BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004288
         (1016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like...   289   7e-76
ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|2...   286   6e-75
ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ric...   281   2e-73
gb|AFK35756.1| unknown [Lotus japonicus]                              280   4e-73
ref|NP_001241927.1| uncharacterized protein LOC100794637 [Glycin...   274   3e-71

>ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like [Vitis vinifera]
           gi|297743767|emb|CBI36650.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  289 bits (740), Expect = 7e-76
 Identities = 142/246 (57%), Positives = 167/246 (67%)
 Frame = +1

Query: 61  MTVXXXXXXXXXXXXPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPIK 240
           MTV            PS S+FVSVISKKPF                       RAFLP+K
Sbjct: 1   MTVTAGIGYALIALGPSFSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGVWRAFLPLK 60

Query: 241 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 420
           TT+WWP+AI+II+S+ FQE LR+LFWKVYKRLEDILD FADRVSKPRLFLTDKMQI    
Sbjct: 61  TTAWWPYAILIITSIAFQEGLRILFWKVYKRLEDILDAFADRVSKPRLFLTDKMQIALAG 120

Query: 421 XXXXXXXXXIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 600
                    +FFCLSLLTPAFG ATF+VD+CS++PFFL+SA+++L FVTIHTFSMVIAFN
Sbjct: 121 GLGHGGAHAVFFCLSLLTPAFGRATFFVDRCSRIPFFLISALIALAFVTIHTFSMVIAFN 180

Query: 601 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXXHCAKTAWTKLT 780
           GYA+G K DQ+FVPV+H+VA MVTL+N A GGC IG             HC K  W +LT
Sbjct: 181 GYAEGNKVDQLFVPVVHMVAGMVTLINLASGGCVIGIPLLYFLAVLTMMHCGKMVWRRLT 240

Query: 781 EDRGRQ 798
           E + R+
Sbjct: 241 ETQSRE 246


>ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|222852716|gb|EEE90263.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  286 bits (732), Expect = 6e-75
 Identities = 143/243 (58%), Positives = 164/243 (67%)
 Frame = +1

Query: 61  MTVXXXXXXXXXXXXPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPIK 240
           MTV            PSLS+F+SVISKKPF                       RAFLP+K
Sbjct: 1   MTVAAGIGYALLALGPSLSLFISVISKKPFLILTVLSSTLLWLMSLIVLAGVWRAFLPLK 60

Query: 241 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 420
           +T+WWPFAI+I++SV FQE LR+LFWKVYKRLEDILD FADR++KPRLFLTDKM I    
Sbjct: 61  STTWWPFAILILTSVSFQEGLRILFWKVYKRLEDILDAFADRLAKPRLFLTDKMLIALAG 120

Query: 421 XXXXXXXXXIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 600
                    +FFCLSLLTPAFGPATF+VDKCSQ+PFFLVSAI++L FVTIHT SMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDKCSQLPFFLVSAIIALAFVTIHTCSMVIAFN 180

Query: 601 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXXHCAKTAWTKLT 780
           GYA+G K DQ FVP +HLVA MVTLVNFA GGC +G             HC K  W +L+
Sbjct: 181 GYAEGNKVDQYFVPAVHLVAGMVTLVNFASGGCVVGIPLLYFMAILTLLHCGKMVWRRLS 240

Query: 781 EDR 789
           E R
Sbjct: 241 ETR 243


>ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ricinus communis]
           gi|223525827|gb|EEF28266.1| gamma-secretase subunit
           aph-1, putative [Ricinus communis]
          Length = 249

 Score =  281 bits (719), Expect = 2e-73
 Identities = 140/246 (56%), Positives = 163/246 (66%)
 Frame = +1

Query: 61  MTVXXXXXXXXXXXXPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPIK 240
           MTV            PSLS+FVSVISKKPF                       R FLP+K
Sbjct: 1   MTVAAGIGYALLALGPSLSLFVSVISKKPFLILTLLSSTLLWLISLIVLSGVWRVFLPLK 60

Query: 241 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 420
           T +WWP+A++I++SV FQE LRLLFWK+YKRLEDILD FAD++SKPRLFLTDKM I    
Sbjct: 61  TKTWWPYALLIVTSVCFQEGLRLLFWKIYKRLEDILDDFADKLSKPRLFLTDKMLIAMAG 120

Query: 421 XXXXXXXXXIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 600
                    +FFCLSLLTPAFGPATF++D CSQ+PFFLVSAI++L FVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFLDSCSQIPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 601 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXXHCAKTAWTKLT 780
           GYA+G K DQIFVPV+HLVA +VTL N A GGC +G              C K  W +LT
Sbjct: 181 GYAEGNKVDQIFVPVVHLVAGLVTLPNLASGGCVVGIPLLYFIAILTLLQCGKMVWRRLT 240

Query: 781 EDRGRQ 798
           E+R  Q
Sbjct: 241 ENRSTQ 246


>gb|AFK35756.1| unknown [Lotus japonicus]
          Length = 249

 Score =  280 bits (716), Expect = 4e-73
 Identities = 135/242 (55%), Positives = 160/242 (66%)
 Frame = +1

Query: 61  MTVXXXXXXXXXXXXPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPIK 240
           MTV            PSLSIF+SVISKKPF                       R FLP+ 
Sbjct: 1   MTVSAGIGYALVALGPSLSIFISVISKKPFLILTVLSSTLLWLISLIVLSGIWRGFLPLS 60

Query: 241 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 420
           TT+WWP+AI+I+SS+ FQE LRL FWK+YKRLEDILD FADRVSKP LFLTDKM I    
Sbjct: 61  TTAWWPYAILILSSIAFQEGLRLFFWKIYKRLEDILDAFADRVSKPHLFLTDKMLIALAG 120

Query: 421 XXXXXXXXXIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 600
                    +FFC+SLLTPAFGPAT++VD+CSQ+PFFL+SA++ L FVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSQVPFFLLSALIGLAFVTIHTFSMVIAFN 180

Query: 601 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXXHCAKTAWTKLT 780
           GYA+G K DQ FVP++H VA  VT+VN APGGC +G             HC + AW +LT
Sbjct: 181 GYAEGNKVDQYFVPIVHFVAGAVTMVNLAPGGCTVGIPLLYFVTFLTLIHCGRMAWRRLT 240

Query: 781 ED 786
           E+
Sbjct: 241 EN 242


>ref|NP_001241927.1| uncharacterized protein LOC100794637 [Glycine max]
           gi|255642888|gb|ACU22669.1| unknown [Glycine max]
          Length = 249

 Score =  274 bits (700), Expect = 3e-71
 Identities = 134/242 (55%), Positives = 159/242 (65%)
 Frame = +1

Query: 61  MTVXXXXXXXXXXXXPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPIK 240
           MTV            PSLSIFVSVISKKPF                       R  LP+ 
Sbjct: 1   MTVAAGMGYALLALGPSLSIFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLN 60

Query: 241 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 420
           TT+WWPF I+I SSV FQE+LRL  WK+YKRL+D+LD FADR+SKP L LTDKM I    
Sbjct: 61  TTAWWPFGILIFSSVAFQEALRLFSWKIYKRLQDMLDAFADRISKPHLHLTDKMLIALAG 120

Query: 421 XXXXXXXXXIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 600
                    +FFC+SLLTPAFGPAT++VD+CS++PFFL+SAI++L FVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSKVPFFLLSAIIALAFVTIHTFSMVIAFN 180

Query: 601 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXXHCAKTAWTKLT 780
           GY++G K DQ FVP++H+VA MVTLVN APGGCA+G             HC +  W KLT
Sbjct: 181 GYSEGNKVDQYFVPIVHVVAGMVTLVNLAPGGCAVGIPLLYLVAILTLIHCGRMVWRKLT 240

Query: 781 ED 786
           ED
Sbjct: 241 ED 242