BLASTX nr result

ID: Coptis24_contig00004412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004412
         (1817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275742.1| PREDICTED: 5-dehydro-2-deoxygluconokinase [V...   528   e-147
ref|XP_002307634.1| predicted protein [Populus trichocarpa] gi|2...   488   e-135
ref|XP_002521000.1| ribokinase, putative [Ricinus communis] gi|2...   484   e-134
ref|XP_004146987.1| PREDICTED: 2-dehydro-3-deoxygluconokinase-li...   479   e-132
ref|XP_003541336.1| PREDICTED: fructokinase-1-like [Glycine max]      467   e-129

>ref|XP_002275742.1| PREDICTED: 5-dehydro-2-deoxygluconokinase [Vitis vinifera]
            gi|297735518|emb|CBI17958.3| unnamed protein product
            [Vitis vinifera]
          Length = 459

 Score =  528 bits (1361), Expect = e-147
 Identities = 274/463 (59%), Positives = 340/463 (73%), Gaps = 2/463 (0%)
 Frame = -3

Query: 1653 SNLVQPHRIITGFFPPISVKIGVIYAKCSEVSCAKNCSSSSLNDFVEENDEKARKDIIIK 1474
            S+ + PH  +    P I  +   +  K  ++S   +C ++          +     + +K
Sbjct: 5    SSPISPHNALQNPRPAIRRRFTALNCKGIQLSVPSHCYTAG--------GDCTSGGVALK 56

Query: 1473 DADVATLGNLCXXXXXXXXXXXXXSFEERRAYMDKLSSLKPDKKYWEAGGNCNMVIAAAR 1294
              DVATLGNLC             SF +R+AYM++L++  PDKKYWEAGGNCNM IAA R
Sbjct: 57   SVDVATLGNLCVDLVLNVPELPPASFLDRKAYMERLAASPPDKKYWEAGGNCNMAIAAKR 116

Query: 1293 IGLSCLSLGHVGDEIYGRFLLDVLHDEGIGMVEMSEDTDA-NAGNAAYETLLCWVLVDPL 1117
            +GL C+++GHVG+EIYG FLLDVLHDEGI  V M+EDTD  ++ +A+YETLLCWVLVDPL
Sbjct: 117  LGLCCVTIGHVGNEIYGDFLLDVLHDEGIDTVGMNEDTDVVDSASASYETLLCWVLVDPL 176

Query: 1116 HRHGFCSRADFSKDPAFSWMSKLSGEVKSAIKRSKILFCNGYAFDELSPSLLVSALDYAM 937
             RHGFCSRADFSK+PAFSWMSKLS EVK AI++SKILFCNGY FDELSPSL++SALDYA+
Sbjct: 177  QRHGFCSRADFSKEPAFSWMSKLSREVKMAIRKSKILFCNGYGFDELSPSLIISALDYAV 236

Query: 936  EVGTSIFFDPGPRGRTLNIGTADQRRALDKYLRMSDVLLLTSDEAESLTGITNPILAGQE 757
            EVGTS+FFDPGPRG++L++GT +Q+RAL ++L MSDVLLLTSDEAESLTGI NPILAGQE
Sbjct: 237  EVGTSVFFDPGPRGKSLSVGTPEQQRALGQFLTMSDVLLLTSDEAESLTGIGNPILAGQE 296

Query: 756  LLRKGMRAKWVIVKMGAKGSILITKSSVSAAPAFKVNVIDTVGCGDSFVAAIAFGFLHKM 577
            LLRKGMR KWVIVKMG+KGSILI+ SS+S APAFKVNVIDTVGCGDSFVAAIAFGF+H +
Sbjct: 297  LLRKGMRTKWVIVKMGSKGSILISLSSISCAPAFKVNVIDTVGCGDSFVAAIAFGFIHNL 356

Query: 576  LTXXXXXXXXXXXXXXXXGCGAGRSVATLGKVIQLLKDSNLNDD-NFLSVFLDENSHIPE 400
             T                GCGAGR+VA L +VI+L++ SNLN+D  F +  LD+N    +
Sbjct: 357  PTVNTLAIANAVGAATAMGCGAGRNVANLEQVIELMRASNLNEDATFWNELLDDNLDAQQ 416

Query: 399  VILLSRASTYGSNGHLKHVSLKNVISELLSKLKAILEKRMVPS 271
            +  LS+ +  GSN  L  V+L+ V+SE L KLK+   K +VPS
Sbjct: 417  ITFLSKTAINGSNNQLHRVALQKVVSESLCKLKSARIKGIVPS 459


>ref|XP_002307634.1| predicted protein [Populus trichocarpa] gi|222857083|gb|EEE94630.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  488 bits (1257), Expect = e-135
 Identities = 249/390 (63%), Positives = 299/390 (76%), Gaps = 1/390 (0%)
 Frame = -3

Query: 1467 DVATLGNLCXXXXXXXXXXXXXSFEERRAYMDKLSSLKPDKKYWEAGGNCNMVIAAARIG 1288
            DVATLGNLC             S E   AYM +LS   PDKKYWEAGGNCNM IAAAR+G
Sbjct: 2    DVATLGNLCVDIVLNVPKLPPRSREASFAYMQELSKSPPDKKYWEAGGNCNMAIAAARLG 61

Query: 1287 LSCLSLGHVGDEIYGRFLLDVLHDEGIGMVEMSEDTD-ANAGNAAYETLLCWVLVDPLHR 1111
            L C ++GHVGDEIYG+FLLDVL +EGI MV MSED D  ++ NA+YETLLCWVLVDPL R
Sbjct: 62   LHCATIGHVGDEIYGQFLLDVLREEGISMVGMSEDGDIVDSSNASYETLLCWVLVDPLQR 121

Query: 1110 HGFCSRADFSKDPAFSWMSKLSGEVKSAIKRSKILFCNGYAFDELSPSLLVSALDYAMEV 931
            HGFCSRADF +DPAFSWM+KL+ EVK AIK+SKILFCNGY FDELSP+L++ ALDYA+EV
Sbjct: 122  HGFCSRADFCEDPAFSWMTKLTEEVKMAIKQSKILFCNGYGFDELSPALIMLALDYAVEV 181

Query: 930  GTSIFFDPGPRGRTLNIGTADQRRALDKYLRMSDVLLLTSDEAESLTGITNPILAGQELL 751
            GTS+FFDPGPRG++L  GT ++R+AL   L+MSDVLLLTSDEAESLTGI NPILAGQELL
Sbjct: 182  GTSVFFDPGPRGKSLLTGTPEERQALSHLLKMSDVLLLTSDEAESLTGIGNPILAGQELL 241

Query: 750  RKGMRAKWVIVKMGAKGSILITKSSVSAAPAFKVNVIDTVGCGDSFVAAIAFGFLHKMLT 571
            + G+R KWVI+KMG++GSIL+T SS+S APAFKVNVIDTVGCGDSFVAAIAFG++H +  
Sbjct: 242  KNGIRTKWVIIKMGSRGSILVTMSSISCAPAFKVNVIDTVGCGDSFVAAIAFGYIHNIPL 301

Query: 570  XXXXXXXXXXXXXXXXGCGAGRSVATLGKVIQLLKDSNLNDDNFLSVFLDENSHIPEVIL 391
                            GCGAGR+VATL KVI+L++ SN+N+D+     L ++    E+  
Sbjct: 302  VNTLAIANAVGAATAMGCGAGRNVATLEKVIELMRASNINEDDEFWNELVKDMDTGEITF 361

Query: 390  LSRASTYGSNGHLKHVSLKNVISELLSKLK 301
            LS+    G N  + HV+L+ V+SELL KL+
Sbjct: 362  LSKMVINGRNNQVNHVALQKVVSELLPKLE 391


>ref|XP_002521000.1| ribokinase, putative [Ricinus communis] gi|223539837|gb|EEF41417.1|
            ribokinase, putative [Ricinus communis]
          Length = 474

 Score =  484 bits (1246), Expect = e-134
 Identities = 250/399 (62%), Positives = 309/399 (77%), Gaps = 5/399 (1%)
 Frame = -3

Query: 1479 IKDADVATLGNLCXXXXXXXXXXXXXSFEERRAYMDKLSSLKPDKKYWEAGGNCNMVIAA 1300
            +K  DV+TLGNLC             S + R+AYM++LS+  P K+YWEAGGNCNM IAA
Sbjct: 70   VKIIDVSTLGNLCVDIVLNVPKLPPRSPDARQAYMEQLSTSPPHKQYWEAGGNCNMAIAA 129

Query: 1299 ARIGLSCLSLGHVGDEIYGRFLLDVLHDEGIGMVEMSEDTDA-NAGNAAYETLLCWVLVD 1123
            AR+GL C ++GHVG+EIYG+FLLDVL DEGI MV MS++TDA ++ +A+YETLLCWVLVD
Sbjct: 130  ARLGLRCATIGHVGNEIYGKFLLDVLRDEGITMVGMSDNTDAIDSSSASYETLLCWVLVD 189

Query: 1122 PLHRHGFCSRADFSKDPAFSWMSKLSGEVKSAIKRSKILFCNGYAFDELSPSLLVSALDY 943
            PL RHGFCSRADF+K+PAFSWMSKLS +VK AIK+SK+LFCNGY FDELSPSL++SA+DY
Sbjct: 190  PLQRHGFCSRADFTKEPAFSWMSKLSAKVKMAIKQSKVLFCNGYGFDELSPSLIISAVDY 249

Query: 942  AMEVGTSIFFDPGPRGRTLNIGTADQRRALDKYLRMSDVLLLTSDEAESLTGITNPILAG 763
            A+EVGTSIFFDPGPRG++L+ GT ++R AL   L+MSDVLLLTSDEAESLTGI +P+LAG
Sbjct: 250  AVEVGTSIFFDPGPRGKSLSTGTPEERDALHHLLKMSDVLLLTSDEAESLTGIGDPLLAG 309

Query: 762  QELLRKGMRAKWVIVKMGAKGSILITKSSVSAAPAFKVNVIDTVGCGDSFVAAIAFGFLH 583
            Q LLR G+R KWVIVKMG+KGSIL++ S++S APAFKVNVIDTVGCGDSFVAAIAFGF+H
Sbjct: 310  QGLLRNGLRTKWVIVKMGSKGSILVSISNISCAPAFKVNVIDTVGCGDSFVAAIAFGFIH 369

Query: 582  KMLTXXXXXXXXXXXXXXXXGCGAGRSVATLGKVIQLLKDSNLN-DDNFLSVFLDENSHI 406
             M                  GCGAGR+VATL KVI+L++ SN+N DD F +    +N + 
Sbjct: 370  NMPLVNTLTIANAVGAATAMGCGAGRNVATLEKVIELVRGSNINEDDAFWAELFVKNLNA 429

Query: 405  PEVILLSRASTYG---SNGHLKHVSLKNVISELLSKLKA 298
             E+  LS+    G   SN  L  V+++ V+SELL KL++
Sbjct: 430  QEIAFLSKMVINGSKSSNKGLNRVAIQKVVSELLPKLES 468


>ref|XP_004146987.1| PREDICTED: 2-dehydro-3-deoxygluconokinase-like [Cucumis sativus]
            gi|449517273|ref|XP_004165670.1| PREDICTED:
            2-dehydro-3-deoxygluconokinase-like [Cucumis sativus]
          Length = 480

 Score =  479 bits (1233), Expect = e-132
 Identities = 237/393 (60%), Positives = 300/393 (76%), Gaps = 1/393 (0%)
 Frame = -3

Query: 1476 KDADVATLGNLCXXXXXXXXXXXXXSFEERRAYMDKLSSLKPDKKYWEAGGNCNMVIAAA 1297
            KD DVATLGNLC             + +ERRAYM++LSS  P+K YWEAGGNCNM IAAA
Sbjct: 78   KDIDVATLGNLCVDIVLNVPSLPPENDDERRAYMERLSSSPPEKCYWEAGGNCNMAIAAA 137

Query: 1296 RIGLSCLSLGHVGDEIYGRFLLDVLHDEGIGMVEMSEDTDANAGNAAYETLLCWVLVDPL 1117
            R+GL C ++GHVG+EIYG+FLLDVLH+EGI  V MS+ +         ETLLCWVLVDPL
Sbjct: 138  RLGLCCATIGHVGNEIYGQFLLDVLHEEGISTVRMSDASCGVRSKTTCETLLCWVLVDPL 197

Query: 1116 HRHGFCSRADFSKDPAFSWMSKLSGEVKSAIKRSKILFCNGYAFDELSPSLLVSALDYAM 937
             RHGFCSRADFSK+PAFSW+++LS  VK  ++RSK+LFCNGY FDELSP+L+ S +DYA+
Sbjct: 198  QRHGFCSRADFSKEPAFSWITQLSEGVKINVRRSKVLFCNGYGFDELSPNLITSIVDYAL 257

Query: 936  EVGTSIFFDPGPRGRTLNIGTADQRRALDKYLRMSDVLLLTSDEAESLTGITNPILAGQE 757
            EVGTSIFFDPGPRG++L++GT D+R AL+ +LRMSD LLLTSDEAESLTGI +PILAG E
Sbjct: 258  EVGTSIFFDPGPRGKSLSVGTPDERSALNHFLRMSDALLLTSDEAESLTGIQDPILAGNE 317

Query: 756  LLRKGMRAKWVIVKMGAKGSILITKSSVSAAPAFKVNVIDTVGCGDSFVAAIAFGFLHKM 577
            LL+KG+R KWVIVKMG++GSILITK+S+S APAFKVNV+DTVGCGDSFVAAIA+G++H +
Sbjct: 318  LLKKGVRTKWVIVKMGSRGSILITKTSISCAPAFKVNVVDTVGCGDSFVAAIAYGYIHNL 377

Query: 576  LTXXXXXXXXXXXXXXXXGCGAGRSVATLGKVIQLLKDSNLNDD-NFLSVFLDENSHIPE 400
             T                GCGAGRSVATL KV++L+  +N N+D +F +  L EN    +
Sbjct: 378  PTVDALTIANAVGAATAMGCGAGRSVATLEKVLELMMKANTNEDSDFWNKLLSENLESQD 437

Query: 399  VILLSRASTYGSNGHLKHVSLKNVISELLSKLK 301
            + L+ +++   +N  + ++ L+NV+S LL  L+
Sbjct: 438  ITLMLKSNVDRNNRSINYIMLQNVVSRLLPMLE 470


>ref|XP_003541336.1| PREDICTED: fructokinase-1-like [Glycine max]
          Length = 472

 Score =  467 bits (1202), Expect = e-129
 Identities = 250/428 (58%), Positives = 302/428 (70%), Gaps = 4/428 (0%)
 Frame = -3

Query: 1572 CSEVSCAKNCSSSSLNDFVEENDEKARKDIIIKDADVATLGNLCXXXXXXXXXXXXXSFE 1393
            C  +  A    SSSL   V  N  K          DVATL NLC             S  
Sbjct: 44   CRSLEIAVPSPSSSLPSNVGPNSWK--------HVDVATLSNLCVDIVLNVPQLPPPSPL 95

Query: 1392 ERRAYMDKLSSLKPDKKYWEAGGNCNMVIAAARIGLSCLSLGHVGDEIYGRFLLDVLHDE 1213
            +R+A+MD+L+   PDKKYWEAGGNCNM IAAAR+GL+C+S+GHVG+EIYG+FL DVL DE
Sbjct: 96   QRKAFMDRLAQSPPDKKYWEAGGNCNMAIAAARLGLNCISIGHVGNEIYGKFLSDVLRDE 155

Query: 1212 GIGMVEMSEDTD---ANAGNAAYETLLCWVLVDPLHRHGFCSRADFSKDPAFSWMSKLSG 1042
            GIG+V M  + D   +++G+A+ ETLLCWVLVDPL RHGFCSRADF ++P   WMSKLS 
Sbjct: 156  GIGLVGMITNDDIVNSSSGSASCETLLCWVLVDPLQRHGFCSRADFCEEPILHWMSKLSS 215

Query: 1041 EVKSAIKRSKILFCNGYAFDELSPSLLVSALDYAMEVGTSIFFDPGPRGRTLNIGTADQR 862
            EVK AIK SK+LFCNGY FDELSP  L+SA++YA+EVGTSIFFDPGPRG++L+ GT D++
Sbjct: 216  EVKMAIKNSKVLFCNGYGFDELSPGALLSAMEYAVEVGTSIFFDPGPRGKSLSTGTPDEQ 275

Query: 861  RALDKYLRMSDVLLLTSDEAESLTGITNPILAGQELLRKGMRAKWVIVKMGAKGSILITK 682
            RAL++ LRMSDVLLLTS+EAE LTGI +PILAGQE L++G+R KWVIVKMG+KGSILIT 
Sbjct: 276  RALNQLLRMSDVLLLTSEEAEELTGINDPILAGQEFLKRGIRTKWVIVKMGSKGSILITA 335

Query: 681  SSVSAAPAFKVNVIDTVGCGDSFVAAIAFGFLHKMLTXXXXXXXXXXXXXXXXGCGAGRS 502
            SSV+ APAFKVNVIDTVGCGDSFVAAI +GF+H M                  GCGAGR+
Sbjct: 336  SSVACAPAFKVNVIDTVGCGDSFVAAIVYGFIHNMPLVNTLAIANAVGAATAMGCGAGRN 395

Query: 501  VATLGKVIQLLKDSNLN-DDNFLSVFLDENSHIPEVILLSRASTYGSNGHLKHVSLKNVI 325
            VATL  V+ +L+ SNL+ DD F    L++N    E+  LS     G+   L  VS   V 
Sbjct: 396  VATLENVVHILRSSNLSEDDEFWIEILEKNVVAQEITYLSNVMN-GNKNRLNLVSFDKVA 454

Query: 324  SELLSKLK 301
            SELL KL+
Sbjct: 455  SELLPKLE 462


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