BLASTX nr result
ID: Coptis24_contig00004430
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004430 (1235 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cu... 412 e-113 ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cu... 412 e-113 ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|19470... 404 e-110 gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indi... 404 e-110 gb|AFW89454.1| 40S ribosomal protein SA [Zea mays] 403 e-110 >ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus] Length = 309 Score = 412 bits (1059), Expect = e-113 Identities = 211/282 (74%), Positives = 228/282 (80%), Gaps = 8/282 (2%) Frame = -3 Query: 1116 QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 937 QK DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTW+KL LAARVIVGIE Sbjct: 12 QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIE 71 Query: 936 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 757 NPQDIIVQSAR YGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQ SF+EPRLLILTDPRT Sbjct: 72 NPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRT 131 Query: 756 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 577 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMV QMRG + Sbjct: 132 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 191 Query: 576 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGADTQWSNQGVDTQWTADV 397 G +WDVMVDLFFYREPEEAK++E +E A PDY GA S+ QW + Sbjct: 192 RAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD-----QWAGQI 246 Query: 396 GDAQWN-PDLIPSQTVTPAV------VEYTQ-AAVSQEADEW 295 DAQW PDLIP+ P V VE+TQ V+ +D W Sbjct: 247 SDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGW 288 >ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus] Length = 309 Score = 412 bits (1059), Expect = e-113 Identities = 211/282 (74%), Positives = 228/282 (80%), Gaps = 8/282 (2%) Frame = -3 Query: 1116 QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 937 QK DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTW+KL LAARVIVGIE Sbjct: 12 QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIE 71 Query: 936 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 757 NPQDIIVQSAR YGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQ SF+EPRLLILTDPRT Sbjct: 72 NPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRT 131 Query: 756 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 577 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMV QMRG + Sbjct: 132 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 191 Query: 576 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGADTQWSNQGVDTQWTADV 397 G +WDVMVDLFFYREPEEAK++E +E A PDY GA S+ QW + Sbjct: 192 RAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD-----QWAGQI 246 Query: 396 GDAQWN-PDLIPSQTVTPAV------VEYTQ-AAVSQEADEW 295 DAQW PDLIP+ P V VE+TQ V+ +D W Sbjct: 247 SDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGW 288 >ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|194708106|gb|ACF88137.1| unknown [Zea mays] gi|195626134|gb|ACG34897.1| 40S ribosomal protein SA [Zea mays] Length = 308 Score = 404 bits (1037), Expect = e-110 Identities = 210/278 (75%), Positives = 228/278 (82%), Gaps = 15/278 (5%) Frame = -3 Query: 1116 QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 937 QK +DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTWDKL LAARVIV IE Sbjct: 15 QKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAARVIVAIE 74 Query: 936 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 757 NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT Sbjct: 75 NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 134 Query: 756 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 577 DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKG+ SIGCLFWLLARMV QMRG + Sbjct: 135 DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTI 194 Query: 576 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAA-PGLQGADTQWSNQGVDTQWTAD 400 LPG +W+VMVDLFFYR+PEEAK+QE +E A P++AA QGAD QW QWT+D Sbjct: 195 LPGHKWEVMVDLFFYRDPEEAKEQE-EEAAAAPEFAAVTDYQGAD-QWGGD----QWTSD 248 Query: 399 VG-------DAQWN--PDLIPS-----QTVTPAVVEYT 328 V A W P +P+ QTV P V+ T Sbjct: 249 VAAPPVAPTGADWGAAPASVPTGDGWDQTVAPVPVDGT 286 >gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indica Group] Length = 310 Score = 404 bits (1037), Expect = e-110 Identities = 203/274 (74%), Positives = 220/274 (80%) Frame = -3 Query: 1116 QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 937 Q+ +DIQMMLAA VHLGTKNCD+QMERYV+KRRSDGIFIINLGKTW+KL LAARVIV IE Sbjct: 16 QREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVAIE 75 Query: 936 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 757 NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT Sbjct: 76 NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 135 Query: 756 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 577 DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMV QMRG + Sbjct: 136 DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTI 195 Query: 576 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGADTQWSNQGVDTQWTADV 397 LPG +WDVMVDLFFYR+PEEAK+QE +E P+YAA GA T + Sbjct: 196 LPGHKWDVMVDLFFYRDPEEAKEQEEEEAAVGPEYAAVAEYGAAP-----------TDNW 244 Query: 396 GDAQWNPDLIPSQTVTPAVVEYTQAAVSQEADEW 295 GD QW ++ P E+ A A+ W Sbjct: 245 GDQQWGGEVQPPALPAAPTGEWGAAPAPVAAEGW 278 >gb|AFW89454.1| 40S ribosomal protein SA [Zea mays] Length = 308 Score = 403 bits (1036), Expect = e-110 Identities = 210/278 (75%), Positives = 228/278 (82%), Gaps = 15/278 (5%) Frame = -3 Query: 1116 QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 937 QK +DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTWDKL LAARVIV IE Sbjct: 15 QKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAARVIVAIE 74 Query: 936 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 757 NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT Sbjct: 75 NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 134 Query: 756 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 577 DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKG+ SIGCLFWLLARMV QMRG + Sbjct: 135 DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTI 194 Query: 576 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAA-PGLQGADTQWSNQGVDTQWTAD 400 LPG +W+VMVDLFFYR+PEEAK+QE +E A P++AA QGAD QW QWT+D Sbjct: 195 LPGHKWEVMVDLFFYRDPEEAKEQE-EEAAAAPEFAAVTDYQGAD-QWGGD----QWTSD 248 Query: 399 VG-------DAQWN--PDLIPS-----QTVTPAVVEYT 328 V A W P +P+ QTV P V+ T Sbjct: 249 VAAPPVAPTGADWGAAPAPVPTGDGWDQTVAPVPVDGT 286