BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004375
         (2093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147840.1| PREDICTED: protein RCC2 homolog [Cucumis sat...   749   0.0  
ref|XP_002301995.1| predicted protein [Populus trichocarpa] gi|2...   747   0.0  
ref|XP_003523611.1| PREDICTED: protein RCC2-like [Glycine max]        742   0.0  
ref|XP_002510496.1| Protein RCC2, putative [Ricinus communis] gi...   738   0.0  
ref|XP_002306909.1| predicted protein [Populus trichocarpa] gi|2...   732   0.0  

>ref|XP_004147840.1| PREDICTED: protein RCC2 homolog [Cucumis sativus]
          Length = 543

 Score =  749 bits (1934), Expect = 0.0
 Identities = 360/467 (77%), Positives = 403/467 (86%), Gaps = 6/467 (1%)
 Frame = +1

Query: 133  MSGVEAEGNVE--KKVEEKSGEILFCGGTCWDMFGRKGIPAETNLISPTRLRPLVGVDIR 306
            MS ++    VE  K+ EEK+GE+LFCG T WD+ GRK  P E NL+SPTRLRPLVG+DIR
Sbjct: 1    MSTLDDGSKVEEVKEKEEKAGELLFCGATSWDIIGRKKGPVEGNLVSPTRLRPLVGIDIR 60

Query: 307  FVASGSTSAHCVALDVEGRCYTWGRNKNGQLGHGDMIQRDRPTVVSGLSKYKIVTAGAGR 486
            FVASG TS HCVALDVEGRCYTWGRN+ GQLGHGD+IQRDRPT+VS LSKYK+V AGAGR
Sbjct: 61   FVASGCTSCHCVALDVEGRCYTWGRNEKGQLGHGDLIQRDRPTIVSDLSKYKVVKAGAGR 120

Query: 487  NHTVVVTDDGNSFSFGWNKHGQLGSGSLKNECEQSPVRCQVSEVTTAVCGGEFTVWLSSV 666
            NHTVVVT+DGNS SFGWNKHGQLGSGS+KNE E SPVRC VSEV T  CGGEFT WL+S+
Sbjct: 121  NHTVVVTEDGNSLSFGWNKHGQLGSGSIKNEIESSPVRCLVSEVKTTACGGEFTAWLTSI 180

Query: 667  EGSSILTAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPKAIASLAGKTIVKVACGTN 846
            EG+SILTAGLPQYGQLGHGTDNEYNTKDSSV+LAYEAQPRP+AIASLAG+ IVKVACGTN
Sbjct: 181  EGASILTAGLPQYGQLGHGTDNEYNTKDSSVRLAYEAQPRPRAIASLAGEKIVKVACGTN 240

Query: 847  HTVAVDSKGFVYTWGYGGYGRLGHREQKDEWAPRLVEVFQRNNVLPPDAVISAGSVNCAC 1026
            HTVAVDS GFVYTWG+GGYGRLGH+EQKDEWAPR V++FQR N LPPDA+ISAGSVN +C
Sbjct: 241  HTVAVDSNGFVYTWGFGGYGRLGHKEQKDEWAPRRVDIFQRRNTLPPDAIISAGSVNSSC 300

Query: 1027 TAGGGQLYMWGKLKNNGDDWMYPKPLLDLSGWNIRCMDSGSMHHFVGADDSCISWGVAQN 1206
            TAGGGQLYMWGK+KN GDDWMYPKPL+DLSGWNIRCMDSG+MHHFVGAD+SCISWG AQ 
Sbjct: 301  TAGGGQLYMWGKIKNAGDDWMYPKPLMDLSGWNIRCMDSGNMHHFVGADNSCISWGHAQY 360

Query: 1207 GELGHGPMGPKSSANPKKVEILNSMHVISVACGLAHSLIVVDRTNVVDRLDQLEVYDGKP 1386
            GELG+GPMG KSSA PKKV+IL +MHVISVACG  HS++VVDRTNV DRLDQL+++DGK 
Sbjct: 361  GELGYGPMGQKSSALPKKVDILENMHVISVACGAGHSMVVVDRTNVADRLDQLDIHDGKA 420

Query: 1387 PGEGSAVLENESPAKKT---PKQGASKAS-PNNKRKKSKDVSDSEDE 1515
              E + VLE    +K +   P   A+KAS    KRKKSKD SDSE+E
Sbjct: 421  FDEVNVVLEAVPQSKGSAIKPSSKAAKASLKAKKRKKSKDSSDSEEE 467


>ref|XP_002301995.1| predicted protein [Populus trichocarpa] gi|222843721|gb|EEE81268.1|
            predicted protein [Populus trichocarpa]
          Length = 550

 Score =  747 bits (1929), Expect = 0.0
 Identities = 355/473 (75%), Positives = 404/473 (85%), Gaps = 12/473 (2%)
 Frame = +1

Query: 133  MSGVEAEGNVE--KKVEEKSGEILFCGGTCWDMFGRKGIPAETNLISPTRLRPLVGVDIR 306
            MS VEAE   E  KK EEK GE+LFCG TCWD+ GRK    E NL+SPTRLRPLVGV+IR
Sbjct: 1    MSTVEAEKKAEEEKKAEEKGGELLFCGATCWDIIGRKKGAQEGNLVSPTRLRPLVGVNIR 60

Query: 307  FVASGSTSAHCVALDVEGRCYTWGRNKNGQLGHGDMIQRDRPTVVSGLSKYKIVTAGAGR 486
            FVASGS S HCVALDVEGRCYTWGRN+ GQLGHGD IQRDRPTVVS LSKYK++ AGAGR
Sbjct: 61   FVASGSASCHCVALDVEGRCYTWGRNERGQLGHGDTIQRDRPTVVSELSKYKLIKAGAGR 120

Query: 487  NHTVVVTDDGNSFSFGWNKHGQLGSGSLKNECEQSPVRCQVSEVTTAVCGGEFTVWLSSV 666
            +HTVVVT+DG S +FGWNKHGQLGSGS +NE E SPVRC VS+V T  CG +FTVWLSSV
Sbjct: 121  SHTVVVTEDGLSLAFGWNKHGQLGSGSARNEIESSPVRCLVSDVKTTACGADFTVWLSSV 180

Query: 667  EGSSILTAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPKAIASLAGKTIVKVACGTN 846
            EG+SIL+AGLPQYGQLGHGTDNEYNTKDSSV+LAYEAQPRP+A+ +LA +TIVKVACGTN
Sbjct: 181  EGASILSAGLPQYGQLGHGTDNEYNTKDSSVRLAYEAQPRPRALTALARETIVKVACGTN 240

Query: 847  HTVAVDSKGFVYTWGYGGYGRLGHREQKDEWAPRLVEVFQRNNVLPPDAVISAGSVNCAC 1026
            HTVAVDS G+VYTWG+GGYGRLGHREQKDEW PR V+VF ++NVLPPDAVISAGSVN AC
Sbjct: 241  HTVAVDSNGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFSKHNVLPPDAVISAGSVNSAC 300

Query: 1027 TAGGGQLYMWGKLKNNGDDWMYPKPLLDLSGWNIRCMDSGSMHHFVGADDSCISWGVAQN 1206
            TAGGGQLYMWGK+KN GDDWMYPKPL+DLSGWN+RCMDSG+MHHFVGAD+SCISWG AQN
Sbjct: 301  TAGGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADNSCISWGHAQN 360

Query: 1207 GELGHGPMGPKSSANPKKVEILNSMHVISVACGLAHSLIVVDRTNVVDRLDQLEVYDGKP 1386
            GELG+GP G KSSA PKKV+IL  MHVI VACG+ HS+++VDR NV D+LDQL+VYDGK 
Sbjct: 361  GELGYGPSGQKSSAVPKKVDILEGMHVIGVACGMGHSMVIVDRMNVGDQLDQLDVYDGKA 420

Query: 1387 PG----------EGSAVLENESPAKKTPKQGASKASPNNKRKKSKDVSDSEDE 1515
             G          EGS   E ++P K++ K+GA+KAS N++++KSKD S+SEDE
Sbjct: 421  SGEAKGFPKDINEGSGEPERKNPVKQSAKKGAAKASDNSRKRKSKDSSESEDE 473


>ref|XP_003523611.1| PREDICTED: protein RCC2-like [Glycine max]
          Length = 538

 Score =  742 bits (1916), Expect = 0.0
 Identities = 348/464 (75%), Positives = 393/464 (84%), Gaps = 3/464 (0%)
 Frame = +1

Query: 133  MSGVEAEGNVE---KKVEEKSGEILFCGGTCWDMFGRKGIPAETNLISPTRLRPLVGVDI 303
            MS  EAE  VE   KK E K GE+LFCG TCWD+ GR+  P + NL+SP+RLRPLVGVDI
Sbjct: 1    MSASEAEKKVEEEEKKEEVKGGELLFCGATCWDIIGRRKGPVDGNLVSPSRLRPLVGVDI 60

Query: 304  RFVASGSTSAHCVALDVEGRCYTWGRNKNGQLGHGDMIQRDRPTVVSGLSKYKIVTAGAG 483
            R+VASG  S HCVALDVEGRCYTWGRN+ GQLGHGD IQRDRPTVVS LSKYKIV AG+G
Sbjct: 61   RYVASGCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVKAGSG 120

Query: 484  RNHTVVVTDDGNSFSFGWNKHGQLGSGSLKNECEQSPVRCQVSEVTTAVCGGEFTVWLSS 663
            R+HTVVVTDDGNS +FGWNKHGQLGSGS++NE E SPVRC VSEV    CGG+FTVWLSS
Sbjct: 121  RSHTVVVTDDGNSLAFGWNKHGQLGSGSVRNEIESSPVRCLVSEVKHTACGGDFTVWLSS 180

Query: 664  VEGSSILTAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPKAIASLAGKTIVKVACGT 843
            +EG+SILTAGLPQYGQLGHGTDNEYN+KDSSV+L YE QPRP+AIA+LAG+ IVKVACGT
Sbjct: 181  IEGASILTAGLPQYGQLGHGTDNEYNSKDSSVRLVYEPQPRPRAIAALAGEAIVKVACGT 240

Query: 844  NHTVAVDSKGFVYTWGYGGYGRLGHREQKDEWAPRLVEVFQRNNVLPPDAVISAGSVNCA 1023
            NHTVAVD  GFVYTWG+GGYGRLGHREQKDEW PR VEVFQ  NVLPPDA+ISAGSVN +
Sbjct: 241  NHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWVPRRVEVFQNRNVLPPDAIISAGSVNSS 300

Query: 1024 CTAGGGQLYMWGKLKNNGDDWMYPKPLLDLSGWNIRCMDSGSMHHFVGADDSCISWGVAQ 1203
            CTAGGGQLYMWGKLKN GDDWMYPKPL+DLSGWN+ CMDSG+MHHFVGAD SCISWG AQ
Sbjct: 301  CTAGGGQLYMWGKLKNTGDDWMYPKPLMDLSGWNLLCMDSGNMHHFVGADSSCISWGHAQ 360

Query: 1204 NGELGHGPMGPKSSANPKKVEILNSMHVISVACGLAHSLIVVDRTNVVDRLDQLEVYDGK 1383
            NGELG+GP G KSSA PKKV++L  MHVISVACG+ HS+++VDR NV DRLDQL++YDGK
Sbjct: 361  NGELGYGPTGQKSSAVPKKVDLLEGMHVISVACGMGHSMVIVDRANVADRLDQLDIYDGK 420

Query: 1384 PPGEGSAVLENESPAKKTPKQGASKASPNNKRKKSKDVSDSEDE 1515
              GEG+  +      K+  K+GA  A  + KRK+SKD SDS+++
Sbjct: 421  AVGEGNEAVNTTPVPKQAAKKGAKGADNSKKRKQSKDSSDSDED 464


>ref|XP_002510496.1| Protein RCC2, putative [Ricinus communis] gi|223551197|gb|EEF52683.1|
            Protein RCC2, putative [Ricinus communis]
          Length = 529

 Score =  738 bits (1905), Expect = 0.0
 Identities = 355/467 (76%), Positives = 400/467 (85%), Gaps = 6/467 (1%)
 Frame = +1

Query: 133  MSGVEAE--GNVEKKVE--EKSGEILFCGGTCWDMFGRKGIPAETNLISPTRLRPLVGVD 300
            MS VE +  G+ E +V   EK GE+LFCG TCWD+ GRK    E NLISPTRLRPLVGVD
Sbjct: 1    MSAVEEDKKGDEENEVAAAEKGGELLFCGATCWDIIGRKKGAQEGNLISPTRLRPLVGVD 60

Query: 301  IRFVASGSTSAHCVALDVEGRCYTWGRNKNGQLGHGDMIQRDRPTVVSGLSKYKIVTAGA 480
            IRFVASG +S HCVALDVEGRCYTWGRN+ GQLGHGD IQRDRPTVVS LSKYKI+ AGA
Sbjct: 61   IRFVASGCSSCHCVALDVEGRCYTWGRNEKGQLGHGDRIQRDRPTVVSELSKYKIIRAGA 120

Query: 481  GRNHTVVVTDDGNSFSFGWNKHGQLGSGSLKNECEQSPVRCQVSEVTTAVCGGEFTVWLS 660
            GR+HTVVVT+DG S +FGWNKHGQLGSGS K+E E SPVRC VS+V    CG EFTVWLS
Sbjct: 121  GRSHTVVVTEDGLSLAFGWNKHGQLGSGSAKSEVESSPVRCLVSDVKNTACGAEFTVWLS 180

Query: 661  SVEGSSILTAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPKAIASLAGKTIVKVACG 840
            SVEG+SILTAGLPQYGQLGHGTDNEYNTKDSSV+LAYEAQPRP+AIASL+G+TIVKVACG
Sbjct: 181  SVEGASILTAGLPQYGQLGHGTDNEYNTKDSSVRLAYEAQPRPRAIASLSGETIVKVACG 240

Query: 841  TNHTVAVDSKGFVYTWGYGGYGRLGHREQKDEWAPRLVEVFQRNNVLPPDAVISAGSVNC 1020
            TNHTVAVDS G+VYTWG+GGYGRLGHREQKDEW PR V+VFQR+NVLPPDAV+SAGSVN 
Sbjct: 241  TNHTVAVDSNGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRHNVLPPDAVVSAGSVNS 300

Query: 1021 ACTAGGGQLYMWGKLKNNGDDWMYPKPLLDLSGWNIRCMDSGSMHHFVGADDSCISWGVA 1200
            +CTAGGGQLYMWGK+KN GDDWMYPKPL+DLSGWN+RCMDSG+MHHFVGAD+SCISWG A
Sbjct: 301  SCTAGGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADNSCISWGHA 360

Query: 1201 QNGELGHGPMGPKSSANPKKVEILNSMHVISVACGLAHSLIVVDRTNVVDRLDQLEVYDG 1380
            Q GELG+GP   KSSA PKKV+IL  MHVI VACG+ HS+++VDR NV +RL+QL++YDG
Sbjct: 361  QYGELGYGPNAQKSSAVPKKVDILEGMHVIGVACGMGHSMVIVDRANVDNRLEQLDIYDG 420

Query: 1381 KPPGEGSAVLENESPAKKTPKQGASKASPNN--KRKKSKDVSDSEDE 1515
            K  GEGS   EN++PA K   + A+  S NN  KRKKSKD S+SE+E
Sbjct: 421  KASGEGSEEPENKAPAAKQNAKKAAARSSNNSKKRKKSKDSSESEEE 467


>ref|XP_002306909.1| predicted protein [Populus trichocarpa] gi|222856358|gb|EEE93905.1|
            predicted protein [Populus trichocarpa]
          Length = 539

 Score =  732 bits (1890), Expect = 0.0
 Identities = 346/463 (74%), Positives = 397/463 (85%), Gaps = 2/463 (0%)
 Frame = +1

Query: 133  MSGVEAEGNV--EKKVEEKSGEILFCGGTCWDMFGRKGIPAETNLISPTRLRPLVGVDIR 306
            MS VEAE     E KVEEK GE+LFCG TCW++ GRK    E NL+SP+RLRPLVGVDIR
Sbjct: 1    MSAVEAEKKAAEETKVEEKGGELLFCGATCWNVVGRKKGAQEGNLVSPSRLRPLVGVDIR 60

Query: 307  FVASGSTSAHCVALDVEGRCYTWGRNKNGQLGHGDMIQRDRPTVVSGLSKYKIVTAGAGR 486
             VASGS S HCVALDVEGRCYTWGRN+ GQLGHGD IQRDRPTVVS LSKYK++ AGAGR
Sbjct: 61   VVASGSASCHCVALDVEGRCYTWGRNERGQLGHGDTIQRDRPTVVSELSKYKLIRAGAGR 120

Query: 487  NHTVVVTDDGNSFSFGWNKHGQLGSGSLKNECEQSPVRCQVSEVTTAVCGGEFTVWLSSV 666
            +H+VVVT+DG S +FGWNKHGQLGSGS +NE E SPVRC VS+V T  CG +FTVWLSSV
Sbjct: 121  SHSVVVTEDGLSLAFGWNKHGQLGSGSARNEIESSPVRCLVSDVKTTACGADFTVWLSSV 180

Query: 667  EGSSILTAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPKAIASLAGKTIVKVACGTN 846
            EG+SIL+AGLPQYGQLGHGTD EYNTKDSSV+LAYEAQPRP+AIASLAG+TIVKVACGTN
Sbjct: 181  EGASILSAGLPQYGQLGHGTDKEYNTKDSSVRLAYEAQPRPRAIASLAGETIVKVACGTN 240

Query: 847  HTVAVDSKGFVYTWGYGGYGRLGHREQKDEWAPRLVEVFQRNNVLPPDAVISAGSVNCAC 1026
            HTVAVDS G+VYTWG+GGYGRLGHREQKDEW PR V++F ++NVLPP AVISAGSV+ AC
Sbjct: 241  HTVAVDSNGYVYTWGFGGYGRLGHREQKDEWVPRRVDIFTKHNVLPPGAVISAGSVSSAC 300

Query: 1027 TAGGGQLYMWGKLKNNGDDWMYPKPLLDLSGWNIRCMDSGSMHHFVGADDSCISWGVAQN 1206
            TAGGGQLYMWGK+KN GDDWMYPKPL+DLSGWN+RCMDSG+MHHFVGAD+SCISWG A N
Sbjct: 301  TAGGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADNSCISWGYALN 360

Query: 1207 GELGHGPMGPKSSANPKKVEILNSMHVISVACGLAHSLIVVDRTNVVDRLDQLEVYDGKP 1386
            GELG+GP G KSSA PKKV+IL  MHVI VACG  HS+++VDRTNV D LDQL+VYDGK 
Sbjct: 361  GELGYGPNGQKSSAVPKKVDILEGMHVIGVACGTGHSMVIVDRTNVGDGLDQLDVYDGKA 420

Query: 1387 PGEGSAVLENESPAKKTPKQGASKASPNNKRKKSKDVSDSEDE 1515
              EGS    ++   K++ K+GA+KA+  ++++KSKD S+SE+E
Sbjct: 421  SDEGSGEPGSKDHVKQSGKKGAAKATDKSRKRKSKDASESEEE 463