BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004336
         (1533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274008.1| PREDICTED: mitochondrial ubiquitin ligase ac...   541   e-151
ref|XP_003536411.1| PREDICTED: mitochondrial ubiquitin ligase ac...   516   e-144
ref|XP_003518933.1| PREDICTED: mitochondrial ubiquitin ligase ac...   516   e-144
ref|XP_004136066.1| PREDICTED: mitochondrial ubiquitin ligase ac...   502   e-140
ref|XP_002887932.1| zinc finger family protein [Arabidopsis lyra...   502   e-139

>ref|XP_002274008.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1 [Vitis
            vinifera] gi|296086688|emb|CBI32323.3| unnamed protein
            product [Vitis vinifera]
          Length = 343

 Score =  541 bits (1393), Expect = e-151
 Identities = 259/343 (75%), Positives = 293/343 (85%), Gaps = 1/343 (0%)
 Frame = +3

Query: 369  MFPWGGITCCLSAAALYLLGRSSGKDADILKSVYRIGQLKDLAKILDTACKVLPLVVTVS 548
            M PWGGI+CCLSAAALYLLGRSSG+DA+ LKSV R+ QLKDL ++LDTACKVLPLVVTVS
Sbjct: 1    MIPWGGISCCLSAAALYLLGRSSGRDAEALKSVTRVQQLKDLVQLLDTACKVLPLVVTVS 60

Query: 549  GRVGSDAPIKCD-SGLRGVIVEETAEQHFLKHNDSGSWVEDSALMLAMSKEVPWYLDDGT 725
            GRVGSD PIKC+ SGLRGVIVEETAEQHFLKHND+GSW++DSALML+MSKEVPWYLDD T
Sbjct: 61   GRVGSDTPIKCEYSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDDT 120

Query: 726  GRVHVVGARGANGLVLAIGREIFEESGRSLVRGTLDYLQGLKMLGVKRVERVLPIGTSLT 905
            GR ++VGARGA GLVL +G E+FEESGRSLVRGTLDYLQGLKMLGVKR+ERVLP GT LT
Sbjct: 121  GRAYIVGARGATGLVLTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGTPLT 180

Query: 906  VVGEAVKDDIGTIRIQRPHKGPFYVSPKSIDQLIANLGIWSRFYKYASMGFTVVGVFLIA 1085
            VVGEA+KDD+GTIRIQRPHKGPFYVSPKSID L+ANLG W+R+Y+YAS+GFTV GV+LIA
Sbjct: 181  VVGEAIKDDVGTIRIQRPHKGPFYVSPKSIDHLVANLGKWARWYRYASLGFTVFGVYLIA 240

Query: 1086 KHTIRYIMEXXXXXXXXXXXXXXXXXXXXXDHDGSDEKADNGLESAKKERLMPDLCVICL 1265
            K  I+Y+ME                     D +  DEK +NG ++ K++RLMPDLCVICL
Sbjct: 241  KSAIQYVMERKRCWELRKRVLAAASKKSGQDSEDPDEKDENGSDNTKRDRLMPDLCVICL 300

Query: 1266 EHEYNAVFVPCGHMCCCMTCSSHLTSCPLCRRRIDQVVRTFRH 1394
            E EYNAVFVPCGHMCCC  CSS LT+CPLCRRRI+QVVRTFRH
Sbjct: 301  EQEYNAVFVPCGHMCCCTMCSSQLTNCPLCRRRIEQVVRTFRH 343


>ref|XP_003536411.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
            isoform 1 [Glycine max]
          Length = 339

 Score =  516 bits (1329), Expect = e-144
 Identities = 251/343 (73%), Positives = 290/343 (84%), Gaps = 1/343 (0%)
 Frame = +3

Query: 369  MFPWGGITCCLSAAALYLLGRSSGKDADILKSVYRIGQLKDLAKILDTACKVLPLVVTVS 548
            M PWGG++CCLSAAALYLLGRSSG+DA+ILKSV R+ QLK+LA++LD   ++LPL+VT+S
Sbjct: 1    MIPWGGLSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDA--EILPLIVTIS 58

Query: 549  GRVGSDAPIKCD-SGLRGVIVEETAEQHFLKHNDSGSWVEDSALMLAMSKEVPWYLDDGT 725
            GRV S+ PI C+ SGLRGVIVEETAEQHFLKHND+GSW++DSALML+MSKEVPWYLDDGT
Sbjct: 59   GRVSSETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT 118

Query: 726  GRVHVVGARGANGLVLAIGREIFEESGRSLVRGTLDYLQGLKMLGVKRVERVLPIGTSLT 905
             RVHVVGARGA+G  L +G E FEESGRSLVRGTLDYLQGLKMLGVKR+ERVLP+GTSLT
Sbjct: 119  DRVHVVGARGASGFALPVGIEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLT 178

Query: 906  VVGEAVKDDIGTIRIQRPHKGPFYVSPKSIDQLIANLGIWSRFYKYASMGFTVVGVFLIA 1085
            VVGEA KDD+G IRIQRPHKGPFYVSPK+IDQLIANLG W+R+YKYAS+G TV G +LIA
Sbjct: 179  VVGEAAKDDVGAIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASVGLTVFGAYLIA 238

Query: 1086 KHTIRYIMEXXXXXXXXXXXXXXXXXXXXXDHDGSDEKADNGLESAKKERLMPDLCVICL 1265
            KH IRYI+E                     ++D   EKAD+  + AKK+RLMPDLCVICL
Sbjct: 239  KHAIRYILERRRRSELQRRVLAAAAKKSGQNND--VEKADSLSDGAKKDRLMPDLCVICL 296

Query: 1266 EHEYNAVFVPCGHMCCCMTCSSHLTSCPLCRRRIDQVVRTFRH 1394
            E EYNAVFVPCGHMCCC  CSSHLT+CPLCRR+I++VV+TFRH
Sbjct: 297  EQEYNAVFVPCGHMCCCTACSSHLTNCPLCRRQIEKVVKTFRH 339


>ref|XP_003518933.1| PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1-like
            [Glycine max]
          Length = 339

 Score =  516 bits (1328), Expect = e-144
 Identities = 251/343 (73%), Positives = 287/343 (83%), Gaps = 1/343 (0%)
 Frame = +3

Query: 369  MFPWGGITCCLSAAALYLLGRSSGKDADILKSVYRIGQLKDLAKILDTACKVLPLVVTVS 548
            M PWGG++CCLSAAALYLLGRSSG+DA+ILKSV R+ QLK+LA++LD   ++LPL+VT+S
Sbjct: 1    MIPWGGLSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDA--EILPLIVTIS 58

Query: 549  GRVGSDAPIKCD-SGLRGVIVEETAEQHFLKHNDSGSWVEDSALMLAMSKEVPWYLDDGT 725
            GRV S+ PI C+ SGLRGVIVEETAEQHFLKHND+GSW++DSALML+MSKEVPWYLDDGT
Sbjct: 59   GRVSSETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT 118

Query: 726  GRVHVVGARGANGLVLAIGREIFEESGRSLVRGTLDYLQGLKMLGVKRVERVLPIGTSLT 905
             RVHVVGARGA G  L +G E FEESGRSLVRGTLDYLQGLKMLGVKR+ERVLP+GTSLT
Sbjct: 119  DRVHVVGARGAAGFALPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLT 178

Query: 906  VVGEAVKDDIGTIRIQRPHKGPFYVSPKSIDQLIANLGIWSRFYKYASMGFTVVGVFLIA 1085
            VVGEA KDD+G  RIQRPHKGPFYVSPK+IDQLIANLG W+R+YKYASMG TV G +LIA
Sbjct: 179  VVGEAAKDDVGAFRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIA 238

Query: 1086 KHTIRYIMEXXXXXXXXXXXXXXXXXXXXXDHDGSDEKADNGLESAKKERLMPDLCVICL 1265
            KH IRYI+E                     ++D   EKAD   +  KK+RLMPDLCVICL
Sbjct: 239  KHAIRYILERRRRSELQRRVLAAAAKKSGQNND--VEKADGLSDGVKKDRLMPDLCVICL 296

Query: 1266 EHEYNAVFVPCGHMCCCMTCSSHLTSCPLCRRRIDQVVRTFRH 1394
            E EYNAVFVPCGHMCCC TCSSHLT+CPLCRR+I++VV+TFRH
Sbjct: 297  EQEYNAVFVPCGHMCCCTTCSSHLTNCPLCRRQIEKVVKTFRH 339


>ref|XP_004136066.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
            [Cucumis sativus]
          Length = 342

 Score =  502 bits (1293), Expect = e-140
 Identities = 240/343 (69%), Positives = 283/343 (82%), Gaps = 1/343 (0%)
 Frame = +3

Query: 369  MFPWGGITCCLSAAALYLLGRSSGKDADILKSVYRIGQLKDLAKILDTACKVLPLVVTVS 548
            M PWGGI+CCLSAAALYLLGRSSG+DA++LKSV R+ QLK+LA++L+ A  +LPLVV +S
Sbjct: 1    MLPWGGISCCLSAAALYLLGRSSGRDAELLKSVTRVNQLKELAQLLE-AEHLLPLVVAIS 59

Query: 549  GRVGSDAPIKCD-SGLRGVIVEETAEQHFLKHNDSGSWVEDSALMLAMSKEVPWYLDDGT 725
            GRV SD PI C+ SGLRGVIVEETAEQHFLKHND+GSW++DSALML+MSKEVPWYLDDGT
Sbjct: 60   GRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT 119

Query: 726  GRVHVVGARGANGLVLAIGREIFEESGRSLVRGTLDYLQGLKMLGVKRVERVLPIGTSLT 905
            GR  V+GAR A   +L +  E+FEESGRSL+RGTLDYLQGLKMLGVKR+ERVLP GTSLT
Sbjct: 120  GRAFVLGARNATNFILPVVSEVFEESGRSLMRGTLDYLQGLKMLGVKRIERVLPTGTSLT 179

Query: 906  VVGEAVKDDIGTIRIQRPHKGPFYVSPKSIDQLIANLGIWSRFYKYASMGFTVVGVFLIA 1085
            VVGEA KDDIGTIRIQRPHKGPFYVSPK+IDQLI+NLG W+R+YKYASMG ++ G++L+ 
Sbjct: 180  VVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASMGLSIFGLYLVT 239

Query: 1086 KHTIRYIMEXXXXXXXXXXXXXXXXXXXXXDHDGSDEKADNGLESAKKERLMPDLCVICL 1265
            KH I Y+ME                     +++G  EKA NG +  K++R MPDLCVICL
Sbjct: 240  KHVILYLMERRRRWELQKRVLAAAAKRSSQENEGEIEKASNGTDGTKRDRSMPDLCVICL 299

Query: 1266 EHEYNAVFVPCGHMCCCMTCSSHLTSCPLCRRRIDQVVRTFRH 1394
            E +YNAVFVPCGHMCCC+ C SHLT+CPLCRRRI+ VV+TFRH
Sbjct: 300  ERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTFRH 342


>ref|XP_002887932.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333773|gb|EFH64191.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 343

 Score =  502 bits (1292), Expect = e-139
 Identities = 239/343 (69%), Positives = 280/343 (81%), Gaps = 1/343 (0%)
 Frame = +3

Query: 369  MFPWGGITCCLSAAALYLLGRSSGKDADILKSVYRIGQLKDLAKILDTACKVLPLVVTVS 548
            M PWGG+TCCLSAAALYLLGRSSG+DA++LK+V R+ QLK+LA++L+   K+LP +V VS
Sbjct: 1    MIPWGGVTCCLSAAALYLLGRSSGRDAEVLKTVTRVNQLKELAQLLELDSKILPFIVAVS 60

Query: 549  GRVGSDAPIKCD-SGLRGVIVEETAEQHFLKHNDSGSWVEDSALMLAMSKEVPWYLDDGT 725
            GRVGS+ PIKC+ SG+RGVIVEETAEQHFLKHN++GSWV+DSALML+MSKEVPW+LDDGT
Sbjct: 61   GRVGSETPIKCEHSGIRGVIVEETAEQHFLKHNETGSWVQDSALMLSMSKEVPWFLDDGT 120

Query: 726  GRVHVVGARGANGLVLAIGREIFEESGRSLVRGTLDYLQGLKMLGVKRVERVLPIGTSLT 905
             RVHV+GARGA G  L +G E+FEESGRSLVRGTLDYLQGLKMLGVKR+ERVLP G  LT
Sbjct: 121  SRVHVMGARGATGFALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGIPLT 180

Query: 906  VVGEAVKDDIGTIRIQRPHKGPFYVSPKSIDQLIANLGIWSRFYKYASMGFTVVGVFLIA 1085
            +VGEAVKDDIG  RIQ+P +GPFYVSPKS+DQLI+NLG WSR+YKYASMGFTV GVFLI 
Sbjct: 181  IVGEAVKDDIGEFRIQKPDRGPFYVSPKSLDQLISNLGKWSRWYKYASMGFTVFGVFLIT 240

Query: 1086 KHTIRYIMEXXXXXXXXXXXXXXXXXXXXXDHDGSDEKADNGLESAKKERLMPDLCVICL 1265
            KH I  ++E                     + +GS+   ++  +S KKE  +PDLCVICL
Sbjct: 241  KHVIDSVLERRRRRQLQKRVLDAAAKRAELESEGSNGARESIADSTKKEDAVPDLCVICL 300

Query: 1266 EHEYNAVFVPCGHMCCCMTCSSHLTSCPLCRRRIDQVVRTFRH 1394
            E EYNAVFVPCGHMCCC  CSSHLTSCPLCRRRID  V+T+RH
Sbjct: 301  EQEYNAVFVPCGHMCCCTACSSHLTSCPLCRRRIDLAVKTYRH 343