BLASTX nr result

ID: Coptis24_contig00004394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004394
         (1208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325036.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-34
ref|XP_002329644.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-27
ref|XP_003633215.1| PREDICTED: uncharacterized protein LOC100852...    97   1e-17
ref|XP_004161799.1| PREDICTED: uncharacterized protein LOC101225...    89   2e-15
ref|XP_004146328.1| PREDICTED: uncharacterized protein LOC101222...    89   2e-15

>ref|XP_002325036.1| predicted protein [Populus trichocarpa] gi|222866470|gb|EEF03601.1|
            predicted protein [Populus trichocarpa]
          Length = 281

 Score =  117 bits (294), Expect(2) = 2e-34
 Identities = 75/173 (43%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
 Frame = +1

Query: 520  GYNFNTMISMRADPHLQEQSSSCSRDTSKMPRGFDLERLAEADISNDISAI-EDKAEPNS 696
            GY+F+   S+R DP+ +E+S SCS +T KM RGFDLER AE DIS  +SA+ E++A P++
Sbjct: 134  GYSFHIQ-SLREDPNSRERSGSCSGETVKMSRGFDLERPAEEDISTGVSAVDENQAGPSA 192

Query: 697  LKSSKDKMNITSSCDPCFYNDGENEVELTLSIGFGTNKKNSKNCKAHSSPESGCSKPNNY 876
              + K KM+I  S       D ++EVELTLSIG  T+KK SK                NY
Sbjct: 193  YATQKRKMSIDGS-------DEDSEVELTLSIGGSTSKKISK----------------NY 229

Query: 877  ERRELDRSLSIRSDAGDQYSERTNSTGSAGAAFDREGLQQPPWLFQALSLNRT 1035
            +  ELD S S +S+  +  S  T    S+ A FD++  ++P WLFQ+LS+NR+
Sbjct: 230  QTLELDSSASFKSERREDRSTPTTPLSSSRATFDQD-RKRPQWLFQSLSINRS 281



 Score = 55.5 bits (132), Expect(2) = 2e-34
 Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
 Frame = +3

Query: 3   MGTAVQHAVDPVAILPLAYNVFGVNNSDSWDFVK---IKKTLT-------DNSMDRRIEK 152
           MGT +++A+  +A    + ++  V+  D  ++++   ++K L         +SMD+   K
Sbjct: 1   MGTKLEYAITLLATSQNSSSI-SVHCMDDLEYLQTRGLEKNLQVSGIDKFGSSMDKMPGK 59

Query: 153 FTQESVRMTMLKHEEIFKEQVLELHRIYKVQKLLMAEFRNNEPQLHSPTILSSQTGRIGG 332
              + ++ TM  HE+IFK+QV ELHR+Y VQKLLM E +    Q                
Sbjct: 60  HNIDFIKKTMQLHEDIFKQQVRELHRLYSVQKLLMEELKKGIKQ---------------- 103

Query: 333 KCIVTDNQTGFWTTATISETNHSPFSSWNHSLSNQT 440
                     +WT  T S+ N S F +  +S +  T
Sbjct: 104 -------NRKYWTPITSSDINCSQFVNRPNSAAQTT 132


>ref|XP_002329644.1| predicted protein [Populus trichocarpa] gi|222870525|gb|EEF07656.1|
            predicted protein [Populus trichocarpa]
          Length = 277

 Score = 86.3 bits (212), Expect(2) = 2e-27
 Identities = 63/157 (40%), Positives = 86/157 (54%), Gaps = 2/157 (1%)
 Frame = +1

Query: 550  RADPHLQEQSSSCSRDTSKMPRGFDLERLAEADISNDISAI-EDKAEPNSLKSSKDKMNI 726
            R DP  +E+S SCS +T ++ RGFDLERLAE  IS  + A+ E++A P++    K KM+I
Sbjct: 144  RDDPSSRERSGSCSDETMRLTRGFDLERLAE-HISTGVGAVDENQAGPSTCAPQKGKMSI 202

Query: 727  TSSCDPCFYNDGENEVELTLSIGFG-TNKKNSKNCKAHSSPESGCSKPNNYERRELDRSL 903
              S       D ++EVELTLSIG   T+KK SK                NY+  ELD   
Sbjct: 203  DGS-------DEDSEVELTLSIGGSTTSKKISK----------------NYQTLELDSPA 239

Query: 904  SIRSDAGDQYSERTNSTGSAGAAFDREGLQQPPWLFQ 1014
            S  S+ G+ YS  T    S+ A   ++  ++P WLFQ
Sbjct: 240  SFISERGEDYSIPTTPMSSSSATCGQD-RKRPHWLFQ 275



 Score = 63.9 bits (154), Expect(2) = 2e-27
 Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
 Frame = +3

Query: 3   MGTAVQHAVDPVAILPLAYNVFGVNNSDSWDFVKIKKTLTD----------NSMDRRIEK 152
           MGT +++A++ +A    + +V  V   D  ++++ +    D          +SMDR  EK
Sbjct: 1   MGTKLEYAINLLATSHNSSSV-SVRCVDDLEYLQTRGLSKDLQVSGIDNFCSSMDRMPEK 59

Query: 153 FTQESVRMTMLKHEEIFKEQVLELHRIYKVQKLLMAEFRNNEPQLHSPTILSSQTGRIGG 332
              + ++ TM  H++IFK+QV ELHR+Y VQK+LM E   NE                  
Sbjct: 60  HNIDFIKKTMQLHDDIFKQQVRELHRLYSVQKMLMDELNKNE------------------ 101

Query: 333 KCIVTDNQTGFWTTATISETNHSPFSSWNHSLSNQT 440
             I  D +  +WT  T S TN+S F++   S    T
Sbjct: 102 --IKQDRK--YWTPMTSSYTNYSQFANRPKSTEQTT 133


>ref|XP_003633215.1| PREDICTED: uncharacterized protein LOC100852427 [Vitis vinifera]
          Length = 277

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
 Frame = +1

Query: 556  DPHLQEQSSSCSRDTSKMPRGFDLERLAEADISNDISAIEDKAEPNSLKSSKDKMNITSS 735
            DP  +E SSSCS DT +M RG DL+R  +  +S   +AI++  +        +KM++   
Sbjct: 130  DPSSRELSSSCSGDTLRMARGLDLKRANQEGVSTAFNAIDEAHQ----HPEDNKMSLVE- 184

Query: 736  CDPCFYNDGENEVELTLSIGFGTN-KKNSKNCKAHSSPESGCSKPNNYERRELDRSLSIR 912
                     E+EVELTLSIG  T+ KK  +N + + S E  CS+  N E  +L  S S +
Sbjct: 185  ---------ESEVELTLSIGTPTSRKKKPENHQPNRSLELACSELTNNEIPDLGSSSSFK 235

Query: 913  SDAGDQYSERTNSTGSAGAAFDREGLQQPPWLFQALSLNRT 1035
            SD GD+ S+  N+  S+ A  + +  +QP WLFQ LSLNRT
Sbjct: 236  SDRGDECSDLANAASSSSATTE-DYRKQPLWLFQGLSLNRT 275



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
 Frame = +3

Query: 3   MGTAVQHAVDPVAILPLAYNVFGVNNSDSWDFVKIKKTLTD----------NSMDRRIEK 152
           MGT  Q+ ++ +A  P +  +      D WD+ K K+   D          NSMDR +E+
Sbjct: 1   MGTKFQYMINVLATSPNSSRLTE-KPMDDWDYFKNKELKVDFKRNCIDKLHNSMDRILEQ 59

Query: 153 FTQESVRMTMLKHEEIFKEQVLELHRIYKVQKLLMAEFRNNEPQ 284
              E+++ TML HE++FK QV ELHR+Y VQK+LM E +  + Q
Sbjct: 60  NNVETIKKTMLMHEDVFKHQVQELHRLYSVQKMLMKELKGEKKQ 103


>ref|XP_004161799.1| PREDICTED: uncharacterized protein LOC101225000 [Cucumis sativus]
          Length = 313

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
 Frame = +1

Query: 520  GYNFNTMISMRADPHLQEQSSSCSRDTSKM-PRGFDLER-LAEADISNDISAIEDKAEPN 693
            G  FN       DP  +E+S SCS D  ++  RGFDLER  AE D+S  +S +++     
Sbjct: 159  GLIFNLQSLRSDDPSSRERSGSCSGDNMRIISRGFDLERPAAEEDMSTGVSTVDEDQAGP 218

Query: 694  SLKSSKDKMNITSSCDPCFYNDGENEVELTLSIGFGTNKKNSKNCKAHSSPESGCSKPNN 873
            S      KM+I    D C   D E++VELTLSIG   +KK SK+             P  
Sbjct: 219  STPIVVGKMSI----DGC--EDEESDVELTLSIGGSLSKKRSKSFP-----------PLT 261

Query: 874  YERRELDRSLSIRSDAGDQY-SERTNSTGSAGAAFDREGLQQPPWLFQALSL 1026
             ++RE+D SLS +S+ GDQ  S+ T    S+ A  D+E  ++P WLFQ+L L
Sbjct: 262  QKKREIDSSLSFKSERGDQECSDPTTPMSSSSATCDQE-TKRPHWLFQSLKL 312


>ref|XP_004146328.1| PREDICTED: uncharacterized protein LOC101222016 [Cucumis sativus]
          Length = 308

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
 Frame = +1

Query: 520  GYNFNTMISMRADPHLQEQSSSCSRDTSKM-PRGFDLER-LAEADISNDISAIEDKAEPN 693
            G  FN       DP  +E+S SCS D  ++  RGFDLER  AE D+S  +S +++     
Sbjct: 154  GLIFNLQSLRSDDPSSRERSGSCSGDNMRIISRGFDLERPAAEEDMSTGVSTVDEDQAGP 213

Query: 694  SLKSSKDKMNITSSCDPCFYNDGENEVELTLSIGFGTNKKNSKNCKAHSSPESGCSKPNN 873
            S      KM+I    D C   D E++VELTLSIG   +KK SK+             P  
Sbjct: 214  STPIVVGKMSI----DGC--EDEESDVELTLSIGGSLSKKRSKSFP-----------PLT 256

Query: 874  YERRELDRSLSIRSDAGDQY-SERTNSTGSAGAAFDREGLQQPPWLFQALSL 1026
             ++RE+D SLS +S+ GDQ  S+ T    S+ A  D+E  ++P WLFQ+L L
Sbjct: 257  QKKREIDSSLSFKSERGDQECSDPTTPMSSSSATCDQE-TKRPHWLFQSLKL 307


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