BLASTX nr result

ID: Coptis24_contig00004364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004364
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35099.3| unnamed protein product [Vitis vinifera]              219   e-106
ref|XP_003633521.1| PREDICTED: uncharacterized protein LOC100853...   219   e-106
ref|XP_002529994.1| conserved hypothetical protein [Ricinus comm...   218   e-105
emb|CBI24268.3| unnamed protein product [Vitis vinifera]              221   e-102
ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263...   221   e-102

>emb|CBI35099.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  219 bits (558), Expect(2) = e-106
 Identities = 104/128 (81%), Positives = 113/128 (88%)
 Frame = -1

Query: 410 RGVPLSEALLMHDKWLEDKGIKHTNFAVVTWSNWDCRVMLESECRFKRIRKPPYFNRWIN 231
           RGV LSEALL HDKWLE KGIK+TNFAVVTWSNWDCRVMLESECRFK+IRKPPYFNRWIN
Sbjct: 314 RGVTLSEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWIN 373

Query: 230 LRVPFNEVFGGVRCNLKEAVQLAGLAWEGRAHCGLDDARNTARLIAKLCCCGFRFSITN* 51
           L+VPF EVFGGV CNLKEAV++AGLAW+GRAHCGLDDA+NTARL+A L   GF+FSITN 
Sbjct: 374 LKVPFREVFGGVWCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAFLMHRGFKFSITN- 432

Query: 50  QR*TSLKW 27
               SL W
Sbjct: 433 ----SLMW 436



 Score =  196 bits (497), Expect(2) = e-106
 Identities = 104/196 (53%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
 Frame = -3

Query: 1098 ERNMEKNL-CLQTKVYPYKLQDNGNSV*DVPELKNGAIANPGNGAVEPASSLNNESFAPP 922
            +RN E ++ CLQ+K +PYKL   GN +    ELK+    + G   VE   SL++ES  P 
Sbjct: 116  QRNCEASVKCLQSKRFPYKLPCKGNPIEGFSELKDETSVHAGGDIVERERSLSSESLKPS 175

Query: 921  NEGYYRPVYQQDIWMWSNFHPDFHKVQQNQWNGFESFSLLNREYNFPVGGRVQYLPFRMF 742
            NE + +P+YQ D   W  F+PD  KVQQ Q N FES     + Y FPV  +  Y PF  F
Sbjct: 176  NEFHNKPIYQNDFGSWPTFYPDSQKVQQCQLNAFES-----QYYPFPVDNQFLYAPFHAF 230

Query: 741  SQCYPXXXXXXXXXXFVVMDFEATCDKDRNPHPKEIIEFPSVLVNSVTGQLEASFQTYVR 562
            SQ YP          FVV+DFEATCDK +NPHP+EIIEFPSV+V+SVTGQLEA FQTYVR
Sbjct: 231  SQGYPYEFMLQDFQYFVVIDFEATCDKGKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVR 290

Query: 561  PVYHQHLSDFCKELTG 514
            P  +Q LSDFCK+LTG
Sbjct: 291  PTCNQILSDFCKDLTG 306


>ref|XP_003633521.1| PREDICTED: uncharacterized protein LOC100853630 [Vitis vinifera]
          Length = 415

 Score =  219 bits (558), Expect(2) = e-106
 Identities = 104/128 (81%), Positives = 113/128 (88%)
 Frame = -1

Query: 410 RGVPLSEALLMHDKWLEDKGIKHTNFAVVTWSNWDCRVMLESECRFKRIRKPPYFNRWIN 231
           RGV LSEALL HDKWLE KGIK+TNFAVVTWSNWDCRVMLESECRFK+IRKPPYFNRWIN
Sbjct: 209 RGVTLSEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWIN 268

Query: 230 LRVPFNEVFGGVRCNLKEAVQLAGLAWEGRAHCGLDDARNTARLIAKLCCCGFRFSITN* 51
           L+VPF EVFGGV CNLKEAV++AGLAW+GRAHCGLDDA+NTARL+A L   GF+FSITN 
Sbjct: 269 LKVPFREVFGGVWCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAFLMHRGFKFSITN- 327

Query: 50  QR*TSLKW 27
               SL W
Sbjct: 328 ----SLMW 331



 Score =  196 bits (497), Expect(2) = e-106
 Identities = 104/196 (53%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
 Frame = -3

Query: 1098 ERNMEKNL-CLQTKVYPYKLQDNGNSV*DVPELKNGAIANPGNGAVEPASSLNNESFAPP 922
            +RN E ++ CLQ+K +PYKL   GN +    ELK+    + G   VE   SL++ES  P 
Sbjct: 11   QRNCEASVKCLQSKRFPYKLPCKGNPIEGFSELKDETSVHAGGDIVERERSLSSESLKPS 70

Query: 921  NEGYYRPVYQQDIWMWSNFHPDFHKVQQNQWNGFESFSLLNREYNFPVGGRVQYLPFRMF 742
            NE + +P+YQ D   W  F+PD  KVQQ Q N FES     + Y FPV  +  Y PF  F
Sbjct: 71   NEFHNKPIYQNDFGSWPTFYPDSQKVQQCQLNAFES-----QYYPFPVDNQFLYAPFHAF 125

Query: 741  SQCYPXXXXXXXXXXFVVMDFEATCDKDRNPHPKEIIEFPSVLVNSVTGQLEASFQTYVR 562
            SQ YP          FVV+DFEATCDK +NPHP+EIIEFPSV+V+SVTGQLEA FQTYVR
Sbjct: 126  SQGYPYEFMLQDFQYFVVIDFEATCDKGKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVR 185

Query: 561  PVYHQHLSDFCKELTG 514
            P  +Q LSDFCK+LTG
Sbjct: 186  PTCNQILSDFCKDLTG 201


>ref|XP_002529994.1| conserved hypothetical protein [Ricinus communis]
           gi|223530517|gb|EEF32399.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score =  218 bits (555), Expect(2) = e-105
 Identities = 103/128 (80%), Positives = 113/128 (88%)
 Frame = -1

Query: 410 RGVPLSEALLMHDKWLEDKGIKHTNFAVVTWSNWDCRVMLESECRFKRIRKPPYFNRWIN 231
           RGV LSEALL HDKWLE KGIK+T+FAVVTWSNWDCRVMLESECRFK+IRKPPYFNRWIN
Sbjct: 204 RGVTLSEALLRHDKWLEKKGIKNTSFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWIN 263

Query: 230 LRVPFNEVFGGVRCNLKEAVQLAGLAWEGRAHCGLDDARNTARLIAKLCCCGFRFSITN* 51
           L+VPF EVFGGVRCNLKEAV++AGLAW+GRAHCGLDDA+NTARL+A L   G +FSITN 
Sbjct: 264 LKVPFREVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAFLMRKGIKFSITN- 322

Query: 50  QR*TSLKW 27
               SL W
Sbjct: 323 ----SLMW 326



 Score =  192 bits (487), Expect(2) = e-105
 Identities = 103/200 (51%), Positives = 128/200 (64%), Gaps = 1/200 (0%)
 Frame = -3

Query: 1110 QRRFERNMEKNL-CLQTKVYPYKLQDNGNSV*DVPELKNGAIANPGNGAVEPASSLNNES 934
            Q   +R+ E +L CLQTK +PY     GN +   PELK     +PG   VEP  ++++E 
Sbjct: 7    QETIQRSCEASLKCLQTKGFPY-----GNPIDVFPELKEAISVHPGGDVVEPVHTVSSEF 61

Query: 933  FAPPNEGYYRPVYQQDIWMWSNFHPDFHKVQQNQWNGFESFSLLNREYNFPVGGRVQYLP 754
               P+E + +P Y  D   WS F+PD  KVQQ Q N FES     + Y FP+  R  Y P
Sbjct: 62   LELPSEFHTKPTYHHDFGSWSTFYPDSQKVQQCQVNCFES-----QFYPFPMETRYHYAP 116

Query: 753  FRMFSQCYPXXXXXXXXXXFVVMDFEATCDKDRNPHPKEIIEFPSVLVNSVTGQLEASFQ 574
            F ++SQ  P          FVV+DFEATCDK+RNPHP+EIIEFPSV+V+SVTGQLEA FQ
Sbjct: 117  FNIYSQGCPYELHFQDFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQ 176

Query: 573  TYVRPVYHQHLSDFCKELTG 514
            TYVRP  +QHLSDFCK+LTG
Sbjct: 177  TYVRPTCNQHLSDFCKDLTG 196


>emb|CBI24268.3| unnamed protein product [Vitis vinifera]
          Length = 431

 Score =  221 bits (563), Expect(2) = e-102
 Identities = 105/129 (81%), Positives = 113/129 (87%)
 Frame = -1

Query: 407 GVPLSEALLMHDKWLEDKGIKHTNFAVVTWSNWDCRVMLESECRFKRIRKPPYFNRWINL 228
           GV LSEALLMHD+WLE KGIKHTNFAVVTWS+WDCRVMLESECRFKRIRKPPYFNRWINL
Sbjct: 237 GVLLSEALLMHDRWLEQKGIKHTNFAVVTWSDWDCRVMLESECRFKRIRKPPYFNRWINL 296

Query: 227 RVPFNEVFGGVRCNLKEAVQLAGLAWEGRAHCGLDDARNTARLIAKLCCCGFRFSITN*Q 48
           +VPF+EVFG +RCNLKEAVQ AGL WEGRAHCGLDDA+NTARL+A +   GFRFSITN  
Sbjct: 297 KVPFHEVFGNIRCNLKEAVQRAGLLWEGRAHCGLDDAKNTARLLAHIMHRGFRFSITN-- 354

Query: 47  R*TSLKWTS 21
              SL W S
Sbjct: 355 ---SLIWQS 360



 Score =  177 bits (449), Expect(2) = e-102
 Identities = 98/204 (48%), Positives = 129/204 (63%), Gaps = 4/204 (1%)
 Frame = -3

Query: 1113 LQRRFERNMEKNLCLQTKVYPYKLQDNGNSV*DVPELKNGAIANPGNGAVEPASSLNNES 934
            +Q+ +E +M    CLQ+K +PY  Q N + V  +P +K+    +   G +E   S + ES
Sbjct: 28   MQKAWEASMR---CLQSKAFPYNPQFNVSFVEGLPGVKDEVHTDCRGGIIEGDCSSSIES 84

Query: 933  FAPPNEGYYRPVYQQDIWMWSNFHPDFHKVQQNQWNGFES-FSLLNREYNFPVGGRVQYL 757
             APPNEGYY P++ QD +  S  HP   K   NQ++  ES F  +N +  FP+  +  Y+
Sbjct: 85   IAPPNEGYYGPMHLQDYYQRSTSHPYIQKAHHNQFHMVESHFYPMNHKSCFPMDNQPHYV 144

Query: 756  PF---RMFSQCYPXXXXXXXXXXFVVMDFEATCDKDRNPHPKEIIEFPSVLVNSVTGQLE 586
            PF   +M SQ +P          FVV+DFEATCDK++NPHP+EIIEFPSVLVNS+TGQLE
Sbjct: 145  PFLPLKMLSQSHPQDFHFQEFQYFVVIDFEATCDKEKNPHPQEIIEFPSVLVNSMTGQLE 204

Query: 585  ASFQTYVRPVYHQHLSDFCKELTG 514
             SFQ YVRP  +  LSDFCKELTG
Sbjct: 205  DSFQIYVRPTCNHLLSDFCKELTG 228


>ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263388 [Vitis vinifera]
          Length = 425

 Score =  221 bits (563), Expect(2) = e-102
 Identities = 105/129 (81%), Positives = 113/129 (87%)
 Frame = -1

Query: 407 GVPLSEALLMHDKWLEDKGIKHTNFAVVTWSNWDCRVMLESECRFKRIRKPPYFNRWINL 228
           GV LSEALLMHD+WLE KGIKHTNFAVVTWS+WDCRVMLESECRFKRIRKPPYFNRWINL
Sbjct: 210 GVLLSEALLMHDRWLEQKGIKHTNFAVVTWSDWDCRVMLESECRFKRIRKPPYFNRWINL 269

Query: 227 RVPFNEVFGGVRCNLKEAVQLAGLAWEGRAHCGLDDARNTARLIAKLCCCGFRFSITN*Q 48
           +VPF+EVFG +RCNLKEAVQ AGL WEGRAHCGLDDA+NTARL+A +   GFRFSITN  
Sbjct: 270 KVPFHEVFGNIRCNLKEAVQRAGLLWEGRAHCGLDDAKNTARLLAHIMHRGFRFSITN-- 327

Query: 47  R*TSLKWTS 21
              SL W S
Sbjct: 328 ---SLIWQS 333



 Score =  177 bits (449), Expect(2) = e-102
 Identities = 98/204 (48%), Positives = 129/204 (63%), Gaps = 4/204 (1%)
 Frame = -3

Query: 1113 LQRRFERNMEKNLCLQTKVYPYKLQDNGNSV*DVPELKNGAIANPGNGAVEPASSLNNES 934
            +Q+ +E +M    CLQ+K +PY  Q N + V  +P +K+    +   G +E   S + ES
Sbjct: 1    MQKAWEASMR---CLQSKAFPYNPQFNVSFVEGLPGVKDEVHTDCRGGIIEGDCSSSIES 57

Query: 933  FAPPNEGYYRPVYQQDIWMWSNFHPDFHKVQQNQWNGFES-FSLLNREYNFPVGGRVQYL 757
             APPNEGYY P++ QD +  S  HP   K   NQ++  ES F  +N +  FP+  +  Y+
Sbjct: 58   IAPPNEGYYGPMHLQDYYQRSTSHPYIQKAHHNQFHMVESHFYPMNHKSCFPMDNQPHYV 117

Query: 756  PF---RMFSQCYPXXXXXXXXXXFVVMDFEATCDKDRNPHPKEIIEFPSVLVNSVTGQLE 586
            PF   +M SQ +P          FVV+DFEATCDK++NPHP+EIIEFPSVLVNS+TGQLE
Sbjct: 118  PFLPLKMLSQSHPQDFHFQEFQYFVVIDFEATCDKEKNPHPQEIIEFPSVLVNSMTGQLE 177

Query: 585  ASFQTYVRPVYHQHLSDFCKELTG 514
             SFQ YVRP  +  LSDFCKELTG
Sbjct: 178  DSFQIYVRPTCNHLLSDFCKELTG 201


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