRLPPCVASADLTSNHGTVNILADKTCTWSI 1013
KT+DS+ VQF+LPPC+ SA+L+SNHGTV+ILA+KTC+WSI
Sbjct: 301 KTIDSVTVQFQLPPCILSANLSSNHGTVSILANKTCSWSI 340
>ref|XP_002894659.1| clathrin adaptor complexes medium subunit family protein [Arabidopsis
lyrata subsp. lyrata] gi|297340501|gb|EFH70918.1|
clathrin adaptor complexes medium subunit family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 415
Score = 572 bits (1475), Expect = e-161
Identities = 276/340 (81%), Positives = 309/340 (90%), Gaps = 4/340 (1%)
Frame = +3
Query: 6 MLQCIFLVSDSGEVMLEKQLTGHRVDRSICSWFWDQSISS----KLPPVIASPTHYLFQI 173
MLQCIFL+SDSGEVMLEKQLTGHRVDRSIC+WFWDQSIS KL PVIASPTHYLFQI
Sbjct: 1 MLQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWDQSISQGDSFKLLPVIASPTHYLFQI 60
Query: 174 GREGITFLACTQVEMAPLMALEFLSRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 353
R+GIT LAC+QVEM PLMA+EFL RVADVLSEYLGGLNEDL+KDNFIIVYELLDEMIDN
Sbjct: 61 VRDGITLLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLVKDNFIIVYELLDEMIDN 120
Query: 354 GFPLTTEPNILREMIAPPNIVSKVLSVVTGNGSNVSNTLPGATASSIPWRTMDLKHAKNE 533
GFPLTTEP+ILREMIAPPN+VSK+LSVVTGN SNVS+TLP S +PWR D K++ NE
Sbjct: 121 GFPLTTEPSILREMIAPPNLVSKMLSVVTGNASNVSDTLPSGAGSCVPWRPTDPKYSSNE 180
Query: 534 VYVDLVEEMDAIISRDGMLVKCEIYGEVQVKCQLSGLPDLTLSFANPSVLNDVRFHPCVR 713
VYVDLVEEMDAI++RDG LVKCEIYGEVQ+ QLSG PDLTLSFANPS+L D+RFHPCVR
Sbjct: 181 VYVDLVEEMDAIVNRDGELVKCEIYGEVQMNSQLSGFPDLTLSFANPSILEDMRFHPCVR 240
Query: 714 FRPWESHQVLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDAGTCRLSVLVGTRNDSG 893
FRPWESHQVLSFVPPDG+FKLMSYRVKKLKNTP+YVKPQ++SDAGTCR+SVLVG R+D G
Sbjct: 241 FRPWESHQVLSFVPPDGEFKLMSYRVKKLKNTPVYVKPQITSDAGTCRISVLVGIRSDPG 300
Query: 894 KTVDSIMVQFRLPPCVASADLTSNHGTVNILADKTCTWSI 1013
KT++SI + F+LP CV+SADL+SNHGTV IL++KTCTW+I
Sbjct: 301 KTIESITLSFQLPHCVSSADLSSNHGTVTILSNKTCTWTI 340
>gb|ADC53238.1| clathrin-associated adaptor complexes medium subunit [Gossypium
hirsutum]
Length = 415
Score = 571 bits (1471), Expect = e-160
Identities = 275/340 (80%), Positives = 306/340 (90%), Gaps = 4/340 (1%)
Frame = +3
Query: 6 MLQCIFLVSDSGEVMLEKQLTGHRVDRSICSWFWDQSISS----KLPPVIASPTHYLFQI 173
MLQCIFL+SDSGEVMLEKQLTGHRVDRSIC WFWD IS K PVIASPTHYLFQ+
Sbjct: 1 MLQCIFLLSDSGEVMLEKQLTGHRVDRSICDWFWDHVISQGDSFKSQPVIASPTHYLFQV 60
Query: 174 GREGITFLACTQVEMAPLMALEFLSRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 353
REGITFLACTQVEM PLM +EFL RV+DVLS+YLGGLNED+IKDNF+IVYELLDEMIDN
Sbjct: 61 VREGITFLACTQVEMPPLMGIEFLCRVSDVLSDYLGGLNEDVIKDNFVIVYELLDEMIDN 120
Query: 354 GFPLTTEPNILREMIAPPNIVSKVLSVVTGNGSNVSNTLPGATASSIPWRTMDLKHAKNE 533
GFPLTTE NILREMIAPPNIVSKVLSVVTGN SNVS+TLPGAT S IPWR + K+A NE
Sbjct: 121 GFPLTTEANILREMIAPPNIVSKVLSVVTGNSSNVSDTLPGATRSCIPWRAAEPKYANNE 180
Query: 534 VYVDLVEEMDAIISRDGMLVKCEIYGEVQVKCQLSGLPDLTLSFANPSVLNDVRFHPCVR 713
VYVDLVEEMDA+I+RDG LVKCE+YGEV+V LSGLPDLTLSFANPS+L+DVRFHPCVR
Sbjct: 181 VYVDLVEEMDAVINRDGALVKCEVYGEVRVNSHLSGLPDLTLSFANPSILDDVRFHPCVR 240
Query: 714 FRPWESHQVLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDAGTCRLSVLVGTRNDSG 893
FRPWESHQVLSFVPPDG+FKLMSYR+KKLK+TP+YVKPQL+SDAG CR++VLVG RND G
Sbjct: 241 FRPWESHQVLSFVPPDGEFKLMSYRIKKLKSTPLYVKPQLTSDAGKCRVNVLVGIRNDPG 300
Query: 894 KTVDSIMVQFRLPPCVASADLTSNHGTVNILADKTCTWSI 1013
KT+DSI ++F+LPPC+ SADL SNHGTVNIL +K C+W+I
Sbjct: 301 KTIDSITLEFQLPPCILSADLNSNHGTVNILGNKICSWTI 340
>ref|NP_001242747.1| uncharacterized protein LOC100799191 [Glycine max]
gi|255641304|gb|ACU20929.1| unknown [Glycine max]
Length = 415
Score = 568 bits (1464), Expect = e-160
Identities = 273/340 (80%), Positives = 311/340 (91%), Gaps = 4/340 (1%)
Frame = +3
Query: 6 MLQCIFLVSDSGEVMLEKQLTGHRVDRSICSWFWDQSISSKLP----PVIASPTHYLFQI 173
MLQCIFL+SDSGEVMLEKQL+GHRVDRSIC+WFWDQ+IS P PVIASPTHYLFQ+
Sbjct: 1 MLQCIFLLSDSGEVMLEKQLSGHRVDRSICAWFWDQAISQPDPFKQQPVIASPTHYLFQV 60
Query: 174 GREGITFLACTQVEMAPLMALEFLSRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 353
REGITFLACTQVEM PLMA+EFL RVADVL++YLGGLNEDLIKDNF+IVYELLDEMIDN
Sbjct: 61 FREGITFLACTQVEMPPLMAIEFLCRVADVLNDYLGGLNEDLIKDNFVIVYELLDEMIDN 120
Query: 354 GFPLTTEPNILREMIAPPNIVSKVLSVVTGNGSNVSNTLPGATASSIPWRTMDLKHAKNE 533
GFPLTTEPNIL+EMIAPPNIVSKVLSVVTG+ SNVS+TLP ATAS +PWRT D K+A NE
Sbjct: 121 GFPLTTEPNILQEMIAPPNIVSKVLSVVTGSSSNVSDTLPVATASLVPWRTADTKYANNE 180
Query: 534 VYVDLVEEMDAIISRDGMLVKCEIYGEVQVKCQLSGLPDLTLSFANPSVLNDVRFHPCVR 713
VYVDLVEEMDA I+RDG+LVKCEI GEVQV ++GLPDLTLSFANPS+L+DVRFHPCVR
Sbjct: 181 VYVDLVEEMDATINRDGVLVKCEINGEVQVNSHITGLPDLTLSFANPSILDDVRFHPCVR 240
Query: 714 FRPWESHQVLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDAGTCRLSVLVGTRNDSG 893
++PWES+Q+LSFVPPDGQFKLMSYR++KLKNTPIYVKPQL+SD G CR+S+LVG RND G
Sbjct: 241 YQPWESNQILSFVPPDGQFKLMSYRIRKLKNTPIYVKPQLTSDGGACRVSILVGIRNDPG 300
Query: 894 KTVDSIMVQFRLPPCVASADLTSNHGTVNILADKTCTWSI 1013
KT+D++ +QF+LP C+ SADLTSN+G VNILA+KTC+WSI
Sbjct: 301 KTIDNVTLQFQLPSCILSADLTSNYGIVNILANKTCSWSI 340
>ref|XP_003521657.1| PREDICTED: AP-3 complex subunit mu-1-like [Glycine max]
Length = 415
Score = 567 bits (1460), Expect = e-159
Identities = 275/340 (80%), Positives = 309/340 (90%), Gaps = 4/340 (1%)
Frame = +3
Query: 6 MLQCIFLVSDSGEVMLEKQLTGHRVDRSICSWFWDQSISS----KLPPVIASPTHYLFQI 173
MLQCIFL+SDSGEVMLEKQL+GHRVDRSIC+WFWDQ+IS K PVIASPTHYLFQ+
Sbjct: 1 MLQCIFLLSDSGEVMLEKQLSGHRVDRSICAWFWDQAISQPDSFKQQPVIASPTHYLFQV 60
Query: 174 GREGITFLACTQVEMAPLMALEFLSRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 353
REGITFLACTQVEM PLMA+EFL RVADVL++YLGGLNEDLIKDNFIIVYELLDEMIDN
Sbjct: 61 FREGITFLACTQVEMPPLMAIEFLCRVADVLNDYLGGLNEDLIKDNFIIVYELLDEMIDN 120
Query: 354 GFPLTTEPNILREMIAPPNIVSKVLSVVTGNGSNVSNTLPGATASSIPWRTMDLKHAKNE 533
GFPLTTEPNIL+EMIAPPNIVSKVLSVVTG+ SNVS+TLPGATAS +PWRT D K+A NE
Sbjct: 121 GFPLTTEPNILQEMIAPPNIVSKVLSVVTGSSSNVSDTLPGATASLVPWRTADTKYANNE 180
Query: 534 VYVDLVEEMDAIISRDGMLVKCEIYGEVQVKCQLSGLPDLTLSFANPSVLNDVRFHPCVR 713
VYVDLVEEMDA I+RDG+LVKCEI GEVQV ++GLPDLTLSFANPS+L+DVRFHPCVR
Sbjct: 181 VYVDLVEEMDATINRDGVLVKCEINGEVQVNSHITGLPDLTLSFANPSILDDVRFHPCVR 240
Query: 714 FRPWESHQVLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDAGTCRLSVLVGTRNDSG 893
+RPWES+Q+LSFVPPDG+FKLMSYRV KLKNTPIYVKPQ +SD G CR+SVLVG RND G
Sbjct: 241 YRPWESNQILSFVPPDGRFKLMSYRVGKLKNTPIYVKPQFTSDGGRCRVSVLVGIRNDPG 300
Query: 894 KTVDSIMVQFRLPPCVASADLTSNHGTVNILADKTCTWSI 1013
KT+D++ VQF+LP C+ SADL+SN+G VNILA+K C+WSI
Sbjct: 301 KTIDNVTVQFQLPSCILSADLSSNYGIVNILANKICSWSI 340