BLASTX nr result

ID: Coptis24_contig00004361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004361
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
gb|ACN59328.1| leucine-rich repeat receptor-like protein kinase ...    84   9e-15
ref|NP_190293.1| leucine-rich repeat protein kinase-like protein...    84   9e-15
gb|EEC67762.1| hypothetical protein OsI_35295 [Oryza sativa Indi...    83   2e-14
gb|AEH43877.1| EFR [Enarthrocarpus arcuatus]                           83   3e-14

>ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|222867603|gb|EEF04734.1|
           predicted protein [Populus trichocarpa]
          Length = 970

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = +3

Query: 9   LQKLDLEQNNLNGTLPKEIFNIPTL-LYLNFSMNSLTGSLPLEVGKLKNLVDIKVSGNKL 185
           LQ L+L  NNLNGT+P+E+  + +L + L  S NSLTGSL L+VG L NLV++ +SGNKL
Sbjct: 398 LQNLNLSSNNLNGTIPEEVLGLSSLSISLVMSNNSLTGSLSLKVGNLHNLVELDISGNKL 457

Query: 186 SGLIPSTLGEC 218
           SG IPSTLG C
Sbjct: 458 SGTIPSTLGSC 468



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/70 (44%), Positives = 42/70 (60%)
 Frame = +3

Query: 3   SQLQKLDLEQNNLNGTLPKEIFNIPTLLYLNFSMNSLTGSLPLEVGKLKNLVDIKVSGNK 182
           +QL+ L L QN ++G +P EI N+  L  L    N LTGS+P  +GK K L  + +  N+
Sbjct: 300 TQLKILTLGQNLIHGNIPAEIENLVNLNLLGLEGNYLTGSVPDLIGKQKKLEGLHLHVNR 359

Query: 183 LSGLIPSTLG 212
            SG IPS LG
Sbjct: 360 FSGSIPSALG 369


>gb|ACN59328.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis
           thaliana]
          Length = 1009

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/72 (52%), Positives = 53/72 (73%)
 Frame = +3

Query: 3   SQLQKLDLEQNNLNGTLPKEIFNIPTLLYLNFSMNSLTGSLPLEVGKLKNLVDIKVSGNK 182
           S +  L +  N LNGT+PKEI  IPTL++LN   NSL+GSLP ++G+L+NLV++ +  N 
Sbjct: 458 SHMLDLQIGYNKLNGTIPKEIMQIPTLVHLNMESNSLSGSLPNDIGRLQNLVELLLGNNN 517

Query: 183 LSGLIPSTLGEC 218
           LSG +P TLG+C
Sbjct: 518 LSGHLPQTLGKC 529


>ref|NP_190293.1| leucine-rich repeat protein kinase-like protein [Arabidopsis
           thaliana] gi|6522590|emb|CAB61955.1| receptor
           kinase-like protein [Arabidopsis thaliana]
           gi|332644721|gb|AEE78242.1| leucine-rich repeat protein
           kinase-like protein [Arabidopsis thaliana]
          Length = 1009

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/72 (52%), Positives = 53/72 (73%)
 Frame = +3

Query: 3   SQLQKLDLEQNNLNGTLPKEIFNIPTLLYLNFSMNSLTGSLPLEVGKLKNLVDIKVSGNK 182
           S +  L +  N LNGT+PKEI  IPTL++LN   NSL+GSLP ++G+L+NLV++ +  N 
Sbjct: 458 SHMLDLQIGYNKLNGTIPKEIMQIPTLVHLNMESNSLSGSLPNDIGRLQNLVELLLGNNN 517

Query: 183 LSGLIPSTLGEC 218
           LSG +P TLG+C
Sbjct: 518 LSGHLPQTLGKC 529


>gb|EEC67762.1| hypothetical protein OsI_35295 [Oryza sativa Indica Group]
          Length = 571

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/70 (55%), Positives = 52/70 (74%)
 Frame = +3

Query: 9   LQKLDLEQNNLNGTLPKEIFNIPTLLYLNFSMNSLTGSLPLEVGKLKNLVDIKVSGNKLS 188
           L  L + +NNL+G++PKEIF+IPTL  L F+ N+L+G LP EVG  KNL ++++S N LS
Sbjct: 276 LTTLTISRNNLHGSVPKEIFSIPTLAQLGFAFNNLSGELPAEVGNAKNLWNLQLSSNNLS 335

Query: 189 GLIPSTLGEC 218
           G IP TLG C
Sbjct: 336 GDIPDTLGNC 345


>gb|AEH43877.1| EFR [Enarthrocarpus arcuatus]
          Length = 511

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/70 (60%), Positives = 52/70 (74%)
 Frame = +3

Query: 9   LQKLDLEQNNLNGTLPKEIFNIPTLLYLNFSMNSLTGSLPLEVGKLKNLVDIKVSGNKLS 188
           L +L ++ N LNG++P+EI  IP+L YL+ S NSLTGSLP EVGKL+ LV +  S NKLS
Sbjct: 372 LLELWIDTNMLNGSIPREILQIPSLTYLDLSSNSLTGSLPEEVGKLELLVGLAASDNKLS 431

Query: 189 GLIPSTLGEC 218
           G IP TLG C
Sbjct: 432 GRIPQTLGGC 441


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