BLASTX nr result

ID: Coptis24_contig00004343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004343
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330170.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-19
ref|XP_002330165.1| predicted protein [Populus trichocarpa] gi|2...    71   6e-17
ref|XP_002279349.1| PREDICTED: acetylajmalan esterase [Vitis vin...    62   4e-15
ref|XP_002528395.1| Alpha-L-fucosidase 2 precursor, putative [Ri...    62   1e-14
ref|XP_004159174.1| PREDICTED: acetylajmalan esterase-like [Cucu...    66   3e-14

>ref|XP_002330170.1| predicted protein [Populus trichocarpa] gi|222871626|gb|EEF08757.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score = 77.8 bits (190), Expect(2) = 9e-19
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = -2

Query: 161 ASEWVLTNAPQLGFETKSILKVCCGTGGDYNFSLMSMCGMEGVYACSDPDQYI 3
           A +W+LT AP LGF+ K++ K CCGTGGDY F+ + MCG  GV  C +PD+YI
Sbjct: 290 AFQWILTKAPNLGFDAKAVQKACCGTGGDYGFNALKMCGTPGVPVCPEPDRYI 342



 Score = 40.4 bits (93), Expect(2) = 9e-19
 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 11/62 (17%)
 Frame = -3

Query: 316 VVSDSRPIGCSPIYAL*KQ--------RFNCL---NTFARYHNQYLQNALQQLRLEYPNV 170
           VV  + PIGC PIY    Q        +F+CL   N  +  HN +L+ A+++L+ E PNV
Sbjct: 221 VVPGNVPIGCFPIYLTGFQTNNTDAYDKFHCLKGLNNLSASHNDHLKQAIEELKKENPNV 280

Query: 169 AI 164
            I
Sbjct: 281 LI 282


>ref|XP_002330165.1| predicted protein [Populus trichocarpa] gi|222871621|gb|EEF08752.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score = 70.9 bits (172), Expect(2) = 6e-17
 Identities = 30/49 (61%), Positives = 35/49 (71%)
 Frame = -2

Query: 149 VLTNAPQLGFETKSILKVCCGTGGDYNFSLMSMCGMEGVYACSDPDQYI 3
           +  NA  LGF+TKS+ K CCGTGGD+NFSLM MCG   +  C  PDQYI
Sbjct: 294 IYQNAQSLGFDTKSMQKACCGTGGDHNFSLMRMCGAPDIPVCPKPDQYI 342



 Score = 41.2 bits (95), Expect(2) = 6e-17
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
 Frame = -3

Query: 316 VVSDSRPIGCSPIY--------AL*KQRFNCL---NTFARYHNQYLQNALQQLRLEYPNV 170
           VV  + PIGC P+Y        A     F+CL   N+ A YHN+ L+  ++ L+  YP+V
Sbjct: 221 VVPGNFPIGCFPVYLSQFHPNDAAAYDEFHCLKGLNSLASYHNELLKQTVEGLKTNYPDV 280

Query: 169 AIL 161
            I+
Sbjct: 281 IIV 283


>ref|XP_002279349.1| PREDICTED: acetylajmalan esterase [Vitis vinifera]
           gi|296089708|emb|CBI39527.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 62.0 bits (149), Expect(2) = 4e-15
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = -2

Query: 161 ASEWVLTNAPQLGFETKSILKVCCGTGGDYNFSLMSMCGMEGVYACSDPDQYI 3
           A +W+  NA  LG +  S+LK CCG GG+YN+     CG  GV AC DPD+ +
Sbjct: 291 AFQWLFRNALFLGLDPASLLKACCGAGGEYNYDRARTCGAPGVQACPDPDRLV 343



 Score = 43.9 bits (102), Expect(2) = 4e-15
 Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
 Frame = -3

Query: 316 VVSDSRPIGCSPIY--------AL*KQRFNCL---NTFARYHNQYLQNALQQLRLEYPNV 170
           VV  + PIGC PIY              FNCL   N FA Y+N+ LQ A+++LR E P+ 
Sbjct: 222 VVPGNFPIGCLPIYLTVFKTNNTAAYDEFNCLKGFNDFAEYYNERLQQAIEELRNENPDT 281

Query: 169 AIL 161
            I+
Sbjct: 282 VIV 284


>ref|XP_002528395.1| Alpha-L-fucosidase 2 precursor, putative [Ricinus communis]
           gi|223532183|gb|EEF33988.1| Alpha-L-fucosidase 2
           precursor, putative [Ricinus communis]
          Length = 379

 Score = 62.4 bits (150), Expect(2) = 1e-14
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -2

Query: 161 ASEWVLTNAPQLGFETKSILKVCCGTGGDYNFSLMSMCGMEGVYACSDPDQYI 3
           A +WVL  A  LGF+ +S+ K CCG GGDY+FS   MCG+ GV  C  P + I
Sbjct: 289 AYKWVLLKAAWLGFDLQSLQKACCGIGGDYDFSFGRMCGVAGVAVCPKPQERI 341



 Score = 42.0 bits (97), Expect(2) = 1e-14
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
 Frame = -3

Query: 316 VVSDSRPIGCSPIY--------AL*KQRFNC---LNTFARYHNQYLQNALQQLRLEYPNV 170
           VV  + PIGC PIY        +      +C   LN+ + YHN+ LQ A+++L+ E+ N 
Sbjct: 219 VVPGNFPIGCLPIYLTGFHTNDSAAYDELHCLKGLNSLSVYHNEKLQQAIEELQQEHQNA 278

Query: 169 AILLLNGF 146
           A+LL   +
Sbjct: 279 AVLLYGDY 286


>ref|XP_004159174.1| PREDICTED: acetylajmalan esterase-like [Cucumis sativus]
          Length = 370

 Score = 66.2 bits (160), Expect(2) = 3e-14
 Identities = 26/50 (52%), Positives = 38/50 (76%)
 Frame = -2

Query: 152 WVLTNAPQLGFETKSILKVCCGTGGDYNFSLMSMCGMEGVYACSDPDQYI 3
           W++ +A  LGF+ +S+ K CCG GGDY F+LM MCG+ GV AC +P+++I
Sbjct: 290 WIIRHAFVLGFDEESLQKSCCGIGGDYKFNLMQMCGVAGVEACPNPNEHI 339



 Score = 36.6 bits (83), Expect(2) = 3e-14
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
 Frame = -3

Query: 316 VVSDSRPIGCSPIYAL*--------KQRFNCL---NTFARYHNQYLQNALQQLRLEYPNV 170
           VV  + PIGC PIY               +CL   N+FA YHN  ++ A++ L+ E P+ 
Sbjct: 218 VVPGNFPIGCFPIYLTGFHTNDTSAYDELHCLKDLNSFATYHNDQIKQAIEVLKKENPHA 277

Query: 169 AIL 161
            I+
Sbjct: 278 IIV 280


Top