BLASTX nr result

ID: Coptis24_contig00004316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004316
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19209.3| unnamed protein product [Vitis vinifera]               58   4e-06

>emb|CBI19209.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 50/178 (28%), Positives = 71/178 (39%), Gaps = 15/178 (8%)
 Frame = -1

Query: 739 HGSVALHP---HRLS--------RSLKANKQGHFFANQGLLLF----RINHKRHIKHFMK 605
           +G + LH    HR S          L A    HF  NQ L  F    R+   R+ K  M 
Sbjct: 11  YGGIGLHARSCHRFSGLASIPRPTRLSAVSGRHFLGNQDLKAFSTVGRVPSDRNTK--MD 68

Query: 604 MEVKAANEIYQVALSGSNFPGWSNWIWGGLLALIISMIKNNWGPFQLLKKEVVSAIXXXX 425
             V  + +      SG     W NWI G LL++++ + K   GP   LK EV +A+    
Sbjct: 69  TTVYCSTQPGASLPSGPPTNSWKNWIIGMLLSMVVPLWKYKLGPLLQLKNEVETAMNTTE 128

Query: 424 XXXXXXXXXXXXXXXXXXEIADKHPGDVKLKDAIERIENLAKEAVKDAKTVEGGLHKV 251
                             +I +  P   KL+   + +EN+AKE  K A  V+  + KV
Sbjct: 129 QIAETIESVAEKVEQVADDIGNHLPEGGKLRQVADFVENVAKETAKGAHLVDAAIEKV 186


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