BLASTX nr result
ID: Coptis24_contig00004308
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004308
(1833 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77670.1| hypothetical protein VITISV_024978 [Vitis vinifera] 581 e-163
ref|XP_002275503.1| PREDICTED: F-box protein At5g39450-like [Vit... 550 e-154
ref|XP_002309932.1| predicted protein [Populus trichocarpa] gi|2... 537 e-150
ref|XP_002516329.1| conserved hypothetical protein [Ricinus comm... 533 e-149
ref|XP_002309931.1| predicted protein [Populus trichocarpa] gi|2... 518 e-144
>emb|CAN77670.1| hypothetical protein VITISV_024978 [Vitis vinifera]
Length = 641
Score = 581 bits (1497), Expect = e-163
Identities = 293/462 (63%), Positives = 357/462 (77%), Gaps = 1/462 (0%)
Frame = -2
Query: 1385 HQNPELGNVVYVLPGFVSVVGCRIIPQELGPLGIEDGPILWAPVFEIIGDTDGSMAFFLH 1206
HQNPELGNVVYV+PGFVSVVGCRIIPQELGPLGIE+GPILWAPVFEIIGD DGS AFFLH
Sbjct: 95 HQNPELGNVVYVMPGFVSVVGCRIIPQELGPLGIEEGPILWAPVFEIIGDFDGSTAFFLH 154
Query: 1205 GRERDCDHLYPGSLKAIDKNCNVLLLEVEPKQINCGGTLLHSKSLVHCNSDRELSKRICK 1026
GRER+ DH YPGS+K I+KNCNVLLLEVEP++ GG L+H++S + +SD+E +++C+
Sbjct: 155 GRERENDHFYPGSVKGIEKNCNVLLLEVEPREQTSGGKLVHARSFID-HSDKE-QRKVCR 212
Query: 1025 SDRGSSGSQRVLEKNS-IVPFCNLGFGDRRKLLELVADHVRLRAPNLANGLLFPPLRDDD 849
SD G S SQR++E++ +VPF L FGDRR+LLE+V + VRL P+ A G LFP R+D+
Sbjct: 213 SDSGLSRSQRLVEQSGPMVPFSRLAFGDRRRLLEIVTNQVRLTEPSSAKGPLFPHSRNDE 272
Query: 848 ESFRNDIMLMSKRRSLLMKIYKFGEGCTNLLEAHRLPSNPTQMELNKIKKMLDHPSSFCG 669
E+FR D+ML+ +RRS+LM+ YK G G +L A LPS+PT +E+++I+K LDH S+F G
Sbjct: 273 ENFRKDMMLLFERRSILMQKYKLGGGNIDLKAAPELPSDPTLLEVSEIRKSLDHSSAFRG 332
Query: 668 SVNRDVGQICSPKKRTVASYFKDRLKLILGRSTSVNGSRDGSRNGTSSTSSENKHSQFQE 489
SV+ D G K++T+ YF+D K ILG+S S+NGSR S+NG+SS SENKH Q +
Sbjct: 333 SVSGDDGCTQVAKRKTIGGYFRDGFKQILGKSGSMNGSRPSSKNGSSS--SENKHVQLHD 390
Query: 488 FLRPADSIGMTLCAKYVKLLTYRAWPNMHDNHFALYKLPTPRPITGQEYAGLWGGTFGWX 309
FL+ D+IG+TL A VKL +YRAWPNMHD+ FALYKLP GQEYAGLWGGTFGW
Sbjct: 391 FLKSGDTIGLTLHASNVKLSSYRAWPNMHDSRFALYKLPMRVSTAGQEYAGLWGGTFGWP 450
Query: 308 XXXXXXXXXXKALFFLSLSYEESEGQKLLIATKILEGTHYVLHPNGSAMFLVKVDELSSD 129
KALFFL LSYEE + Q+ LIATKILEGTHYVLHPNGSAMF+VK++E S D
Sbjct: 451 PGRPSEDKPGKALFFLLLSYEEIDEQRHLIATKILEGTHYVLHPNGSAMFIVKINEPSJD 510
Query: 128 PFPWNNDGASRSVDVKRAYSGEGIANGYGFRYPGSKPGSLYV 3
PFPW D S V VK A+ G+GIANGYGFRYPGSKPGSLYV
Sbjct: 511 PFPWETDADSLPVAVKHAFVGDGIANGYGFRYPGSKPGSLYV 552
>ref|XP_002275503.1| PREDICTED: F-box protein At5g39450-like [Vitis vinifera]
Length = 601
Score = 550 bits (1418), Expect = e-154
Identities = 284/462 (61%), Positives = 338/462 (73%), Gaps = 1/462 (0%)
Frame = -2
Query: 1385 HQNPELGNVVYVLPGFVSVVGCRIIPQELGPLGIEDGPILWAPVFEIIGDTDGSMAFFLH 1206
HQNPELGNVVYV+PGFVSVVGCRIIPQELGPLGIE+GPILWAPVFEIIGD DGS AFFLH
Sbjct: 95 HQNPELGNVVYVMPGFVSVVGCRIIPQELGPLGIEEGPILWAPVFEIIGDFDGSTAFFLH 154
Query: 1205 GRERDCDHLYPGSLKAIDKNCNVLLLEVEPKQINCGGTLLHSKSLVHCNSDRELSKRICK 1026
GRER+ DH YPGS+K I+KNCNVLLLEVEP++ G
Sbjct: 155 GRERENDHFYPGSVKGIEKNCNVLLLEVEPREQTSG------------------------ 190
Query: 1025 SDRGSSGSQRVLEKNS-IVPFCNLGFGDRRKLLELVADHVRLRAPNLANGLLFPPLRDDD 849
D G S SQR++E++ +VPF L FGDRR+LLE+V + VRL P+ A G LFP R+D+
Sbjct: 191 -DSGLSRSQRLVEQSGPMVPFSRLAFGDRRRLLEIVTNQVRLTEPSSAKGPLFPHSRNDE 249
Query: 848 ESFRNDIMLMSKRRSLLMKIYKFGEGCTNLLEAHRLPSNPTQMELNKIKKMLDHPSSFCG 669
E+FR D+ML+ +RRS+LM+ YK G G +L A LPS+PT +E+++I+K LDH S+F G
Sbjct: 250 ENFRKDMMLLFERRSILMQKYKLGGGNIDLKAAPELPSDPTLLEVSEIRKSLDHSSAFRG 309
Query: 668 SVNRDVGQICSPKKRTVASYFKDRLKLILGRSTSVNGSRDGSRNGTSSTSSENKHSQFQE 489
SV+ D G K++T+ YF+D K ILG+S S+NGSR S+NG+SS SENKH Q +
Sbjct: 310 SVSGDDGCTQVAKRKTIGGYFRDGFKQILGKSGSMNGSRPSSKNGSSS--SENKHVQLHD 367
Query: 488 FLRPADSIGMTLCAKYVKLLTYRAWPNMHDNHFALYKLPTPRPITGQEYAGLWGGTFGWX 309
FL+ D+IG+TL A VKL +YRAWPNMHD+ FALYKLP GQEYAGLWGGTFGW
Sbjct: 368 FLKSGDTIGLTLHASNVKLSSYRAWPNMHDSRFALYKLPMRVSTAGQEYAGLWGGTFGWP 427
Query: 308 XXXXXXXXXXKALFFLSLSYEESEGQKLLIATKILEGTHYVLHPNGSAMFLVKVDELSSD 129
KALFFL LSYEE + Q+ LIATKILEGTHYVLHPNGSAMF+VK++E S D
Sbjct: 428 PGRPSEDKPGKALFFLLLSYEEIDEQRHLIATKILEGTHYVLHPNGSAMFIVKINEPSID 487
Query: 128 PFPWNNDGASRSVDVKRAYSGEGIANGYGFRYPGSKPGSLYV 3
PFPW D S V VK A+ G+GIANGYGFRYPGSKPGSLYV
Sbjct: 488 PFPWETDADSLPVAVKHAFVGDGIANGYGFRYPGSKPGSLYV 529
>ref|XP_002309932.1| predicted protein [Populus trichocarpa] gi|222852835|gb|EEE90382.1|
predicted protein [Populus trichocarpa]
Length = 614
Score = 537 bits (1383), Expect = e-150
Identities = 275/462 (59%), Positives = 347/462 (75%), Gaps = 1/462 (0%)
Frame = -2
Query: 1385 HQNPELGNVVYVLPGFVSVVGCRIIPQELGPLGIEDGPILWAPVFEIIGDTDGSMAFFLH 1206
HQNPELGNVVYV+PGFVSVVGCRI+PQELGPLGIE+GPILWAPVFEIIGD DGS +FFLH
Sbjct: 94 HQNPELGNVVYVMPGFVSVVGCRILPQELGPLGIEEGPILWAPVFEIIGDLDGSTSFFLH 153
Query: 1205 GRERDCDHLYPGSLKAIDKNCNVLLLEVEPKQINCGGTLLHSKSLVHCNSDRELSKRICK 1026
G E+ DH+YPGS+K++ + CNVLLLEVEP+Q G L +KS + NSD+EL++++ +
Sbjct: 154 GGEKGNDHVYPGSVKSVGRKCNVLLLEVEPRQQK--GKLFPNKSFAY-NSDKELARKLSR 210
Query: 1025 SDRGSSGSQR-VLEKNSIVPFCNLGFGDRRKLLELVADHVRLRAPNLANGLLFPPLRDDD 849
S G S SQR +++ + VPF L F DRRKL+E+V V + P+L N LLFP LR+D+
Sbjct: 211 SHNGLSWSQRLIIQCEAKVPFSRLSFSDRRKLIEVVTSQVGQKVPDLENRLLFPRLRNDE 270
Query: 848 ESFRNDIMLMSKRRSLLMKIYKFGEGCTNLLEAHRLPSNPTQMELNKIKKMLDHPSSFCG 669
E+F+ DI L+ +RRS L+KI K G+G N EA +PS+PTQ++ ++I+K LD S G
Sbjct: 271 ENFQKDIALLFERRSFLLKICKLGQGF-NWKEAPEVPSDPTQLQWSEIRKSLDRSS---G 326
Query: 668 SVNRDVGQICSPKKRTVASYFKDRLKLILGRSTSVNGSRDGSRNGTSSTSSENKHSQFQE 489
S+N D Q+ S K+T+ Y + ++ ILG+S SVNGS S++ SS+S E+KH+Q E
Sbjct: 327 SLNEDDNQMQSNTKKTLGGYLRAYIRHILGKSPSVNGSHAHSKH--SSSSRESKHAQLHE 384
Query: 488 FLRPADSIGMTLCAKYVKLLTYRAWPNMHDNHFALYKLPTPRPITGQEYAGLWGGTFGWX 309
FLR D+IG+TL A ++L +YRAWPN+HDN FALYKLP P QEYAGLWGGTFGW
Sbjct: 385 FLRSGDTIGLTLHASKMRLSSYRAWPNIHDNQFALYKLPMRVPRADQEYAGLWGGTFGWP 444
Query: 308 XXXXXXXXXXKALFFLSLSYEESEGQKLLIATKILEGTHYVLHPNGSAMFLVKVDELSSD 129
KALFFL ++YEESEGQ+ LIATKILEGTHYVLHPNGSAMF+V +DE S D
Sbjct: 445 PGKPTEDKPGKALFFLLITYEESEGQRNLIATKILEGTHYVLHPNGSAMFVVNIDEPSQD 504
Query: 128 PFPWNNDGASRSVDVKRAYSGEGIANGYGFRYPGSKPGSLYV 3
PFPW+ D S + +K A++GEGIANGYGFRYPGSKPGSL+V
Sbjct: 505 PFPWDVDANSFPLTIKHAFAGEGIANGYGFRYPGSKPGSLFV 546
>ref|XP_002516329.1| conserved hypothetical protein [Ricinus communis]
gi|223544559|gb|EEF46076.1| conserved hypothetical
protein [Ricinus communis]
Length = 636
Score = 533 bits (1374), Expect = e-149
Identities = 275/462 (59%), Positives = 344/462 (74%), Gaps = 1/462 (0%)
Frame = -2
Query: 1385 HQNPELGNVVYVLPGFVSVVGCRIIPQELGPLGIEDGPILWAPVFEIIGDTDGSMAFFLH 1206
HQNPELGNVVYVLPGFVSVVGCRIIPQELGPLGIEDGPILWAPVFEI+GD DGS+ F LH
Sbjct: 94 HQNPELGNVVYVLPGFVSVVGCRIIPQELGPLGIEDGPILWAPVFEILGDHDGSVLFLLH 153
Query: 1205 GRERDCDHLYPGSLKAIDKNCNVLLLEVEPKQINCGGTLLHSKSLVHCNSDRELSKRICK 1026
GRE+ D++YPGS+K +++NCN+LLLEVE Q G LLHSKSL + NSD+E S++I +
Sbjct: 154 GREKGNDYIYPGSVKGVEENCNILLLEVEAGQQKSGKLLLHSKSLAY-NSDKEQSRKISR 212
Query: 1025 SDRGSSGSQRVLEK-NSIVPFCNLGFGDRRKLLELVADHVRLRAPNLANGLLFPPLRDDD 849
S+ G S SQ +L + +S VPF L F DRRKL+E+V H+ P+ ANG LFP DD+
Sbjct: 213 SNIGLSRSQSMLGQCDSKVPFSRLAFSDRRKLIEVVTGHIHQSVPDSANGPLFPGFCDDN 272
Query: 848 ESFRNDIMLMSKRRSLLMKIYKFGEGCTNLLEAHRLPSNPTQMELNKIKKMLDHPSSFCG 669
S + DI L+ +RR+LL+++Y G+ + EA LPS+ T+++L++ K+ LDH S +
Sbjct: 273 NS-QKDISLLFERRTLLLQMYNLGQSHFDWKEAPELPSDSTKLQLSETKRSLDHSSGYYS 331
Query: 668 SVNRDVGQICSPKKRTVASYFKDRLKLILGRSTSVNGSRDGSRNGTSSTSSENKHSQFQE 489
S+N D + K+T++ YF+ LK ILG+S S+NGSR S+N S+SSENKH+Q +E
Sbjct: 332 SLNGD-SEAKVIMKKTLSGYFRSSLKQILGKSPSINGSRIISKN---SSSSENKHAQLRE 387
Query: 488 FLRPADSIGMTLCAKYVKLLTYRAWPNMHDNHFALYKLPTPRPITGQEYAGLWGGTFGWX 309
FLR +D+IG+TL A +L +YRAWPNMHD+ FALYKLP P QE+AGLWGGTFGW
Sbjct: 388 FLRSSDTIGLTLHASTTRLSSYRAWPNMHDSRFALYKLPLRVPRADQEFAGLWGGTFGWP 447
Query: 308 XXXXXXXXXXKALFFLSLSYEESEGQKLLIATKILEGTHYVLHPNGSAMFLVKVDELSSD 129
KALFFL +SYEES GQ+ LIATKILEGTHYVLHPNGSAMF+V +DE S D
Sbjct: 448 PGKPTEDKPGKALFFLLISYEESGGQRQLIATKILEGTHYVLHPNGSAMFIVNIDEPSQD 507
Query: 128 PFPWNNDGASRSVDVKRAYSGEGIANGYGFRYPGSKPGSLYV 3
FPW+ D S V V +A+ GEGIANGYGFRYPGSKPGSL++
Sbjct: 508 LFPWDVDANSNPVSVTQAFIGEGIANGYGFRYPGSKPGSLFI 549
>ref|XP_002309931.1| predicted protein [Populus trichocarpa] gi|222852834|gb|EEE90381.1|
predicted protein [Populus trichocarpa]
Length = 597
Score = 518 bits (1334), Expect = e-144
Identities = 266/462 (57%), Positives = 336/462 (72%), Gaps = 1/462 (0%)
Frame = -2
Query: 1385 HQNPELGNVVYVLPGFVSVVGCRIIPQELGPLGIEDGPILWAPVFEIIGDTDGSMAFFLH 1206
HQNPELGNVVYV+PGFVSVVGCRI+PQELGPLGIE+GPILWAPVFEIIGD DGS +FFLH
Sbjct: 94 HQNPELGNVVYVMPGFVSVVGCRILPQELGPLGIEEGPILWAPVFEIIGDLDGSTSFFLH 153
Query: 1205 GRERDCDHLYPGSLKAIDKNCNVLLLEVEPKQINCGGTLLHSKSLVHCNSDRELSKRICK 1026
G E+ DH+YPGS+K++ + CNVLLLEVEP+Q + ++++ +
Sbjct: 154 GGEKGNDHVYPGSVKSVGRKCNVLLLEVEPRQ--------------------QKARKLSR 193
Query: 1025 SDRGSSGSQR-VLEKNSIVPFCNLGFGDRRKLLELVADHVRLRAPNLANGLLFPPLRDDD 849
S G S SQR +++ + VPF L F DRRKL+E+V V + P+L N LLFP LR+D+
Sbjct: 194 SHNGLSWSQRLIIQCEAKVPFSRLSFSDRRKLIEVVTSQVGQKVPDLENRLLFPRLRNDE 253
Query: 848 ESFRNDIMLMSKRRSLLMKIYKFGEGCTNLLEAHRLPSNPTQMELNKIKKMLDHPSSFCG 669
E+F+ DI L+ +RRS L+KI K G+G N EA +PS+PTQ++ ++I+K LD S G
Sbjct: 254 ENFQKDIALLFERRSFLLKICKLGQGF-NWKEAPEVPSDPTQLQWSEIRKSLDRSS---G 309
Query: 668 SVNRDVGQICSPKKRTVASYFKDRLKLILGRSTSVNGSRDGSRNGTSSTSSENKHSQFQE 489
S+N D Q+ S K+T+ Y + ++ ILG+S SVNGS S++ SS+S E+KH+Q E
Sbjct: 310 SLNEDDNQMQSNTKKTLGGYLRAYIRHILGKSPSVNGSHAHSKH--SSSSRESKHAQLHE 367
Query: 488 FLRPADSIGMTLCAKYVKLLTYRAWPNMHDNHFALYKLPTPRPITGQEYAGLWGGTFGWX 309
FLR D+IG+TL A ++L +YRAWPN+HDN FALYKLP P QEYAGLWGGTFGW
Sbjct: 368 FLRSGDTIGLTLHASKMRLSSYRAWPNIHDNQFALYKLPMRVPRADQEYAGLWGGTFGWP 427
Query: 308 XXXXXXXXXXKALFFLSLSYEESEGQKLLIATKILEGTHYVLHPNGSAMFLVKVDELSSD 129
KALFFL ++YEESEGQ+ LIATKILEGTHYVLHPNGSAMF+V +DE S D
Sbjct: 428 PGKPTEDKPGKALFFLLITYEESEGQRNLIATKILEGTHYVLHPNGSAMFVVNIDEPSQD 487
Query: 128 PFPWNNDGASRSVDVKRAYSGEGIANGYGFRYPGSKPGSLYV 3
PFPW+ D S + +K A++GEGIANGYGFRYPGSKPGSL+V
Sbjct: 488 PFPWDVDANSFPLTIKHAFAGEGIANGYGFRYPGSKPGSLFV 529