BLASTX nr result

ID: Coptis24_contig00004330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004330
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002330621.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002528852.1| serine-threonine protein kinase, plant-type,...   122   3e-26

>ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|222850887|gb|EEE88434.1|
            predicted protein [Populus trichocarpa]
          Length = 1025

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/124 (51%), Positives = 88/124 (70%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3    MGADASIQGDVYSYGILVLEMSTGRRPTDEMFKDGLSLHNYASNGLQDQLIKIVDPILLS 182
            +G++ S  GDVYSYGIL+LE+ TGRRPTD +FKDGL+LHN+A   L   + +++DP+L++
Sbjct: 899  LGSEVSPYGDVYSYGILLLEVFTGRRPTDGLFKDGLNLHNFAKTALPISVAEVLDPVLVT 958

Query: 183  DGDDTLGDAN--SLGIGNHRRTKLLECMTAIVKIGVACSVESPLERMDIREVSNELHAIR 356
            + ++T GDA+     IGNH     +EC+ AIVK+GVACS E P ERM+I  V+ EL  IR
Sbjct: 959  EAEETSGDASRRMSHIGNH-----MECLAAIVKVGVACSAEFPRERMEISSVAVELRRIR 1013

Query: 357  DTFL 368
               L
Sbjct: 1014 HILL 1017


>ref|XP_002330621.1| predicted protein [Populus trichocarpa] gi|222872225|gb|EEF09356.1|
           predicted protein [Populus trichocarpa]
          Length = 774

 Score =  125 bits (313), Expect = 5e-27
 Identities = 67/120 (55%), Positives = 86/120 (71%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   MGADASIQGDVYSYGILVLEMSTGRRPTDEMFKDGLSLHNYASNGLQDQLIKIVDPILLS 182
           +G+D S  GDVYS+GIL+LEM TG+RPT+ MFKDGL+LHNYA   L  ++ ++V+PILL 
Sbjct: 637 VGSDVSTYGDVYSFGILLLEMFTGKRPTEGMFKDGLNLHNYAEMALHGRVSEVVEPILLR 696

Query: 183 DGDDTLGDANSLGIGNHRRT-KLLECMTAIVKIGVACSVESPLERMDIREVSNELHAIRD 359
             +D     +S    NH  T K+LEC+ +I+KIGVACSVE P ERMD+  V  ELH IRD
Sbjct: 697 --EDVERSIHSSHRMNHIETGKILECLISIIKIGVACSVELPRERMDMSIVVAELHRIRD 754


>ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|222850886|gb|EEE88433.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/124 (50%), Positives = 88/124 (70%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3    MGADASIQGDVYSYGILVLEMSTGRRPTDEMFKDGLSLHNYASNGLQDQLIKIVDPILLS 182
            +G++ S  GDVYSYGIL+LE+ TGRRPT+ +FKDGL+LHN+A   L   + +++DP+L++
Sbjct: 897  LGSEVSPYGDVYSYGILLLEVFTGRRPTNGLFKDGLNLHNFAKTALPISVAEVLDPVLVT 956

Query: 183  DGDDTLGDAN--SLGIGNHRRTKLLECMTAIVKIGVACSVESPLERMDIREVSNELHAIR 356
            + ++T GDA+     IGNH     +EC+ AIVK+GVACS E P ERM+I  V+ EL  IR
Sbjct: 957  EAEETSGDASRRMSHIGNH-----MECLAAIVKVGVACSAEFPRERMEISSVAVELRRIR 1011

Query: 357  DTFL 368
               L
Sbjct: 1012 HILL 1015


>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
            predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/120 (50%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3    MGADASIQGDVYSYGILVLEMSTGRRPTDEMFKDGLSLHNYASNGLQDQLIKIVDPILLS 182
            MG++ S  GDVYSYGIL+LEM TG+RPTD MFKD ++LHN+A     +++ +I+DP L+ 
Sbjct: 899  MGSEVSTFGDVYSYGILLLEMFTGKRPTDTMFKDEMNLHNFAKMASPNRVTEILDPALVR 958

Query: 183  DGDDTLGD-ANSLGIGNHRRT-KLLECMTAIVKIGVACSVESPLERMDIREVSNELHAIR 356
            + ++T  D A++    NH  T K++EC+  I+K+GVAC+VESP ER+DI  V+ EL+ IR
Sbjct: 959  EAEETSADHASTSSARNHNGTEKIMECLVLIIKVGVACAVESPRERIDISNVATELYRIR 1018


>ref|XP_002528852.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223531703|gb|EEF33526.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 688

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/125 (49%), Positives = 89/125 (71%), Gaps = 3/125 (2%)
 Frame = +3

Query: 3   MGADASIQGDVYSYGILVLEMSTGRRPTDEMFKDGLSLHNYASNGLQDQLIKIVDPILLS 182
           +G++ S  GD++S+GIL+LEM TG+RPTDEMF +GLSLHN+ +  L +Q+IKI+DP +L 
Sbjct: 551 LGSNISTSGDIFSFGILLLEMFTGKRPTDEMFTEGLSLHNFVNRALPEQVIKIIDPNML- 609

Query: 183 DGDDTLGDANS---LGIGNHRRTKLLECMTAIVKIGVACSVESPLERMDIREVSNELHAI 353
            G     DA S     + N R+ KL+EC+T I +IG++CS ESP ERM I +V  +L ++
Sbjct: 610 -GMQLSEDATSNHHRNLMNRRKDKLMECLTPIFEIGLSCSTESPQERMKIGDVVAQLSSV 668

Query: 354 RDTFL 368
           R+ FL
Sbjct: 669 RNRFL 673