BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004406
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523609.1| PREDICTED: protein DCL, chloroplastic-like [...   221   2e-55
ref|XP_002877497.1| hypothetical protein ARALYDRAFT_905861 [Arab...   217   3e-54
ref|XP_002283006.1| PREDICTED: protein DCL, chloroplastic [Vitis...   217   3e-54
ref|XP_002326952.1| predicted protein [Populus trichocarpa] gi|2...   214   3e-53
ref|XP_004141276.1| PREDICTED: protein DCL, chloroplastic-like [...   214   3e-53

>ref|XP_003523609.1| PREDICTED: protein DCL, chloroplastic-like [Glycine max]
          Length = 203

 Score =  221 bits (563), Expect = 2e-55
 Identities = 102/135 (75%), Positives = 117/135 (86%)
 Frame = +1

Query: 217 SSPPHEDNSPEYRQWKDREAEILQDIEPIVSLAKQILHTDRYADGDWLSTEDEKVVVEKL 396
           SS    ++ P+YR+WKD+E EIL DIEPIV LAK ILH+ RY DG  L+ EDEK +VEKL
Sbjct: 69  SSEARWEDDPDYRKWKDKEKEILSDIEPIVVLAKDILHSRRYMDGARLNEEDEKAIVEKL 128

Query: 397 LAYHPHSQDKLGSGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKCLRAYIRDKYPA 576
           LAYHPHS+DK+G GL+SIMVDRHPQ+++SRCLFVVRTDGGWIDFSYQKCLR YIRDKYP 
Sbjct: 129 LAYHPHSEDKIGCGLESIMVDRHPQYRQSRCLFVVRTDGGWIDFSYQKCLREYIRDKYPT 188

Query: 577 YAERFIREHFKRGSG 621
           +AERFIREHFKRGSG
Sbjct: 189 HAERFIREHFKRGSG 203


>ref|XP_002877497.1| hypothetical protein ARALYDRAFT_905861 [Arabidopsis lyrata subsp.
           lyrata] gi|297323335|gb|EFH53756.1| hypothetical protein
           ARALYDRAFT_905861 [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score =  217 bits (553), Expect = 3e-54
 Identities = 102/139 (73%), Positives = 120/139 (86%), Gaps = 5/139 (3%)
 Frame = +1

Query: 217 SSPPHEDNS-----PEYRQWKDREAEILQDIEPIVSLAKQILHTDRYADGDWLSTEDEKV 381
           ++ P  DNS     P+YR+WK+ EAEIL+DIEPI  LAK+ILH+DRY DG+ L  EDEK+
Sbjct: 64  TTSPAVDNSWRFEDPDYRKWKNLEAEILRDIEPIALLAKEILHSDRYLDGERLEFEDEKI 123

Query: 382 VVEKLLAYHPHSQDKLGSGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKCLRAYIR 561
           V+EKLLAYHP+S+DK+G GLD IMVDRHPQF+ SRCLFVVRTDGGWIDFSYQKCLRAY+R
Sbjct: 124 VMEKLLAYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVR 183

Query: 562 DKYPAYAERFIREHFKRGS 618
           DKYP++AERFIREHFKR S
Sbjct: 184 DKYPSHAERFIREHFKRAS 202


>ref|XP_002283006.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|302142270|emb|CBI19473.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  217 bits (553), Expect = 3e-54
 Identities = 98/128 (76%), Positives = 114/128 (89%)
 Frame = +1

Query: 238 NSPEYRQWKDREAEILQDIEPIVSLAKQILHTDRYADGDWLSTEDEKVVVEKLLAYHPHS 417
           + P++R+WK+RE EIL+DIEPI SL K+ILH+DRY DG+ L+ EDEK VVEKLL YHPHS
Sbjct: 67  DDPDFRKWKNREEEILRDIEPITSLTKEILHSDRYMDGERLTAEDEKAVVEKLLIYHPHS 126

Query: 418 QDKLGSGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKCLRAYIRDKYPAYAERFIR 597
           +DK+G GLD IMVDRHPQF+ SRCLFVVRTDGGWIDFSYQKCLRAYIRDKYP++A+RFIR
Sbjct: 127 EDKIGCGLDCIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYIRDKYPSHADRFIR 186

Query: 598 EHFKRGSG 621
            HFKR SG
Sbjct: 187 VHFKRSSG 194


>ref|XP_002326952.1| predicted protein [Populus trichocarpa] gi|222835267|gb|EEE73702.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  214 bits (545), Expect = 3e-53
 Identities = 98/123 (79%), Positives = 110/123 (89%)
 Frame = +1

Query: 250 YRQWKDREAEILQDIEPIVSLAKQILHTDRYADGDWLSTEDEKVVVEKLLAYHPHSQDKL 429
           YRQWKD EA+I +DIEPI  LAK+I+H+DRY DG+ L+ EDEKVV E+LLAYHP+S DK+
Sbjct: 73  YRQWKDEEADIWRDIEPITHLAKEIIHSDRYMDGEQLTDEDEKVVAERLLAYHPNSDDKI 132

Query: 430 GSGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKCLRAYIRDKYPAYAERFIREHFK 609
           G GLDSIMVDRHPQFK SRCLFVVRTDGGWIDFSYQKCLRAYIR KYP +AERFI+EHFK
Sbjct: 133 GCGLDSIMVDRHPQFKNSRCLFVVRTDGGWIDFSYQKCLRAYIRSKYPTHAERFIKEHFK 192

Query: 610 RGS 618
           RGS
Sbjct: 193 RGS 195


>ref|XP_004141276.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
          Length = 196

 Score =  214 bits (544), Expect = 3e-53
 Identities = 97/141 (68%), Positives = 122/141 (86%), Gaps = 2/141 (1%)
 Frame = +1

Query: 202 SVTKLSSPPH--EDNSPEYRQWKDREAEILQDIEPIVSLAKQILHTDRYADGDWLSTEDE 375
           SV  +S PP     + P+YR+WK++E EIL DIEPI+ L K+ILH+ RYADG+ L+ EDE
Sbjct: 56  SVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDE 115

Query: 376 KVVVEKLLAYHPHSQDKLGSGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKCLRAY 555
           + VV++LLA+HPH++DK+G GL+SIMVDRHPQF++SRC FV+RTDGGWIDFSYQKCLRAY
Sbjct: 116 RTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAY 175

Query: 556 IRDKYPAYAERFIREHFKRGS 618
           IR+KYP++AERFIREHFKRGS
Sbjct: 176 IRNKYPSFAERFIREHFKRGS 196