BLASTX nr result

ID: Coptis24_contig00004427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004427
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272982.1| PREDICTED: mitochondrial import receptor sub...    64   1e-07
emb|CAN79350.1| hypothetical protein VITISV_006999 [Vitis vinifera]    64   1e-07
ref|XP_004170651.1| PREDICTED: mitochondrial import receptor sub...    63   1e-07
gb|ABB55375.1| unknown [Solanum tuberosum]                             59   2e-06
ref|XP_002528355.1| conserved hypothetical protein [Ricinus comm...    59   2e-06

>ref|XP_002272982.1| PREDICTED: mitochondrial import receptor subunit TOM22 homolog 2
            [Vitis vinifera] gi|297744210|emb|CBI37180.3| unnamed
            protein product [Vitis vinifera]
          Length = 100

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
 Frame = -3

Query: 1130 RNKK--GVLAKISNTVSESPIVQRGKQTASDAGTVGWKLLRSTGKAAWLAGXXXXXXXXX 957
            RN K  G+L+++SN++S+SPI+ +G+Q ASDA  V  KL +STGKAAW+AG         
Sbjct: 13   RNPKNEGILSRVSNSISQSPILFQGRQAASDAAVVAKKLFKSTGKAAWIAGTTFLILVVP 72

Query: 956  XXXTMDRXXXXXXXXXXXAHLLG 888
                MDR           A LLG
Sbjct: 73   LIIEMDREQQMNELEMQQASLLG 95


>emb|CAN79350.1| hypothetical protein VITISV_006999 [Vitis vinifera]
          Length = 95

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 34/85 (40%), Positives = 48/85 (56%)
 Frame = -3

Query: 1142 PMASRNKKGVLAKISNTVSESPIVQRGKQTASDAGTVGWKLLRSTGKAAWLAGXXXXXXX 963
            P +S   + +L+++SN++S+SPI+ +G+Q ASDA  V  KL +STGKAAW+AG       
Sbjct: 6    PHSSPTLRSILSRVSNSISQSPILFQGRQAASDAAVVAKKLFKSTGKAAWIAGTTFLILV 65

Query: 962  XXXXXTMDRXXXXXXXXXXXAHLLG 888
                  MDR           A LLG
Sbjct: 66   VPLIIEMDREQQMNELEMQQASLLG 90


>ref|XP_004170651.1| PREDICTED: mitochondrial import receptor subunit TOM22 homolog 2-like
            [Cucumis sativus]
          Length = 103

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 41/95 (43%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
 Frame = -3

Query: 1139 MASRNKK-----------GVLAKISNTVSESPIVQRGKQTASDAGTVGWKLLRSTGKAAW 993
            MASR  K           G+L+++S +VS+S IV+R K TASDA  V  KLLRSTGKAAW
Sbjct: 1    MASRGNKRPSITNGDDNLGILSRVSRSVSDSQIVRRAKSTASDAAFVSKKLLRSTGKAAW 60

Query: 992  LAGXXXXXXXXXXXXTMDRXXXXXXXXXXXAHLLG 888
            +AG             MDR           A LLG
Sbjct: 61   IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLG 95


>gb|ABB55375.1| unknown [Solanum tuberosum]
          Length = 103

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = -3

Query: 1118 GVLAKISNTVSESPIVQRGKQTASDAGTVGWKLLRSTGKAAWLAGXXXXXXXXXXXXTMD 939
            G++++ S+++SESPIV +GK+ ASD   V  KL +STGKAAW+AG             MD
Sbjct: 19   GIISRFSSSISESPIVYQGKRAASDVAFVAKKLFKSTGKAAWIAGTTFLILVVPLIIEMD 78

Query: 938  RXXXXXXXXXXXAHLLG 888
            R           A LLG
Sbjct: 79   RDAQFTELEMQQASLLG 95


>ref|XP_002528355.1| conserved hypothetical protein [Ricinus communis]
            gi|223532223|gb|EEF34027.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 100

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 33/84 (39%), Positives = 44/84 (52%)
 Frame = -3

Query: 1139 MASRNKKGVLAKISNTVSESPIVQRGKQTASDAGTVGWKLLRSTGKAAWLAGXXXXXXXX 960
            + S + +G++AK + TVS+S IV   KQ A+DAG V  +L +STGKAAW+AG        
Sbjct: 9    IGSSSDEGIVAKFTRTVSDSAIVNTAKQAANDAGYVAKRLAKSTGKAAWIAGTTFLILVV 68

Query: 959  XXXXTMDRXXXXXXXXXXXAHLLG 888
                 MDR             LLG
Sbjct: 69   PLIIEMDREQQFTELELQQQSLLG 92


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