BLASTX nr result

ID: Coptis24_contig00004393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004393
         (1745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267825.1| PREDICTED: fasciclin-like arabinogalactan pr...   476   e-132
gb|ABV27490.1| fasciclin-like arabinogalactan protein 19 [Gossyp...   457   e-126
gb|ACL36352.1| fascilin-like arabinogalactan protein [Gossypium ...   454   e-125
ref|XP_004148925.1| PREDICTED: fasciclin-like arabinogalactan pr...   449   e-124
ref|XP_002522745.1| conserved hypothetical protein [Ricinus comm...   447   e-123

>ref|XP_002267825.1| PREDICTED: fasciclin-like arabinogalactan protein 1-like [Vitis
            vinifera]
          Length = 405

 Score =  476 bits (1225), Expect = e-132
 Identities = 248/380 (65%), Positives = 289/380 (76%), Gaps = 3/380 (0%)
 Frame = +1

Query: 406  TSAHNVTKILAKHPEFSTFNHYLTITHLADEINRRETITVCAVDNAGMSDLLSKHLSVFA 585
            T AHN+T ILAK+PEFSTFNHYLT+THLA+EIN RETITVCAVDN GMSDLL+K LS++A
Sbjct: 26   TEAHNITSILAKNPEFSTFNHYLTVTHLANEINLRETITVCAVDNPGMSDLLAKGLSIYA 85

Query: 586  IKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGAAPGSTGFVNVTDLKGGKVGFGA 765
            IKNVLSLHILLDYFGAKKLHQITNGTALAATM+QATG+APGS+GFVN+TDLKGGKVGFGA
Sbjct: 86   IKNVLSLHILLDYFGAKKLHQITNGTALAATMYQATGSAPGSSGFVNITDLKGGKVGFGA 145

Query: 766  EDNGGTLDASYVKSVQEIPYNISVIQISKILXXXXXXXXXXXXXQLNLTALMTKKGCKVF 945
              N G L A++VKSV+EIPYNISVIQISKIL             + NLTALM+  GCKVF
Sbjct: 146  GGNDGDLTATFVKSVEEIPYNISVIQISKILPSEEAEAPTPGPSEQNLTALMSAHGCKVF 205

Query: 946  ADLLIATGALTTFEDNADGGLTVFCPLDSVINGFIPKYKNLTTEGKVSLLLYHGVPVYSS 1125
            AD L+A+ A  T+EDN +GGLTVFCP+D V   F+PKYKNLT +GK+SLLLYHG+PVY S
Sbjct: 206  ADTLVASDAQKTYEDNLEGGLTVFCPMDDVFKSFLPKYKNLTADGKLSLLLYHGIPVYQS 265

Query: 1126 MAMLKSNNGLMNTLATDGVNKYDFTVQNDGAVVTLKTKLVTARLTGTLLDEQPLAIYTIN 1305
            +++LKS+NG+MNTLATDG  KYDFTVQNDG VVTLKTK+VTAR+TGTLLDEQPL I+TI+
Sbjct: 266  LSLLKSSNGVMNTLATDGAKKYDFTVQNDGEVVTLKTKIVTARITGTLLDEQPLGIFTID 325

Query: 1306 KVLM--XXXXXXXXXXXXXXXXXXXXXXXXXXSTPSAAEPI-APDGEPADQTADQNDASG 1476
            KVL+                            S P+   P  AP+ +PADQTAD N +  
Sbjct: 326  KVLLPKELFKAEAPAPAPAPAPEADAPTTKKSSPPAPVSPAEAPNEDPADQTADDNGS-- 383

Query: 1477 LRSKVGAGLLVATLVSVWLG 1536
               +   G  VA L+S  LG
Sbjct: 384  --VRYNGGRFVALLLSSSLG 401


>gb|ABV27490.1| fasciclin-like arabinogalactan protein 19 [Gossypium hirsutum]
          Length = 398

 Score =  457 bits (1175), Expect = e-126
 Identities = 234/381 (61%), Positives = 283/381 (74%), Gaps = 1/381 (0%)
 Frame = +1

Query: 406  TSAHNVTKILAKHPEFSTFNHYLTITHLADEINRRETITVCAVDNAGMSDLLSKHLSVFA 585
            ++AHN+T+ILAKHPEFSTFNHYLT+THLA EINRRETITV A++NA MS LLSK LS++ 
Sbjct: 19   SNAHNITRILAKHPEFSTFNHYLTLTHLASEINRRETITVLALNNAAMSSLLSKQLSLYT 78

Query: 586  IKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGAAPGSTGFVNVTDLKGGKVGFGA 765
            +KNVLSLH+L+DYFG+KKLHQITNGTAL +TMFQA+GAAPGS+G++N+TDLKGGKVGFGA
Sbjct: 79   LKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGSSGYINITDLKGGKVGFGA 138

Query: 766  EDNGGTLDASYVKSVQEIPYNISVIQISKILXXXXXXXXXXXXXQLNLTALMTKKGCKVF 945
            E+N G LDA YVKSV EIPYNISV+QIS++L             +LNLT +M+K+GCK F
Sbjct: 139  ENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAEPSKLNLTEIMSKQGCKSF 198

Query: 946  ADLLIATGALTTFEDNADGGLTVFCPLDSVINGFIPKYKNLTTEGKVSLLLYHGVPVYSS 1125
            ADLLI++GA  TF +N DGGLTVFCP D VI  F+PKYKNLT   K SLLLYHGVPVY S
Sbjct: 199  ADLLISSGADATFNENIDGGLTVFCPTDPVIKDFMPKYKNLTASKKASLLLYHGVPVYQS 258

Query: 1126 MAMLKSNNGLMNTLATDGVNKYDFTVQNDGAVVTLKTKLVTARLTGTLLDEQPLAIYTIN 1305
            M MLKSNNG+MNTLATDG NKYDFT+QNDG VVTL+TK++TA++TGTL DE+PL +Y IN
Sbjct: 259  MQMLKSNNGIMNTLATDGANKYDFTIQNDGEVVTLETKVMTAKITGTLKDEEPLIVYKIN 318

Query: 1306 KVLMXXXXXXXXXXXXXXXXXXXXXXXXXXSTPSAAEPIAP-DGEPADQTADQNDASGLR 1482
            KVL+                              A E  AP + +PAD     ND SG+ 
Sbjct: 319  KVLLPRELYKPVEAPAESPKPSKSKSKSKHKVADAPESDAPAESDPADDQTADND-SGVA 377

Query: 1483 SKVGAGLLVATLVSVWLGTFM 1545
               G   LV  ++S+ +G  +
Sbjct: 378  GLDGR-RLVMVMLSLCIGVLL 397


>gb|ACL36352.1| fascilin-like arabinogalactan protein [Gossypium hirsutum]
          Length = 397

 Score =  454 bits (1169), Expect = e-125
 Identities = 233/381 (61%), Positives = 283/381 (74%), Gaps = 1/381 (0%)
 Frame = +1

Query: 406  TSAHNVTKILAKHPEFSTFNHYLTITHLADEINRRETITVCAVDNAGMSDLLSKHLSVFA 585
            ++AHN+T+ILAK+PEFSTFNHYLT+THLA EINRRETITV A++NA MS LLSK LS++ 
Sbjct: 18   SNAHNITRILAKNPEFSTFNHYLTLTHLASEINRRETITVLALNNAAMSSLLSKQLSLYT 77

Query: 586  IKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGAAPGSTGFVNVTDLKGGKVGFGA 765
            +KNVLSLH+L+DYFG+KKLHQITNGTAL +TMFQA+GAAPGS+G++N+TDLKGGKVGFGA
Sbjct: 78   LKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGSSGYINITDLKGGKVGFGA 137

Query: 766  EDNGGTLDASYVKSVQEIPYNISVIQISKILXXXXXXXXXXXXXQLNLTALMTKKGCKVF 945
            E+N G LDA YVKSV EIPYNISV+QIS++L             +LNLT +M+K+GCK F
Sbjct: 138  ENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAEPSKLNLTEIMSKQGCKAF 197

Query: 946  ADLLIATGALTTFEDNADGGLTVFCPLDSVINGFIPKYKNLTTEGKVSLLLYHGVPVYSS 1125
            ADLLI++GA  TF +N DGGLTVFCP D VI  F+PKYKNLT   K SLLLYHGVPVY S
Sbjct: 198  ADLLISSGADATFNENIDGGLTVFCPTDPVIKDFMPKYKNLTASKKASLLLYHGVPVYQS 257

Query: 1126 MAMLKSNNGLMNTLATDGVNKYDFTVQNDGAVVTLKTKLVTARLTGTLLDEQPLAIYTIN 1305
            M MLKSNNG+MNTLATDG NKYDFT+QNDG VVTL+TK++TA++TGTL DE+PL +Y IN
Sbjct: 258  MQMLKSNNGIMNTLATDGANKYDFTIQNDGEVVTLETKVMTAKITGTLKDEEPLIVYKIN 317

Query: 1306 KVLMXXXXXXXXXXXXXXXXXXXXXXXXXXSTPSAAEPIAP-DGEPADQTADQNDASGLR 1482
            KVL+                              A E  AP + +PAD     ND SG+ 
Sbjct: 318  KVLLPRELYKPVEAPAESPKPSKSKSKSKHKVADAPESDAPAESDPADDQTADND-SGVA 376

Query: 1483 SKVGAGLLVATLVSVWLGTFM 1545
               G   LV  ++S+ +G  +
Sbjct: 377  GLDGR-RLVMMMLSLCIGVLL 396


>ref|XP_004148925.1| PREDICTED: fasciclin-like arabinogalactan protein 1-like [Cucumis
            sativus] gi|449527723|ref|XP_004170859.1| PREDICTED:
            fasciclin-like arabinogalactan protein 1-like [Cucumis
            sativus]
          Length = 415

 Score =  449 bits (1156), Expect = e-124
 Identities = 231/371 (62%), Positives = 274/371 (73%), Gaps = 14/371 (3%)
 Frame = +1

Query: 400  ADTSAHNVTKILAKHPEFSTFNHYLTITHLADEINRRETITVCAVDNAGMSDLLSKHLSV 579
            A  +AHN+TK+L KHPEFSTFNHYLT THLA EINRR TITVC VDN+ MSDLL+K LS+
Sbjct: 24   ATATAHNITKLLEKHPEFSTFNHYLTTTHLAPEINRRTTITVCVVDNSAMSDLLAKQLSI 83

Query: 580  FAIKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGAAPGSTGFVNVTDLKGGKVGF 759
            ++IKN LSLH+LLDYFGAKKLHQITNGTALAATMFQATG+APGS+GFVN+TDLKGGKVGF
Sbjct: 84   YSIKNTLSLHVLLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITDLKGGKVGF 143

Query: 760  GAEDNGGTLDASYVKSVQEIPYNISVIQISKILXXXXXXXXXXXXXQLNLTALMTKKGCK 939
            G +D+   +DA YVKSV+E+PYNIS+IQISKIL             ++NLT +M+  GCK
Sbjct: 144  GLQDSDD-IDAMYVKSVEEVPYNISIIQISKILPSQVAEAPTPSPSEMNLTGIMSAHGCK 202

Query: 940  VFADLLIATGALTTFEDNADGGLTVFCPLDSVINGFIPKYKNLTTEGKVSLLLYHGVPVY 1119
            VFA+ L A+ A+ TF++NA GGLTVFCPLD V   F+PKYKNLT  GK+SLL YHG+PVY
Sbjct: 203  VFAETLQASDAVKTFQENAIGGLTVFCPLDDVFKAFLPKYKNLTAAGKISLLEYHGLPVY 262

Query: 1120 SSMAMLKSNNGLMNTLATDGVNKYDFTVQNDGAVVTLKTKLVTARLTGTLLDEQPLAIYT 1299
            +SM+MLKSNNG+ NTLATDG NKYDF +QNDG VVTL+TK+VTA++TGTLLDEQP+AIYT
Sbjct: 263  NSMSMLKSNNGITNTLATDGANKYDFVIQNDGEVVTLQTKVVTAKITGTLLDEQPVAIYT 322

Query: 1300 INKVLM------------XXXXXXXXXXXXXXXXXXXXXXXXXXSTPSAAEPI--APDGE 1437
            I+KVL                                       +TP+A  P     D +
Sbjct: 323  IDKVLKPRELFKKEIPAPAPAPAPETEKPADAPKAHSHKHKKGAATPAADSPADSPSDED 382

Query: 1438 PADQTADQNDA 1470
            PADQT D N A
Sbjct: 383  PADQTTDGNGA 393


>ref|XP_002522745.1| conserved hypothetical protein [Ricinus communis]
            gi|223537983|gb|EEF39596.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 408

 Score =  447 bits (1149), Expect = e-123
 Identities = 234/388 (60%), Positives = 280/388 (72%), Gaps = 8/388 (2%)
 Frame = +1

Query: 406  TSAHNVTKILAKHPEFSTFNHYLTITHLADEINRRETITVCAVDNAGMSDLLSKHLSVFA 585
            T+AHN+T++L+ HP FSTFNHYLTITHLADEINRR TITVCA+DN  MS LLSKH S++ 
Sbjct: 24   TNAHNITRLLSHHPSFSTFNHYLTITHLADEINRRTTITVCAIDNTAMSALLSKHPSIYT 83

Query: 586  IKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGAAPGSTGFVNVTDLKGGKVGFGA 765
            IKN+LSLH+LLDYFGAKKLHQITNGTALAATMFQATG+APGS+GFVN+TD+KGGKV FG 
Sbjct: 84   IKNMLSLHVLLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITDIKGGKVAFGP 143

Query: 766  EDNGGTLDASYVKSVQEIPYNISVIQISKILXXXXXXXXXXXXXQLNLTALMTKKGCKVF 945
            EDN G L   +VKS++E+PYNIS+IQIS  L             ++NLT +M+  GCK F
Sbjct: 144  EDNDGNLGVFFVKSLEEVPYNISIIQISNFLPSDVAAAPTPEPSRMNLTDMMSAHGCKFF 203

Query: 946  ADLLIAT-GALTTFEDNADGGLTVFCPLDSVINGFIPKYKNLTTEGKVSLLLYHGVPVYS 1122
            AD L+A   A +T++DN DGGLTVFCPLD     F+PKYKNLT  GKVS L + GVP+Y 
Sbjct: 204  ADTLLANPEASSTYQDNIDGGLTVFCPLDDPFKAFLPKYKNLTAAGKVSFLEFFGVPIYQ 263

Query: 1123 SMAMLKSNNGLMNTLATDGVNKYDFTVQNDGAVVTLKTKLVTARLTGTLLDEQPLAIYTI 1302
            S++MLKSNNG+MNTLATDG NK+DFTVQNDG  VTLKTK  TA++ GTL+DEQPLAIYTI
Sbjct: 264  SLSMLKSNNGVMNTLATDGANKFDFTVQNDGEDVTLKTKTATAKIIGTLIDEQPLAIYTI 323

Query: 1303 NKVLMXXXXXXXXXXXXXXXXXXXXXXXXXXST------PSAAEPIAP-DGEPADQTADQ 1461
            NKVL+                          S+      PS +   AP D +PADQTAD 
Sbjct: 324  NKVLLPKELFKAEAPTPAPAPAPEKAADGPKSSKDDTSAPSDSPADAPSDDDPADQTAD- 382

Query: 1462 NDASGLRSKVGAGLLVATLVSVWLGTFM 1545
             D++G+R     G  VA ++SV LG  M
Sbjct: 383  -DSAGVR--FNGGRFVAKVLSVCLGLLM 407


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