BLASTX nr result

ID: Coptis24_contig00004384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004384
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282021.1| PREDICTED: uncharacterized protein DDB_G0288...   503   e-140
ref|XP_002510411.1| Protein yrdA, putative [Ricinus communis] gi...   500   e-139
ref|XP_002302024.1| predicted protein [Populus trichocarpa] gi|1...   500   e-139
ref|XP_002282034.1| PREDICTED: uncharacterized protein DDB_G0288...   496   e-138
ref|XP_004152688.1| PREDICTED: gamma carbonic anhydrase 1, mitoc...   496   e-138

>ref|XP_002282021.1| PREDICTED: uncharacterized protein DDB_G0288155 isoform 1 [Vitis
            vinifera] gi|147856360|emb|CAN79636.1| hypothetical
            protein VITISV_014473 [Vitis vinifera]
            gi|302142516|emb|CBI19719.3| unnamed protein product
            [Vitis vinifera]
          Length = 272

 Score =  503 bits (1296), Expect = e-140
 Identities = 250/271 (92%), Positives = 257/271 (94%)
 Frame = -3

Query: 1304 MGTLGKAIYTVGFWIRETGQAIDRLGSRLQGNYYFQEQISRHRTLMNIFDKVPVVDKDAF 1125
            MGTLGKAIYTVGFWIRETGQAIDRLG RLQGNYYF EQISRHRTLMN+FDK P+VDKDAF
Sbjct: 1    MGTLGKAIYTVGFWIRETGQAIDRLGCRLQGNYYFLEQISRHRTLMNLFDKAPIVDKDAF 60

Query: 1124 VAPSASIIGDVQVGRSSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT 945
            VAPSASIIGDVQVGR SSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT
Sbjct: 61   VAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT 120

Query: 944  IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKHGMVAAGALVRQNTRIPSGEV 765
            IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDG +VEKH MVAAGALVRQNTRIP GEV
Sbjct: 121  IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGSIVEKHAMVAAGALVRQNTRIPCGEV 180

Query: 764  WGGNPAKLLRKLTEEEITFIAQSATNYSNLAQVHGAENAKPFEEIEFEKGLRKKFARRDE 585
            WGGNPAK LRKLT+EEI FI+QSA NYSNLAQVH AENAKPF+EIEFEK LRKKFARRDE
Sbjct: 181  WGGNPAKFLRKLTDEEIAFISQSAINYSNLAQVHAAENAKPFDEIEFEKVLRKKFARRDE 240

Query: 584  DYDSMLGVVRETPPELILPDNILPDKSAKAS 492
            DYDSMLGVVRETPPELILPDNILPDK+ K S
Sbjct: 241  DYDSMLGVVRETPPELILPDNILPDKAPKVS 271


>ref|XP_002510411.1| Protein yrdA, putative [Ricinus communis] gi|223551112|gb|EEF52598.1|
            Protein yrdA, putative [Ricinus communis]
          Length = 271

 Score =  500 bits (1288), Expect = e-139
 Identities = 244/270 (90%), Positives = 260/270 (96%)
 Frame = -3

Query: 1304 MGTLGKAIYTVGFWIRETGQAIDRLGSRLQGNYYFQEQISRHRTLMNIFDKVPVVDKDAF 1125
            MGTLG+AIYTVGFWIRETGQA+DRLG R QG+YYFQEQ+SRHRTLMNIFDK P+VDKDAF
Sbjct: 1    MGTLGRAIYTVGFWIRETGQALDRLGCRFQGSYYFQEQLSRHRTLMNIFDKAPMVDKDAF 60

Query: 1124 VAPSASIIGDVQVGRSSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT 945
            VAPSASIIGDVQVG+ +SIWYGCVLRGDVNSISVG+GTNIQDNSLVHVAKSNLSGKV+PT
Sbjct: 61   VAPSASIIGDVQVGKGASIWYGCVLRGDVNSISVGAGTNIQDNSLVHVAKSNLSGKVIPT 120

Query: 944  IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKHGMVAAGALVRQNTRIPSGEV 765
            IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKHGMVAAGALVRQNT+IP+GEV
Sbjct: 121  IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKHGMVAAGALVRQNTKIPAGEV 180

Query: 764  WGGNPAKLLRKLTEEEITFIAQSATNYSNLAQVHGAENAKPFEEIEFEKGLRKKFARRDE 585
            WGGNPAK LRKLT+EEI FI+QSATNYSNLAQVH AENAKPF+EIEFEK LRKKFARRDE
Sbjct: 181  WGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAENAKPFDEIEFEKVLRKKFARRDE 240

Query: 584  DYDSMLGVVRETPPELILPDNILPDKSAKA 495
            +YDSMLGVVRETPPELILPDN+LPDK  KA
Sbjct: 241  EYDSMLGVVRETPPELILPDNVLPDKEQKA 270


>ref|XP_002302024.1| predicted protein [Populus trichocarpa] gi|118486617|gb|ABK95146.1|
            unknown [Populus trichocarpa] gi|222843750|gb|EEE81297.1|
            predicted protein [Populus trichocarpa]
          Length = 271

 Score =  500 bits (1287), Expect = e-139
 Identities = 245/270 (90%), Positives = 259/270 (95%)
 Frame = -3

Query: 1304 MGTLGKAIYTVGFWIRETGQAIDRLGSRLQGNYYFQEQISRHRTLMNIFDKVPVVDKDAF 1125
            MGTLG+AIYTVGFWIRETGQA+DRLG RLQGNYYFQEQ+SRHRTLMNIFDK PVVDKDAF
Sbjct: 1    MGTLGRAIYTVGFWIRETGQALDRLGGRLQGNYYFQEQLSRHRTLMNIFDKAPVVDKDAF 60

Query: 1124 VAPSASIIGDVQVGRSSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT 945
            VAPSAS+IGDVQVG+ SSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT
Sbjct: 61   VAPSASVIGDVQVGKGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT 120

Query: 944  IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKHGMVAAGALVRQNTRIPSGEV 765
            IIGDNVTVGHSAV+HGCTVEDEAFVGMGATLLDGVVVEKH MVAAGALVRQNTRIP+GEV
Sbjct: 121  IIGDNVTVGHSAVVHGCTVEDEAFVGMGATLLDGVVVEKHAMVAAGALVRQNTRIPTGEV 180

Query: 764  WGGNPAKLLRKLTEEEITFIAQSATNYSNLAQVHGAENAKPFEEIEFEKGLRKKFARRDE 585
            WGGNPAK LRKLT+EEI FIAQSATNYSNLAQVH AENAKPF+EIEFEK LRKKFA++DE
Sbjct: 181  WGGNPAKFLRKLTDEEIAFIAQSATNYSNLAQVHAAENAKPFDEIEFEKVLRKKFAKKDE 240

Query: 584  DYDSMLGVVRETPPELILPDNILPDKSAKA 495
            +YDSMLGVVRE PPELILP+N+LPDK  KA
Sbjct: 241  EYDSMLGVVRELPPELILPNNVLPDKEHKA 270


>ref|XP_002282034.1| PREDICTED: uncharacterized protein DDB_G0288155 isoform 2 [Vitis
            vinifera]
          Length = 280

 Score =  496 bits (1277), Expect = e-138
 Identities = 250/279 (89%), Positives = 257/279 (92%), Gaps = 8/279 (2%)
 Frame = -3

Query: 1304 MGTLGKAIYTVGFWIRETGQAIDRLGSRLQGNYYFQEQISRHRTLMNIFDKVPVVDKDAF 1125
            MGTLGKAIYTVGFWIRETGQAIDRLG RLQGNYYF EQISRHRTLMN+FDK P+VDKDAF
Sbjct: 1    MGTLGKAIYTVGFWIRETGQAIDRLGCRLQGNYYFLEQISRHRTLMNLFDKAPIVDKDAF 60

Query: 1124 VAPSASIIGDVQVGRSSSIWYGCVLRG--------DVNSISVGSGTNIQDNSLVHVAKSN 969
            VAPSASIIGDVQVGR SSIWYGCVLRG        DVNSISVGSGTNIQDNSLVHVAKSN
Sbjct: 61   VAPSASIIGDVQVGRGSSIWYGCVLRGKMLWSKLGDVNSISVGSGTNIQDNSLVHVAKSN 120

Query: 968  LSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKHGMVAAGALVRQN 789
            LSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDG +VEKH MVAAGALVRQN
Sbjct: 121  LSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGSIVEKHAMVAAGALVRQN 180

Query: 788  TRIPSGEVWGGNPAKLLRKLTEEEITFIAQSATNYSNLAQVHGAENAKPFEEIEFEKGLR 609
            TRIP GEVWGGNPAK LRKLT+EEI FI+QSA NYSNLAQVH AENAKPF+EIEFEK LR
Sbjct: 181  TRIPCGEVWGGNPAKFLRKLTDEEIAFISQSAINYSNLAQVHAAENAKPFDEIEFEKVLR 240

Query: 608  KKFARRDEDYDSMLGVVRETPPELILPDNILPDKSAKAS 492
            KKFARRDEDYDSMLGVVRETPPELILPDNILPDK+ K S
Sbjct: 241  KKFARRDEDYDSMLGVVRETPPELILPDNILPDKAPKVS 279


>ref|XP_004152688.1| PREDICTED: gamma carbonic anhydrase 1, mitochondrial-like [Cucumis
            sativus] gi|449520036|ref|XP_004167040.1| PREDICTED:
            gamma carbonic anhydrase 1, mitochondrial-like [Cucumis
            sativus]
          Length = 273

 Score =  496 bits (1276), Expect = e-138
 Identities = 245/269 (91%), Positives = 256/269 (95%)
 Frame = -3

Query: 1304 MGTLGKAIYTVGFWIRETGQAIDRLGSRLQGNYYFQEQISRHRTLMNIFDKVPVVDKDAF 1125
            MGTLGKAIYTVGFWIRETGQAIDRLG RLQG Y+FQEQ+SRHRTLMN+FDK PVVDKDAF
Sbjct: 1    MGTLGKAIYTVGFWIRETGQAIDRLGCRLQGRYFFQEQLSRHRTLMNVFDKAPVVDKDAF 60

Query: 1124 VAPSASIIGDVQVGRSSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT 945
            VAPSASIIGDVQVGR SSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT
Sbjct: 61   VAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT 120

Query: 944  IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKHGMVAAGALVRQNTRIPSGEV 765
            IIGDNVT+GHSAV+HGCTVEDEAFVGMGATLLDGVVVEK+ MVAAGALVRQNT+IPSGEV
Sbjct: 121  IIGDNVTIGHSAVIHGCTVEDEAFVGMGATLLDGVVVEKNAMVAAGALVRQNTKIPSGEV 180

Query: 764  WGGNPAKLLRKLTEEEITFIAQSATNYSNLAQVHGAENAKPFEEIEFEKGLRKKFARRDE 585
            WGGNPAK LRKLT+EEI FI+QSATNY NL+QVH AENAK F+EIEFEK LRKKFARRDE
Sbjct: 181  WGGNPAKFLRKLTDEEIAFISQSATNYLNLSQVHAAENAKSFDEIEFEKVLRKKFARRDE 240

Query: 584  DYDSMLGVVRETPPELILPDNILPDKSAK 498
            DYDSMLGVVRETPPELILPDNILPDK  K
Sbjct: 241  DYDSMLGVVRETPPELILPDNILPDKDPK 269


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