BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004430
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   412   e-113
ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   412   e-113
ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|19470...   404   e-110
gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indi...   404   e-110
gb|AFW89454.1| 40S ribosomal protein SA [Zea mays]                    403   e-110

>ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  412 bits (1059), Expect = e-113
 Identities = 211/282 (74%), Positives = 228/282 (80%), Gaps = 8/282 (2%)
 Frame = -3

Query: 1116 QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 937
            QK  DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTW+KL LAARVIVGIE
Sbjct: 12   QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIE 71

Query: 936  NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 757
            NPQDIIVQSAR YGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQ SF+EPRLLILTDPRT
Sbjct: 72   NPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRT 131

Query: 756  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 577
            DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMV QMRG +
Sbjct: 132  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 191

Query: 576  LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGADTQWSNQGVDTQWTADV 397
              G +WDVMVDLFFYREPEEAK++E +E  A PDY      GA    S+     QW   +
Sbjct: 192  RAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD-----QWAGQI 246

Query: 396  GDAQWN-PDLIPSQTVTPAV------VEYTQ-AAVSQEADEW 295
             DAQW  PDLIP+    P V      VE+TQ   V+  +D W
Sbjct: 247  SDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGW 288


>ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  412 bits (1059), Expect = e-113
 Identities = 211/282 (74%), Positives = 228/282 (80%), Gaps = 8/282 (2%)
 Frame = -3

Query: 1116 QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 937
            QK  DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTW+KL LAARVIVGIE
Sbjct: 12   QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIE 71

Query: 936  NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 757
            NPQDIIVQSAR YGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQ SF+EPRLLILTDPRT
Sbjct: 72   NPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRT 131

Query: 756  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 577
            DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMV QMRG +
Sbjct: 132  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 191

Query: 576  LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGADTQWSNQGVDTQWTADV 397
              G +WDVMVDLFFYREPEEAK++E +E  A PDY      GA    S+     QW   +
Sbjct: 192  RAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD-----QWAGQI 246

Query: 396  GDAQWN-PDLIPSQTVTPAV------VEYTQ-AAVSQEADEW 295
             DAQW  PDLIP+    P V      VE+TQ   V+  +D W
Sbjct: 247  SDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGW 288


>ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|194708106|gb|ACF88137.1|
            unknown [Zea mays] gi|195626134|gb|ACG34897.1| 40S
            ribosomal protein SA [Zea mays]
          Length = 308

 Score =  404 bits (1037), Expect = e-110
 Identities = 210/278 (75%), Positives = 228/278 (82%), Gaps = 15/278 (5%)
 Frame = -3

Query: 1116 QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 937
            QK +DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTWDKL LAARVIV IE
Sbjct: 15   QKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAARVIVAIE 74

Query: 936  NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 757
            NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT
Sbjct: 75   NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 134

Query: 756  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 577
            DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKG+ SIGCLFWLLARMV QMRG +
Sbjct: 135  DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTI 194

Query: 576  LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAA-PGLQGADTQWSNQGVDTQWTAD 400
            LPG +W+VMVDLFFYR+PEEAK+QE +E  A P++AA    QGAD QW       QWT+D
Sbjct: 195  LPGHKWEVMVDLFFYRDPEEAKEQE-EEAAAAPEFAAVTDYQGAD-QWGGD----QWTSD 248

Query: 399  VG-------DAQWN--PDLIPS-----QTVTPAVVEYT 328
            V         A W   P  +P+     QTV P  V+ T
Sbjct: 249  VAAPPVAPTGADWGAAPASVPTGDGWDQTVAPVPVDGT 286


>gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indica Group]
          Length = 310

 Score =  404 bits (1037), Expect = e-110
 Identities = 203/274 (74%), Positives = 220/274 (80%)
 Frame = -3

Query: 1116 QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 937
            Q+ +DIQMMLAA VHLGTKNCD+QMERYV+KRRSDGIFIINLGKTW+KL LAARVIV IE
Sbjct: 16   QREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVAIE 75

Query: 936  NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 757
            NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT
Sbjct: 76   NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 135

Query: 756  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 577
            DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMV QMRG +
Sbjct: 136  DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTI 195

Query: 576  LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGADTQWSNQGVDTQWTADV 397
            LPG +WDVMVDLFFYR+PEEAK+QE +E    P+YAA    GA             T + 
Sbjct: 196  LPGHKWDVMVDLFFYRDPEEAKEQEEEEAAVGPEYAAVAEYGAAP-----------TDNW 244

Query: 396  GDAQWNPDLIPSQTVTPAVVEYTQAAVSQEADEW 295
            GD QW  ++ P         E+  A     A+ W
Sbjct: 245  GDQQWGGEVQPPALPAAPTGEWGAAPAPVAAEGW 278


>gb|AFW89454.1| 40S ribosomal protein SA [Zea mays]
          Length = 308

 Score =  403 bits (1036), Expect = e-110
 Identities = 210/278 (75%), Positives = 228/278 (82%), Gaps = 15/278 (5%)
 Frame = -3

Query: 1116 QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 937
            QK +DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTWDKL LAARVIV IE
Sbjct: 15   QKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAARVIVAIE 74

Query: 936  NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 757
            NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT
Sbjct: 75   NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 134

Query: 756  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 577
            DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKG+ SIGCLFWLLARMV QMRG +
Sbjct: 135  DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTI 194

Query: 576  LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAA-PGLQGADTQWSNQGVDTQWTAD 400
            LPG +W+VMVDLFFYR+PEEAK+QE +E  A P++AA    QGAD QW       QWT+D
Sbjct: 195  LPGHKWEVMVDLFFYRDPEEAKEQE-EEAAAAPEFAAVTDYQGAD-QWGGD----QWTSD 248

Query: 399  VG-------DAQWN--PDLIPS-----QTVTPAVVEYT 328
            V         A W   P  +P+     QTV P  V+ T
Sbjct: 249  VAAPPVAPTGADWGAAPAPVPTGDGWDQTVAPVPVDGT 286