BLASTX nr result

ID: Coptis24_contig00004344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004344
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ86899.1| predicted protein [Hordeum vulgare subsp. vulgare]    156   1e-35
ref|XP_002468222.1| hypothetical protein SORBIDRAFT_01g042050 [S...   156   1e-35
tpg|DAA44201.1| TPA: hypothetical protein ZEAMMB73_646138 [Zea m...   155   2e-35
tpg|DAA44199.1| TPA: hypothetical protein ZEAMMB73_646138 [Zea m...   155   2e-35
gb|ACL54675.1| unknown [Zea mays]                                     155   2e-35

>dbj|BAJ86899.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 531

 Score =  156 bits (394), Expect = 1e-35
 Identities = 76/83 (91%), Positives = 80/83 (96%)
 Frame = -1

Query: 250 SGEMANYLKTVVAPQVPPELYDSFIAAIDKGHIKTMPNRSMPAAPHLTPGALLMGDAFNM 71
           SGEMANYLKTVVAPQ+PPE+YDSFIAAIDKG I+TMPNRSMPAAPH TPGALLMGDAFNM
Sbjct: 296 SGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNM 355

Query: 70  CHPLTGGGMTVALSDIVVLQNLL 2
            HPLTGGGMTVALSDIVVL+NLL
Sbjct: 356 RHPLTGGGMTVALSDIVVLRNLL 378


>ref|XP_002468222.1| hypothetical protein SORBIDRAFT_01g042050 [Sorghum bicolor]
           gi|241922076|gb|EER95220.1| hypothetical protein
           SORBIDRAFT_01g042050 [Sorghum bicolor]
          Length = 529

 Score =  156 bits (394), Expect = 1e-35
 Identities = 76/83 (91%), Positives = 80/83 (96%)
 Frame = -1

Query: 250 SGEMANYLKTVVAPQVPPELYDSFIAAIDKGHIKTMPNRSMPAAPHLTPGALLMGDAFNM 71
           SGEMANYLKTVVAPQ+PPE+YDSFIAAIDKG I+TMPNRSMPAAPH TPGALLMGDAFNM
Sbjct: 295 SGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNM 354

Query: 70  CHPLTGGGMTVALSDIVVLQNLL 2
            HPLTGGGMTVALSDIVVL+NLL
Sbjct: 355 RHPLTGGGMTVALSDIVVLRNLL 377


>tpg|DAA44201.1| TPA: hypothetical protein ZEAMMB73_646138 [Zea mays]
          Length = 530

 Score =  155 bits (391), Expect = 2e-35
 Identities = 75/83 (90%), Positives = 80/83 (96%)
 Frame = -1

Query: 250 SGEMANYLKTVVAPQVPPELYDSFIAAIDKGHIKTMPNRSMPAAPHLTPGALLMGDAFNM 71
           +GEMANYLKTVVAPQ+PPE+YDSFIAAIDKG I+TMPNRSMPAAPH TPGALLMGDAFNM
Sbjct: 294 TGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNM 353

Query: 70  CHPLTGGGMTVALSDIVVLQNLL 2
            HPLTGGGMTVALSDIVVL+NLL
Sbjct: 354 RHPLTGGGMTVALSDIVVLRNLL 376


>tpg|DAA44199.1| TPA: hypothetical protein ZEAMMB73_646138 [Zea mays]
          Length = 529

 Score =  155 bits (391), Expect = 2e-35
 Identities = 75/83 (90%), Positives = 80/83 (96%)
 Frame = -1

Query: 250 SGEMANYLKTVVAPQVPPELYDSFIAAIDKGHIKTMPNRSMPAAPHLTPGALLMGDAFNM 71
           +GEMANYLKTVVAPQ+PPE+YDSFIAAIDKG I+TMPNRSMPAAPH TPGALLMGDAFNM
Sbjct: 293 TGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNM 352

Query: 70  CHPLTGGGMTVALSDIVVLQNLL 2
            HPLTGGGMTVALSDIVVL+NLL
Sbjct: 353 RHPLTGGGMTVALSDIVVLRNLL 375


>gb|ACL54675.1| unknown [Zea mays]
          Length = 529

 Score =  155 bits (391), Expect = 2e-35
 Identities = 75/83 (90%), Positives = 80/83 (96%)
 Frame = -1

Query: 250 SGEMANYLKTVVAPQVPPELYDSFIAAIDKGHIKTMPNRSMPAAPHLTPGALLMGDAFNM 71
           +GEMANYLKTVVAPQ+PPE+YDSFIAAIDKG I+TMPNRSMPAAPH TPGALLMGDAFNM
Sbjct: 293 TGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNM 352

Query: 70  CHPLTGGGMTVALSDIVVLQNLL 2
            HPLTGGGMTVALSDIVVL+NLL
Sbjct: 353 RHPLTGGGMTVALSDIVVLRNLL 375


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