BLASTX nr result

ID: Coptis24_contig00004304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004304
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266955.1| PREDICTED: uncharacterized protein LOC100252...   134   8e-29
ref|XP_002321314.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-27
emb|CBI39526.3| unnamed protein product [Vitis vinifera]              125   3e-26
ref|XP_002279364.1| PREDICTED: uncharacterized protein LOC100247...   125   3e-26
emb|CAN73618.1| hypothetical protein VITISV_004114 [Vitis vinifera]   125   3e-26

>ref|XP_002266955.1| PREDICTED: uncharacterized protein LOC100252094 [Vitis vinifera]
            gi|297743851|emb|CBI36821.3| unnamed protein product
            [Vitis vinifera]
          Length = 268

 Score =  134 bits (336), Expect = 8e-29
 Identities = 59/79 (74%), Positives = 69/79 (87%)
 Frame = -1

Query: 1282 SKPTEEGSEPLKYQTWVLKVSIHCEGCKRKVKKVLTSVEGVYNVAIDSQQHKVTVTGNVD 1103
            + P ++  +PLKYQTWVLKVSIHCEGCK+KVKKVL S++GVY   IDSQQHKVTVTGNVD
Sbjct: 3    TSPAQDPPQPLKYQTWVLKVSIHCEGCKKKVKKVLHSIDGVYTTVIDSQQHKVTVTGNVD 62

Query: 1102 GDALVKKLVKTGKHAELWP 1046
             + L+KKLVKTGKHA+LWP
Sbjct: 63   AETLIKKLVKTGKHADLWP 81


>ref|XP_002321314.1| predicted protein [Populus trichocarpa] gi|222862087|gb|EEE99629.1|
            predicted protein [Populus trichocarpa]
          Length = 292

 Score =  128 bits (321), Expect = 4e-27
 Identities = 57/79 (72%), Positives = 67/79 (84%)
 Frame = -1

Query: 1282 SKPTEEGSEPLKYQTWVLKVSIHCEGCKRKVKKVLTSVEGVYNVAIDSQQHKVTVTGNVD 1103
            +KP EE  E LKYQTWVLKVSIHCEGCK+KVKKVL S++GVY   +DS QHKVTVTGNVD
Sbjct: 3    TKPAEEALEQLKYQTWVLKVSIHCEGCKKKVKKVLQSIDGVYKTEVDSHQHKVTVTGNVD 62

Query: 1102 GDALVKKLVKTGKHAELWP 1046
               L+KKL+++GK+AELWP
Sbjct: 63   AQILIKKLMRSGKYAELWP 81


>emb|CBI39526.3| unnamed protein product [Vitis vinifera]
          Length = 129

 Score =  125 bits (314), Expect = 3e-26
 Identities = 61/116 (52%), Positives = 75/116 (64%)
 Frame = -1

Query: 1303 MASTPTPSKPTEEGSEPLKYQTWVLKVSIHCEGCKRKVKKVLTSVEGVYNVAIDSQQHKV 1124
            MA+     +  EE  EPLKY+TWVLKVSIHCEGCK+KVKK+L +++GVY   ID++Q KV
Sbjct: 1    MATQGEAKEVVEEALEPLKYKTWVLKVSIHCEGCKKKVKKILQNIDGVYTTEIDTRQQKV 60

Query: 1123 TVTGNVDGDALVKKLVKTGKHAELWPXXXXXXXXXXXXXXXXTNDSKSNEESRVED 956
             VTGNVD + L+KKLVK GKHAELWP                  D +SNE+    D
Sbjct: 61   CVTGNVDVETLLKKLVKNGKHAELWPEKADHQKEKKSKNKEKQKDQESNEQEGGHD 116


>ref|XP_002279364.1| PREDICTED: uncharacterized protein LOC100247751 [Vitis vinifera]
          Length = 350

 Score =  125 bits (314), Expect = 3e-26
 Identities = 61/116 (52%), Positives = 75/116 (64%)
 Frame = -1

Query: 1303 MASTPTPSKPTEEGSEPLKYQTWVLKVSIHCEGCKRKVKKVLTSVEGVYNVAIDSQQHKV 1124
            MA+     +  EE  EPLKY+TWVLKVSIHCEGCK+KVKK+L +++GVY   ID++Q KV
Sbjct: 1    MATQGEAKEVVEEALEPLKYKTWVLKVSIHCEGCKKKVKKILQNIDGVYTTEIDTRQQKV 60

Query: 1123 TVTGNVDGDALVKKLVKTGKHAELWPXXXXXXXXXXXXXXXXTNDSKSNEESRVED 956
             VTGNVD + L+KKLVK GKHAELWP                  D +SNE+    D
Sbjct: 61   CVTGNVDVETLLKKLVKNGKHAELWPEKADHQKEKKSKNKEKQKDQESNEQEGGHD 116


>emb|CAN73618.1| hypothetical protein VITISV_004114 [Vitis vinifera]
          Length = 350

 Score =  125 bits (313), Expect = 3e-26
 Identities = 60/111 (54%), Positives = 74/111 (66%)
 Frame = -1

Query: 1303 MASTPTPSKPTEEGSEPLKYQTWVLKVSIHCEGCKRKVKKVLTSVEGVYNVAIDSQQHKV 1124
            MA+     +  EE  EPLKY+TWVLKVSIHCEGCK+KVKK+L +++GVY   ID++Q KV
Sbjct: 1    MATQGEAKEVVEEALEPLKYKTWVLKVSIHCEGCKKKVKKILQNIDGVYTTEIDTRQQKV 60

Query: 1123 TVTGNVDGDALVKKLVKTGKHAELWPXXXXXXXXXXXXXXXXTNDSKSNEE 971
             VTGNVD + L+KKLVK GKHAELWP                  D +SNE+
Sbjct: 61   CVTGNVDVETLLKKLVKNGKHAELWPEKADHQKEKKSKNKEKQKDQESNEQ 111


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