BLASTX nr result

ID: Coptis24_contig00004299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004299
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268589.2| PREDICTED: putative disease resistance prote...    66   3e-09
ref|XP_003632840.1| PREDICTED: putative disease resistance prote...    63   2e-08
ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
emb|CAN71670.1| hypothetical protein VITISV_006248 [Vitis vinifera]    63   2e-08
emb|CAN66085.1| hypothetical protein VITISV_018645 [Vitis vinifera]    63   3e-08

>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/99 (40%), Positives = 57/99 (57%)
 Frame = +1

Query: 1   VVSDGSSKGSVIGELGNLNFLKGSLSIKGLSHVKSVNEAKQAELQKKNYISDLRLNFGHD 180
           +VS   +    IG+L NLN L+G LSI+GL  VK   EA++AEL+ K Y+  L L FG +
Sbjct: 679 IVSSHGNDECQIGDLRNLNNLRGRLSIQGLDEVKDAGEAEKAELKNKVYLQRLELKFGGE 738

Query: 181 DGRDIGHVSSEEEIRRMEGVLENLEPHKESLERLEIWNY 297
           +G               +GV E L+PH  +L+ L+I+NY
Sbjct: 739 EG--------------TKGVAEALQPH-PNLKSLDIFNY 762


>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/99 (40%), Positives = 57/99 (57%)
 Frame = +1

Query: 1   VVSDGSSKGSVIGELGNLNFLKGSLSIKGLSHVKSVNEAKQAELQKKNYISDLRLNFGHD 180
           V S G+ +G  IG+L NLN L+G LSI+GL  VK   EA++AEL+ K ++ DL L F  +
Sbjct: 663 VSSHGNDEGQ-IGDLRNLNNLRGDLSIQGLDEVKDAGEAEKAELKNKVHLQDLTLGFDRE 721

Query: 181 DGRDIGHVSSEEEIRRMEGVLENLEPHKESLERLEIWNY 297
           +G               +GV E L+PH  +L+ L I+ Y
Sbjct: 722 EG--------------TKGVAEALQPH-PNLKALHIYYY 745


>ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|222834470|gb|EEE72947.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/98 (38%), Positives = 56/98 (57%)
 Frame = +1

Query: 13  GSSKGSVIGELGNLNFLKGSLSIKGLSHVKSVNEAKQAELQKKNYISDLRLNFGHDDGRD 192
           G+  G  IGEL  LN++ G LSIK L +V+ + +A+ A L +K  +  L L++  DD   
Sbjct: 45  GTEAGHHIGELQRLNYIGGELSIKDLGNVQGLTDAQNANLMRKTNLQSLSLSWREDDSSK 104

Query: 193 IGHVSSEEEIRRMEGVLENLEPHKESLERLEIWNYVGS 306
           I   +SE+       VL  LEPH  ++++LEI  Y GS
Sbjct: 105 ISEANSED-------VLCALEPH-SNMKKLEISGYRGS 134


>emb|CAN71670.1| hypothetical protein VITISV_006248 [Vitis vinifera]
          Length = 920

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/99 (40%), Positives = 57/99 (57%)
 Frame = +1

Query: 1   VVSDGSSKGSVIGELGNLNFLKGSLSIKGLSHVKSVNEAKQAELQKKNYISDLRLNFGHD 180
           V S G+ +G  IG+L NLN L+G LSI+GL  VK   EA++AEL+ K ++ DL L F  +
Sbjct: 680 VSSHGNDEGQ-IGDLRNLNNLRGDLSIQGLDEVKDAGEAEKAELKNKVHLQDLTLGFDRE 738

Query: 181 DGRDIGHVSSEEEIRRMEGVLENLEPHKESLERLEIWNY 297
           +G               +GV E L+PH  +L+ L I+ Y
Sbjct: 739 EG--------------TKGVAEALQPH-PNLKALHIYYY 762


>emb|CAN66085.1| hypothetical protein VITISV_018645 [Vitis vinifera]
          Length = 856

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/99 (40%), Positives = 57/99 (57%)
 Frame = +1

Query: 1   VVSDGSSKGSVIGELGNLNFLKGSLSIKGLSHVKSVNEAKQAELQKKNYISDLRLNFGHD 180
           V S G+ +G  IG+L NLN L+G LSI+GL  VK   EA++AEL+ K ++ DL L F  +
Sbjct: 616 VSSHGNDEGQ-IGDLRNLNNLRGDLSIQGLDEVKDAXEAEKAELKNKVHLQDLTLGFDRE 674

Query: 181 DGRDIGHVSSEEEIRRMEGVLENLEPHKESLERLEIWNY 297
           +G               +GV E L+PH  +L+ L I+ Y
Sbjct: 675 EG--------------TKGVAEALQPH-PNLKALHIYYY 698


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