BLASTX nr result

ID: Coptis24_contig00004319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004319
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265965.1| PREDICTED: miraculin [Vitis vinifera] gi|297...   170   6e-40
ref|XP_003634323.1| PREDICTED: miraculin-like [Vitis vinifera]        157   4e-36
emb|CBI35464.3| unnamed protein product [Vitis vinifera]              154   3e-35
ref|XP_002266430.1| PREDICTED: miraculin [Vitis vinifera]             152   1e-34
emb|CAN75396.1| hypothetical protein VITISV_028636 [Vitis vinifera]   152   1e-34

>ref|XP_002265965.1| PREDICTED: miraculin [Vitis vinifera] gi|297742783|emb|CBI35463.3|
           unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  170 bits (430), Expect = 6e-40
 Identities = 94/182 (51%), Positives = 115/182 (63%), Gaps = 1/182 (0%)
 Frame = -1

Query: 920 MKTMSITLLTSVLFISSITLVPLPLPVDAATSTTVLDLDGQKVQANKKYYILPVVRXXXX 741
           MKT S+ L +  LF+ ++   PLP   +AA    VLD++G+++++   YYILPV+R    
Sbjct: 1   MKTSSLLLFS--LFLIALAFNPLPGAAEAAPDP-VLDIEGKQLRSGVDYYILPVIRGRGG 57

Query: 740 XXXXXL-RNKTCPFYVAQEILEVLKGLPLRFLPVNATDKFVQVSTDMNFVFSAATICVQS 564
                  RNKTCP  V Q+ LEV  GLPL F PVN     ++VSTD N  FSAATIC QS
Sbjct: 58  GLTVASVRNKTCPLDVVQDKLEVSHGLPLTFTPVNPKQDVIRVSTDHNIKFSAATICAQS 117

Query: 563 TAWRLGSIDEVSXXXXXXXXXXXGNPGRGTLSNWFKIESYMRDYKLVFCPSVCNFCKVMC 384
           T W+L   DE +           GNPGRGTLSNWFKIE Y  DYKLVFCP+VCNFCKV+C
Sbjct: 118 TVWKL-EYDESTGQRFITTGGVEGNPGRGTLSNWFKIEKYGDDYKLVFCPTVCNFCKVIC 176

Query: 383 GD 378
            D
Sbjct: 177 RD 178


>ref|XP_003634323.1| PREDICTED: miraculin-like [Vitis vinifera]
          Length = 216

 Score =  157 bits (397), Expect = 4e-36
 Identities = 92/191 (48%), Positives = 116/191 (60%), Gaps = 2/191 (1%)
 Frame = -1

Query: 944 TFSDPSVNMKTMSITLLTSVLFISSITLVPLPLPVDAATSTTVLDLDGQKVQANKKYYIL 765
           TF+     +KT+S  LL S+L I+ + L P P+  +AA    VLD++G+K+++    YIL
Sbjct: 5   TFAFRLTTIKTIS--LLLSLLLIA-LALKPFPVAAEAAPDP-VLDIEGKKLRSEVDCYIL 60

Query: 764 PVVRXXXXXXXXXLRN--KTCPFYVAQEILEVLKGLPLRFLPVNATDKFVQVSTDMNFVF 591
           PV+R              +TCP  V QE  EV  GLPL F+PVN     ++VSTD N  F
Sbjct: 61  PVIRRRGGGGLTLASTGKETCPLDVVQEQHEVSNGLPLMFIPVNPKKGVIRVSTDHNIEF 120

Query: 590 SAATICVQSTAWRLGSIDEVSXXXXXXXXXXXGNPGRGTLSNWFKIESYMRDYKLVFCPS 411
           SAATIC+QST W+L   DE S           GNPGRGTLSNWFKIE Y  D  LVFCP+
Sbjct: 121 SAATICIQSTVWKL-EYDESSGQQFVTTGGVEGNPGRGTLSNWFKIEKYEDDNNLVFCPT 179

Query: 410 VCNFCKVMCGD 378
           VC+FCK +CGD
Sbjct: 180 VCDFCKPVCGD 190


>emb|CBI35464.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  154 bits (390), Expect = 3e-35
 Identities = 92/188 (48%), Positives = 112/188 (59%), Gaps = 1/188 (0%)
 Frame = -1

Query: 938 SDPSVNMKTMSITLLTSVLFISSITLVPLPLPVDAATSTTVLDLDGQKVQANKKYYILPV 759
           S  S  MKT S  LL S+L I+ + + P  +  ++A    VLD +G+K+++   YYILPV
Sbjct: 17  SKRSTTMKTTS--LLFSLLLIA-LAVKPFSVAAESAPDP-VLDTEGKKLRSGVDYYILPV 72

Query: 758 VRXXXXXXXXXLR-NKTCPFYVAQEILEVLKGLPLRFLPVNATDKFVQVSTDMNFVFSAA 582
            R            N+TCP  V QE  EV  GLPL F PVN     ++VSTD N  FSA+
Sbjct: 73  FRGRGGGLTLASTGNETCPLDVVQEQQEVSNGLPLTFTPVNPKKGVIRVSTDHNIKFSAS 132

Query: 581 TICVQSTAWRLGSIDEVSXXXXXXXXXXXGNPGRGTLSNWFKIESYMRDYKLVFCPSVCN 402
           TICVQST W+L   DE S           GNPGR TL NWFKIE Y  DYKLVFCP+VC+
Sbjct: 133 TICVQSTLWKL-EYDESSGQRFVTTGGVEGNPGRETLDNWFKIEKYEDDYKLVFCPTVCD 191

Query: 401 FCKVMCGD 378
           FCK +CGD
Sbjct: 192 FCKPVCGD 199


>ref|XP_002266430.1| PREDICTED: miraculin [Vitis vinifera]
          Length = 203

 Score =  152 bits (385), Expect = 1e-34
 Identities = 90/182 (49%), Positives = 110/182 (60%), Gaps = 1/182 (0%)
 Frame = -1

Query: 920 MKTMSITLLTSVLFISSITLVPLPLPVDAATSTTVLDLDGQKVQANKKYYILPVVRXXXX 741
           MKT S  LL S+L I+ + + P  +  ++A    VLD +G+K+++   YYILPV R    
Sbjct: 1   MKTTS--LLFSLLLIA-LAVKPFSVAAESAPDP-VLDTEGKKLRSGVDYYILPVFRGRGG 56

Query: 740 XXXXXLR-NKTCPFYVAQEILEVLKGLPLRFLPVNATDKFVQVSTDMNFVFSAATICVQS 564
                   N+TCP  V QE  EV  GLPL F PVN     ++VSTD N  FSA+TICVQS
Sbjct: 57  GLTLASTGNETCPLDVVQEQQEVSNGLPLTFTPVNPKKGVIRVSTDHNIKFSASTICVQS 116

Query: 563 TAWRLGSIDEVSXXXXXXXXXXXGNPGRGTLSNWFKIESYMRDYKLVFCPSVCNFCKVMC 384
           T W+L   DE S           GNPGR TL NWFKIE Y  DYKLVFCP+VC+FCK +C
Sbjct: 117 TLWKL-EYDESSGQRFVTTGGVEGNPGRETLDNWFKIEKYEDDYKLVFCPTVCDFCKPVC 175

Query: 383 GD 378
           GD
Sbjct: 176 GD 177


>emb|CAN75396.1| hypothetical protein VITISV_028636 [Vitis vinifera]
          Length = 203

 Score =  152 bits (385), Expect = 1e-34
 Identities = 90/182 (49%), Positives = 110/182 (60%), Gaps = 1/182 (0%)
 Frame = -1

Query: 920 MKTMSITLLTSVLFISSITLVPLPLPVDAATSTTVLDLDGQKVQANKKYYILPVVRXXXX 741
           MKT S  LL S+L I+ + + P  +  ++A    VLD +G+K+++   YYILPV R    
Sbjct: 1   MKTTS--LLFSLLLIA-LAVKPFSVAAESAPDP-VLDTEGKKLRSGVDYYILPVFRGRGG 56

Query: 740 XXXXXLR-NKTCPFYVAQEILEVLKGLPLRFLPVNATDKFVQVSTDMNFVFSAATICVQS 564
                   N+TCP  V QE  EV  GLPL F PVN     ++VSTD N  FSA+TICVQS
Sbjct: 57  GLTLASTGNETCPLDVVQEQQEVSNGLPLTFTPVNPKKGVIRVSTDHNIKFSASTICVQS 116

Query: 563 TAWRLGSIDEVSXXXXXXXXXXXGNPGRGTLSNWFKIESYMRDYKLVFCPSVCNFCKVMC 384
           T W+L   DE S           GNPGR TL NWFKIE Y  DYKLVFCP+VC+FCK +C
Sbjct: 117 TLWKL-EYDESSGQRFVTTGGVEGNPGRETLDNWFKIEKYEDDYKLVFCPTVCDFCKPVC 175

Query: 383 GD 378
           GD
Sbjct: 176 GD 177


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