BLASTX nr result
ID: Coptis24_contig00004312
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004312 (2072 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271556.1| PREDICTED: G patch domain-containing protein... 327 e-101 emb|CBI15390.3| unnamed protein product [Vitis vinifera] 325 e-101 ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu... 320 5e-95 ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2... 308 4e-91 ref|XP_004138338.1| PREDICTED: G patch domain-containing protein... 294 4e-87 >ref|XP_002271556.1| PREDICTED: G patch domain-containing protein 1-like [Vitis vinifera] Length = 997 Score = 327 bits (839), Expect(2) = e-101 Identities = 189/366 (51%), Positives = 240/366 (65%), Gaps = 9/366 (2%) Frame = +2 Query: 251 KPFKADPAKQERFEQFLKEKYQGGLRSTESGGNSKMSESARARERLDFEAAAEAIEKGKQ 430 KPFK DPAKQERFE FLKEKY GGLRST+SGG S MSE+ARARE+LDFEAAAE IEKG + Sbjct: 533 KPFKEDPAKQERFELFLKEKYHGGLRSTDSGGASNMSEAARAREKLDFEAAAETIEKGLR 592 Query: 431 DASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPKRDEYQWRPSPLLC 610 + L QQ EMSA+A ++F GGLE+AKV++ EE + KMYPKR+E+QWRPSP+LC Sbjct: 593 GKESNL-STQQFMEMSATAVMEFAPGGLEQAKVTQAEELVIKKMYPKREEFQWRPSPILC 651 Query: 611 KRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQPETQVTA 790 KRFDI+DP+MGKPPP PR RS+MDSLVFTSD VK+T ++TV + + V+Q + Q + Sbjct: 652 KRFDIIDPFMGKPPPAPRRRSKMDSLVFTSDSVKSTTVDETVT---SKLPVAQLDPQQFS 708 Query: 791 DEVLNSETEIEINSTNVERPVDLYKAIFXXXXXXXXXXXXXNQMQDPEKKTEVANTTLNR 970 +V E E+ + VERPVDLYKAIF NQ+ DP++K E ANTTLNR Sbjct: 709 TDVNAREIEVNMEVEKVERPVDLYKAIFSDDSDDEVENSTSNQVDDPKRKIEAANTTLNR 768 Query: 971 LIAGDFLESLGKELGLEVPSEAPIVRDKV-SIASQKENNCTNTSNI-------PPQKNHI 1126 L+AGDFLESLGKELGLEVP + P +K + A +KE+N N NI P + Sbjct: 769 LMAGDFLESLGKELGLEVPPDMPQSINKARTSAPKKESNDVNPGNISSLAVENKPSSTYT 828 Query: 1127 AMEISDVPSKGKEAADGCSSLPKITQKGASNGNEQDHGNRQGEP-TATGHFVHIYEKAEA 1303 A++ + V +EA + + TQ+ S NE + G TG + K +A Sbjct: 829 AVKGTSV---NQEAPHDKAYDQESTQEVRSQNNELMLDSPSGSKIKVTGSSENESSKIKA 885 Query: 1304 QKLDSE 1321 +K+D E Sbjct: 886 EKMDQE 891 Score = 71.6 bits (174), Expect(2) = e-101 Identities = 33/44 (75%), Positives = 40/44 (90%) Frame = +3 Query: 3 SRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASL 134 SRG+ILGE+PLERS +D++ S+ASAD +Q QFNLSDTFTKPASL Sbjct: 482 SRGKILGERPLERSSRDTNSSVASADVIQLQFNLSDTFTKPASL 525 >emb|CBI15390.3| unnamed protein product [Vitis vinifera] Length = 944 Score = 325 bits (833), Expect(2) = e-101 Identities = 179/341 (52%), Positives = 230/341 (67%), Gaps = 8/341 (2%) Frame = +2 Query: 251 KPFKADPAKQERFEQFLKEKYQGGLRSTESGGNSKMSESARARERLDFEAAAEAIEKGKQ 430 KPFK DPAKQERFE FLKEKY GGLRST+SGG S MSE+ARARE+LDFEAAAE IEKG + Sbjct: 533 KPFKEDPAKQERFELFLKEKYHGGLRSTDSGGASNMSEAARAREKLDFEAAAETIEKGLR 592 Query: 431 DASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPKRDEYQWRPSPLLC 610 + L QQ EMSA+A ++F GGLE+AKV++ EE + KMYPKR+E+QWRPSP+LC Sbjct: 593 GKESNL-STQQFMEMSATAVMEFAPGGLEQAKVTQAEELVIKKMYPKREEFQWRPSPILC 651 Query: 611 KRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQPETQVTA 790 KRFDI+DP+MGKPPP PR RS+MDSLVFTSD VK+T ++TV + + V+Q + Q + Sbjct: 652 KRFDIIDPFMGKPPPAPRRRSKMDSLVFTSDSVKSTTVDETVT---SKLPVAQLDPQQFS 708 Query: 791 DEVLNSETEIEINSTNVERPVDLYKAIFXXXXXXXXXXXXXNQMQDPEKKTEVANTTLNR 970 +V E E+ + VERPVDLYKAIF NQ+ DP++K E ANTTLNR Sbjct: 709 TDVNAREIEVNMEVEKVERPVDLYKAIFSDDSDDEVENSTSNQVDDPKRKIEAANTTLNR 768 Query: 971 LIAGDFLESLGKELGLEVPSEAPIVRDKV-SIASQKENNCTNTSNI-------PPQKNHI 1126 L+AGDFLESLGKELGLEVP + P +K + A +KE+N N NI P + Sbjct: 769 LMAGDFLESLGKELGLEVPPDMPQSINKARTSAPKKESNDVNPGNISSLAVENKPSSTYT 828 Query: 1127 AMEISDVPSKGKEAADGCSSLPKITQKGASNGNEQDHGNRQ 1249 A++ + +G++A Q +S+ + +D +R+ Sbjct: 829 AVKAEKMDQEGRKAKTPTGH----RQNWSSDSSSEDERSRK 865 Score = 71.6 bits (174), Expect(2) = e-101 Identities = 33/44 (75%), Positives = 40/44 (90%) Frame = +3 Query: 3 SRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASL 134 SRG+ILGE+PLERS +D++ S+ASAD +Q QFNLSDTFTKPASL Sbjct: 482 SRGKILGERPLERSSRDTNSSVASADVIQLQFNLSDTFTKPASL 525 >ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis] gi|223549179|gb|EEF50668.1| RNA binding protein, putative [Ricinus communis] Length = 1000 Score = 320 bits (819), Expect(2) = 5e-95 Identities = 168/293 (57%), Positives = 207/293 (70%), Gaps = 3/293 (1%) Frame = +2 Query: 251 KPFKADPAKQERFEQFLKEKYQGGLRSTESGGNSKMSESARARERLDFEAAAEAIEKGKQ 430 KPFK DPAKQERFEQFLKEKY GGLRS +S G S MSE+ARARERLDFEAAAEAIEKGK Sbjct: 536 KPFKDDPAKQERFEQFLKEKYYGGLRSMDSVGASNMSEAARARERLDFEAAAEAIEKGKG 595 Query: 431 DASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPKRDEYQWRPSPLLC 610 + L Q +A S QFTSGGLE+ K + E+ + K+YPKR+E+QWRP P+LC Sbjct: 596 NKETKLSAQQFMA-FSTGGGTQFTSGGLEQVKDAHAEDLLMKKIYPKREEFQWRPLPILC 654 Query: 611 KRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQPETQVTA 790 KRFD++DPYMGKPPP PR RS++DSL+FTSD VK TK E+T A+ + + Q TQ + Sbjct: 655 KRFDLIDPYMGKPPPPPRMRSKLDSLIFTSDSVKPTKLEETTNANRDRISNLQSGTQKIS 714 Query: 791 DEVLNSETEIEINSTNVERPVDLYKAIFXXXXXXXXXXXXXNQMQDPEKKTEVANTTLNR 970 + +SE +E+ NVERPVDLYKAIF N+++DP+KK EVA+TTLNR Sbjct: 715 KDAADSEKVVEVQVENVERPVDLYKAIFSDDSDDEVEASTANKVEDPDKKVEVAHTTLNR 774 Query: 971 LIAGDFLESLGKELGLEVPSEAPIVRDKVSIASQKENNC---TNTSNIPPQKN 1120 LIAGDFLESLGKELGLEVP + P +K ++ K+++ T NI P +N Sbjct: 775 LIAGDFLESLGKELGLEVPPDMPYSTNKTGTSTSKKDSAIANTRDVNILPIEN 827 Score = 57.0 bits (136), Expect(2) = 5e-95 Identities = 29/43 (67%), Positives = 34/43 (79%) Frame = +3 Query: 3 SRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPAS 131 SR +LGEKPLERS K+++ S+ASAD QFNLSDTF KPAS Sbjct: 486 SRANLLGEKPLERSLKENTSSVASAD-FNLQFNLSDTFIKPAS 527 >ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1| predicted protein [Populus trichocarpa] Length = 965 Score = 308 bits (789), Expect(2) = 4e-91 Identities = 173/330 (52%), Positives = 217/330 (65%), Gaps = 3/330 (0%) Frame = +2 Query: 251 KPFKADPAKQERFEQFLKEKYQGGLRSTESGGNSKMSESARARERLDFEAAAEAIEKGKQ 430 KPF+ DP KQERFEQFLKEKYQGG+RST S G S MSE+ARARERLDFEAAAEAIEKGK Sbjct: 540 KPFQDDPGKQERFEQFLKEKYQGGIRSTASAGASNMSEAARARERLDFEAAAEAIEKGKL 599 Query: 431 DASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPKRDEYQWRPSPLLC 610 + N L +QQL AS +QFT GGL++ K + E+ K+YP+R+E+QWRPS +LC Sbjct: 600 NKENKL--SQQLMAFPASGGMQFTLGGLQQGKDTPDEDLATKKIYPRREEFQWRPSSVLC 657 Query: 611 KRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQPETQVTA 790 KRFD++DP MGKPPP PR RS+MDSL+ TSD +KA K E+ A N Q Q + Sbjct: 658 KRFDLIDPSMGKPPPPPRMRSKMDSLIVTSD-LKAMKMEEAFSADRNQPLALQFSPQEVS 716 Query: 791 DEVLNSETEIEINSTNVERPVDLYKAIFXXXXXXXXXXXXXNQMQDPEKKTEVANTTLNR 970 +V++ ETE E+ NVERPVDLYKAIF N +DPEKK EVA++TLNR Sbjct: 717 KDVVDRETEPEVQVENVERPVDLYKAIFSDDSDDEMEASNFNAKEDPEKKIEVAHSTLNR 776 Query: 971 LIAGDFLESLGKELGLEVPSEAPIVRDKVSIASQKENNCTN--TSNIPP-QKNHIAMEIS 1141 L+AGDFLESLG+ELGLEVP P + + QKE+ N NIP ++ ++ I+ Sbjct: 777 LMAGDFLESLGRELGLEVPPNPPYSTNIARSSHQKESAIANAGNDNIPSVEEKSFSIPIA 836 Query: 1142 DVPSKGKEAADGCSSLPKITQKGASNGNEQ 1231 S+ + A+ K +KG S +EQ Sbjct: 837 HGVSQEERVAND----EKTAKKGESRKDEQ 862 Score = 55.5 bits (132), Expect(2) = 4e-91 Identities = 30/43 (69%), Positives = 33/43 (76%) Frame = +3 Query: 3 SRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPAS 131 SRG+ILGE PLERS +D S SIAS + V FNLSDTFTKP S Sbjct: 490 SRGKILGEMPLERSSRDLSSSIASVN-VNLPFNLSDTFTKPES 531 >ref|XP_004138338.1| PREDICTED: G patch domain-containing protein 1-like [Cucumis sativus] Length = 1001 Score = 294 bits (753), Expect(2) = 4e-87 Identities = 172/360 (47%), Positives = 226/360 (62%), Gaps = 1/360 (0%) Frame = +2 Query: 248 VKPFKADPAKQERFEQFLKEKYQGGLRSTESGGNSKMSESARARERLDFEAAAEAIEKGK 427 VKPFK D AKQERFEQFLKEKYQGGLR+ G MSE+ARARERLDFEAAAEAIEKGK Sbjct: 537 VKPFKDDSAKQERFEQFLKEKYQGGLRTGAPVGAINMSEAARARERLDFEAAAEAIEKGK 596 Query: 428 QDASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPKRDEYQWRPSPLL 607 + + A+ +QFTSGG+EE K +K+E + KM PKR+EYQWRP+P+L Sbjct: 597 -GLKETKLSAEHFVDFLATGGMQFTSGGVEEVKDTKLEGLMMEKMIPKREEYQWRPAPIL 655 Query: 608 CKRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQPETQ-V 784 CKRFD++DPYMGKPPP PR RS++D+L+FTS+ VK+TK E+++ ++ +S S E + + Sbjct: 656 CKRFDLIDPYMGKPPPAPRMRSKLDTLIFTSNSVKSTKVEESLTSTPSSFPQSNAEEKDM 715 Query: 785 TADEVLNSETEIEINSTNVERPVDLYKAIFXXXXXXXXXXXXXNQMQDPEKKTEVANTTL 964 A E +N + E+E V+RPVDLYKAIF Q +D +KK EVANTTL Sbjct: 716 DASENVNEKVEVEC----VDRPVDLYKAIFSDESEDEESTSTLKQTEDSKKKVEVANTTL 771 Query: 965 NRLIAGDFLESLGKELGLEVPSEAPIVRDKVSIASQKENNCTNTSNIPPQKNHIAMEISD 1144 NRLIAGDFLESLGKELGLEVP + P + + A Q E NI N +++E Sbjct: 772 NRLIAGDFLESLGKELGLEVPPDLPPSKKGQTTAPQNEAVPVGEQNI----NILSVEDKP 827 Query: 1145 VPSKGKEAADGCSSLPKITQKGASNGNEQDHGNRQGEPTATGHFVHIYEKAEAQKLDSEV 1324 P+ ++ G S ++T + N + N +A G + E + ++K +V Sbjct: 828 YPT---PSSTGILSDHRMTGTAGHDLNSRKEDNELIHNSA-GSGGKVMESSSSKKTSGKV 883 Score = 56.2 bits (134), Expect(2) = 4e-87 Identities = 29/43 (67%), Positives = 33/43 (76%) Frame = +3 Query: 3 SRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPAS 131 SRG+ILGEKPL RS K+ +P AS D V Q+NLSDTFTKP S Sbjct: 488 SRGKILGEKPLARSAKELNPPAAS-DGVHVQYNLSDTFTKPTS 529