BLASTX nr result
ID: Coptis24_contig00004295
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004295 (1036 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK22790.1| unknown [Picea sitchensis] gi|148907769|gb|ABR170... 227 4e-57 gb|ACN40559.1| unknown [Picea sitchensis] gi|224286397|gb|ACN409... 226 9e-57 gb|ABR17260.1| unknown [Picea sitchensis] 225 2e-56 emb|CBI38929.3| unnamed protein product [Vitis vinifera] 222 1e-55 ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like is... 222 1e-55 >gb|ABK22790.1| unknown [Picea sitchensis] gi|148907769|gb|ABR17010.1| unknown [Picea sitchensis] gi|148909746|gb|ABR17964.1| unknown [Picea sitchensis] gi|148909851|gb|ABR18012.1| unknown [Picea sitchensis] Length = 141 Score = 227 bits (578), Expect = 4e-57 Identities = 107/124 (86%), Positives = 120/124 (96%) Frame = +3 Query: 147 LGEPMDIMTALQLVLKKSLAHDGLARGIHEGAKVIEKHAAQLCVIAEDCSQPDYVKLVRA 326 LGEPMDI+TALQLVLKKSLAHDGLARG+HEGAK IEKHAAQLCV+AEDC+QPDY KLV+A Sbjct: 18 LGEPMDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAEDCNQPDYTKLVQA 77 Query: 327 LCADNNVSLIAVPSAKTLGEWAGLCKIDSEGKARKVVGCSIVVVKDYGEESEGLNIVQEY 506 LCA++NV+LI+VPSAK LGEWAGLCKIDSEGKARKVVGCS VVVKDYGEE+EGLN++QEY Sbjct: 78 LCAEHNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEETEGLNVIQEY 137 Query: 507 VKSH 518 VK+H Sbjct: 138 VKTH 141 >gb|ACN40559.1| unknown [Picea sitchensis] gi|224286397|gb|ACN40906.1| unknown [Picea sitchensis] Length = 141 Score = 226 bits (575), Expect = 9e-57 Identities = 106/124 (85%), Positives = 120/124 (96%) Frame = +3 Query: 147 LGEPMDIMTALQLVLKKSLAHDGLARGIHEGAKVIEKHAAQLCVIAEDCSQPDYVKLVRA 326 LGEPMDI+TALQLVLKKSLAHDGLARG+HEGAK IEKHAAQLCV+AEDC+QPDY KLV+A Sbjct: 18 LGEPMDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAEDCNQPDYTKLVQA 77 Query: 327 LCADNNVSLIAVPSAKTLGEWAGLCKIDSEGKARKVVGCSIVVVKDYGEESEGLNIVQEY 506 LCA++NV+LI+VPSAK LGEWAGLCKIDSEGKARKVVGCS +VVKDYGEE+EGLN++QEY Sbjct: 78 LCAEHNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCLVVKDYGEETEGLNVIQEY 137 Query: 507 VKSH 518 VK+H Sbjct: 138 VKTH 141 >gb|ABR17260.1| unknown [Picea sitchensis] Length = 141 Score = 225 bits (573), Expect = 2e-56 Identities = 106/124 (85%), Positives = 119/124 (95%) Frame = +3 Query: 147 LGEPMDIMTALQLVLKKSLAHDGLARGIHEGAKVIEKHAAQLCVIAEDCSQPDYVKLVRA 326 LGEPMDI+TALQLVLKKSLAHDGLARG+HEGAK IEKHAAQLCV+AEDC+QPDY KLV+A Sbjct: 18 LGEPMDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAEDCNQPDYTKLVQA 77 Query: 327 LCADNNVSLIAVPSAKTLGEWAGLCKIDSEGKARKVVGCSIVVVKDYGEESEGLNIVQEY 506 LCA++NV+LI+VPSAK LGEWAGLCKIDSEGKARKVVGCS VVKDYGEE+EGLN++QEY Sbjct: 78 LCAEHNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCFVVKDYGEETEGLNVIQEY 137 Query: 507 VKSH 518 VK+H Sbjct: 138 VKTH 141 >emb|CBI38929.3| unnamed protein product [Vitis vinifera] Length = 228 Score = 222 bits (566), Expect = 1e-55 Identities = 106/124 (85%), Positives = 118/124 (95%) Frame = +3 Query: 147 LGEPMDIMTALQLVLKKSLAHDGLARGIHEGAKVIEKHAAQLCVIAEDCSQPDYVKLVRA 326 LGEPMD+MTALQLVL+KSLAH GLARG+HEGAKVIEKHAA LCV+AEDC+QPDYVKLV+A Sbjct: 105 LGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCNQPDYVKLVKA 164 Query: 327 LCADNNVSLIAVPSAKTLGEWAGLCKIDSEGKARKVVGCSIVVVKDYGEESEGLNIVQEY 506 LCAD+NVSLI VPSAKTLGEWAGLCKIDSEGKARKVVGCS VVVKD+GEE+E +N+VQ+ Sbjct: 165 LCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEETEAMNVVQQQ 224 Query: 507 VKSH 518 VKSH Sbjct: 225 VKSH 228 >ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like isoform 2 [Vitis vinifera] gi|225465504|ref|XP_002272051.1| PREDICTED: 40S ribosomal protein S12-like isoform 1 [Vitis vinifera] Length = 142 Score = 222 bits (566), Expect = 1e-55 Identities = 106/124 (85%), Positives = 118/124 (95%) Frame = +3 Query: 147 LGEPMDIMTALQLVLKKSLAHDGLARGIHEGAKVIEKHAAQLCVIAEDCSQPDYVKLVRA 326 LGEPMD+MTALQLVL+KSLAH GLARG+HEGAKVIEKHAA LCV+AEDC+QPDYVKLV+A Sbjct: 19 LGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCNQPDYVKLVKA 78 Query: 327 LCADNNVSLIAVPSAKTLGEWAGLCKIDSEGKARKVVGCSIVVVKDYGEESEGLNIVQEY 506 LCAD+NVSLI VPSAKTLGEWAGLCKIDSEGKARKVVGCS VVVKD+GEE+E +N+VQ+ Sbjct: 79 LCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEETEAMNVVQQQ 138 Query: 507 VKSH 518 VKSH Sbjct: 139 VKSH 142