BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004401
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding pro...   377   e-102
gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]   368   e-100
ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [S...   337   2e-90
gb|ABK24177.1| unknown [Picea sitchensis]                             335   9e-90
ref|XP_003559236.1| PREDICTED: DNA-binding protein HEXBP-like [B...   333   2e-89

>ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
           gi|296086261|emb|CBI31702.3| unnamed protein product
           [Vitis vinifera]
          Length = 238

 Score =  377 bits (968), Expect = e-102
 Identities = 158/195 (81%), Positives = 174/195 (89%)
 Frame = -3

Query: 664 QDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQCKNEP 485
           QDYLC  CKRPGHFARDCPNV VCNNCGLPGHIAAECN+ TMCWNCKESGH+ASQC N+P
Sbjct: 37  QDYLCNKCKRPGHFARDCPNVTVCNNCGLPGHIAAECNSTTMCWNCKESGHLASQCPNDP 96

Query: 484 ICHVCGKVGHLARDCSGSGLSLHDSRLCNNCYKPGHIAVDCTNEKACNNCRKTGHLAREC 305
           +CH+CGK+GHLARDCS  GL  HD+RLCNNCYKPGHIA DCTNEKACNNC KTGHLAR+C
Sbjct: 97  VCHMCGKMGHLARDCSSPGLPAHDARLCNNCYKPGHIAADCTNEKACNNCHKTGHLARDC 156

Query: 304 PNEPVCNLCNVAGHMARQCPKSSLASEIVGGPFRDILCRSCGQPGHISRDCVGIVICHNC 125
            NEPVCN+CN++GH+ARQCPKS L  E  GGPFRDI C +CGQPGHISRDCV IVIC+NC
Sbjct: 157 LNEPVCNICNISGHVARQCPKSRLVPE-TGGPFRDITCHNCGQPGHISRDCVSIVICNNC 215

Query: 124 GGRGHQAYECPSGRM 80
           GGRGHQ++ECPS RM
Sbjct: 216 GGRGHQSFECPSVRM 230


>gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]
          Length = 244

 Score =  368 bits (945), Expect = e-100
 Identities = 153/195 (78%), Positives = 173/195 (88%)
 Frame = -3

Query: 664 QDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQCKNEP 485
           QD +CKNCKRPGHFARDC ++AVCNNCGLPGHIAAEC AKT+CWNCKE GH+A++C NE 
Sbjct: 41  QDVICKNCKRPGHFARDCSHIAVCNNCGLPGHIAAECTAKTLCWNCKEPGHMANECSNEA 100

Query: 484 ICHVCGKVGHLARDCSGSGLSLHDSRLCNNCYKPGHIAVDCTNEKACNNCRKTGHLAREC 305
           +CH C K GHLARDCS SGLS  D+RLCNNC++PGHIA DCTN+K CNNCRK GHLAREC
Sbjct: 101 VCHNCNKTGHLARDCSASGLSSFDTRLCNNCHRPGHIAADCTNDKTCNNCRKPGHLAREC 160

Query: 304 PNEPVCNLCNVAGHMARQCPKSSLASEIVGGPFRDILCRSCGQPGHISRDCVGIVICHNC 125
            N+PVCN+CNV+GH+ARQCPKS+L SEI GGPFRDI+CR C QPGHISRDCVGIVIC+ C
Sbjct: 161 TNDPVCNVCNVSGHVARQCPKSNLPSEIHGGPFRDIICRVCNQPGHISRDCVGIVICNTC 220

Query: 124 GGRGHQAYECPSGRM 80
           GGRGH AYECPSGR+
Sbjct: 221 GGRGHMAYECPSGRL 235


>ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
           gi|241917482|gb|EER90626.1| hypothetical protein
           SORBIDRAFT_01g003240 [Sorghum bicolor]
          Length = 258

 Score =  337 bits (863), Expect = 2e-90
 Identities = 136/195 (69%), Positives = 165/195 (84%)
 Frame = -3

Query: 664 QDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQCKNEP 485
           +D +CKNC+RPGHFA++CP+   CNNC LPGH AAEC ++T+CWNCKESGH+AS+CKNE 
Sbjct: 59  RDLVCKNCRRPGHFAKECPSAPTCNNCNLPGHFAAECTSQTICWNCKESGHIASECKNEA 118

Query: 484 ICHVCGKVGHLARDCSGSGLSLHDSRLCNNCYKPGHIAVDCTNEKACNNCRKTGHLAREC 305
           +CH C K GHLARDC  SG ++   +LCN C+KPGH AVDCTNE+ACNNCR+ GH+AREC
Sbjct: 119 LCHTCNKTGHLARDCPTSGANV---KLCNKCFKPGHFAVDCTNERACNNCRQPGHIAREC 175

Query: 304 PNEPVCNLCNVAGHMARQCPKSSLASEIVGGPFRDILCRSCGQPGHISRDCVGIVICHNC 125
            N+PVCNLCNV+GH+AR CPK++LASEI GGPFRDILCR CGQPGHISR+C+  +IC  C
Sbjct: 176 KNDPVCNLCNVSGHVARVCPKTTLASEIQGGPFRDILCRICGQPGHISRNCIATIICDTC 235

Query: 124 GGRGHQAYECPSGRM 80
           GGRGH +YECPS R+
Sbjct: 236 GGRGHMSYECPSARI 250


>gb|ABK24177.1| unknown [Picea sitchensis]
          Length = 248

 Score =  335 bits (858), Expect = 9e-90
 Identities = 140/202 (69%), Positives = 161/202 (79%), Gaps = 8/202 (3%)
 Frame = -3

Query: 661 DYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQCKNEPI 482
           D  CKNCKRPGHFARDCPNV+VCNNCGLPGHIA EC  K++CWNC+E GHVASQC N+PI
Sbjct: 39  DDACKNCKRPGHFARDCPNVSVCNNCGLPGHIAVECTTKSLCWNCREPGHVASQCSNDPI 98

Query: 481 CHVCGKVGHLARDCSGSGLSLHDSRLCNNCYKPGHIAVDCTNEKACNNCRKTGHLARECP 302
           CH CGK GHL+RDC+   L   D RLCNNCYK GHIA +CTNEKACNNCRKTGHLAR+C 
Sbjct: 99  CHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCT 158

Query: 301 NEPVCNLCNVAGHMARQCPKSSLASEIVG--------GPFRDILCRSCGQPGHISRDCVG 146
           N PVCNLCN++GH+AR+CPK  +  +  G        G F DI+CR+C +PGH SR+C  
Sbjct: 159 NSPVCNLCNISGHVARECPKGRILDDNRGGRFMDERRGRFNDIICRTCNEPGHTSRECTP 218

Query: 145 IVICHNCGGRGHQAYECPSGRM 80
           I+ICHNCGGRGH AYECPSGR+
Sbjct: 219 ILICHNCGGRGHVAYECPSGRV 240



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 13/101 (12%)
 Frame = -3

Query: 358 NEKACNNCRKTGHLARECPNEPVCNLCNVAGHMARQCPKSSLA------SEIVGGPFRDI 197
           ++ AC NC++ GH AR+CPN  VCN C + GH+A +C   SL         +      D 
Sbjct: 38  SDDACKNCKRPGHFARDCPNVSVCNNCGLPGHIAVECTTKSLCWNCREPGHVASQCSNDP 97

Query: 196 LCRSCGQPGHISRDCVG-------IVICHNCGGRGHQAYEC 95
           +C +CG+ GH+SRDC         I +C+NC  +GH A EC
Sbjct: 98  ICHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAEC 138



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 37/103 (35%), Positives = 47/103 (45%), Gaps = 21/103 (20%)
 Frame = -3

Query: 652 CKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNA---------------------KTMC 536
           C NC++ GH ARDC N  VCN C + GH+A EC                         +C
Sbjct: 144 CNNCRKTGHLARDCTNSPVCNLCNISGHVARECPKGRILDDNRGGRFMDERRGRFNDIIC 203

Query: 535 WNCKESGHVASQCKNEPICHVCGKVGHLARDCSGSGLSLHDSR 407
             C E GH + +C    ICH CG  GH+A +C    + L D R
Sbjct: 204 RTCNEPGHTSRECTPILICHNCGGRGHVAYECPSGRVMLRDMR 246


>ref|XP_003559236.1| PREDICTED: DNA-binding protein HEXBP-like [Brachypodium distachyon]
          Length = 301

 Score =  333 bits (855), Expect = 2e-89
 Identities = 136/195 (69%), Positives = 165/195 (84%)
 Frame = -3

Query: 664 QDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQCKNEP 485
           +D  CKNC+R GHFARDCP+ + CNNC LPGH AAEC +KT+CWNCK+SGH+A++C NE 
Sbjct: 103 RDLSCKNCRRSGHFARDCPSASTCNNCNLPGHFAAECTSKTVCWNCKKSGHIATECTNEA 162

Query: 484 ICHVCGKVGHLARDCSGSGLSLHDSRLCNNCYKPGHIAVDCTNEKACNNCRKTGHLAREC 305
           +CH C K GHLARDC  SG     ++LCNNC++PGHIAVDCTN++ACNNCR++GH+AREC
Sbjct: 163 LCHTCSKSGHLARDCPTSG----SAKLCNNCFQPGHIAVDCTNDRACNNCRQSGHIAREC 218

Query: 304 PNEPVCNLCNVAGHMARQCPKSSLASEIVGGPFRDILCRSCGQPGHISRDCVGIVICHNC 125
            N+PVCNLCNV+GH+AR CPK++LASEI GGPFRDILCR CGQPGHISR+C+  VIC  C
Sbjct: 219 TNDPVCNLCNVSGHLARACPKTTLASEIHGGPFRDILCRMCGQPGHISRNCMATVICDTC 278

Query: 124 GGRGHQAYECPSGRM 80
           GGRGH +YECPS R+
Sbjct: 279 GGRGHMSYECPSARV 293