BLASTX nr result
ID: Coptis24_contig00004288
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004288 (1016 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like... 289 7e-76 ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|2... 286 6e-75 ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ric... 281 2e-73 gb|AFK35756.1| unknown [Lotus japonicus] 280 4e-73 ref|NP_001241927.1| uncharacterized protein LOC100794637 [Glycin... 274 3e-71 >ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like [Vitis vinifera] gi|297743767|emb|CBI36650.3| unnamed protein product [Vitis vinifera] Length = 249 Score = 289 bits (740), Expect = 7e-76 Identities = 142/246 (57%), Positives = 167/246 (67%) Frame = +1 Query: 61 MTVXXXXXXXXXXXXPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPIK 240 MTV PS S+FVSVISKKPF RAFLP+K Sbjct: 1 MTVTAGIGYALIALGPSFSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGVWRAFLPLK 60 Query: 241 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 420 TT+WWP+AI+II+S+ FQE LR+LFWKVYKRLEDILD FADRVSKPRLFLTDKMQI Sbjct: 61 TTAWWPYAILIITSIAFQEGLRILFWKVYKRLEDILDAFADRVSKPRLFLTDKMQIALAG 120 Query: 421 XXXXXXXXXIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 600 +FFCLSLLTPAFG ATF+VD+CS++PFFL+SA+++L FVTIHTFSMVIAFN Sbjct: 121 GLGHGGAHAVFFCLSLLTPAFGRATFFVDRCSRIPFFLISALIALAFVTIHTFSMVIAFN 180 Query: 601 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXXHCAKTAWTKLT 780 GYA+G K DQ+FVPV+H+VA MVTL+N A GGC IG HC K W +LT Sbjct: 181 GYAEGNKVDQLFVPVVHMVAGMVTLINLASGGCVIGIPLLYFLAVLTMMHCGKMVWRRLT 240 Query: 781 EDRGRQ 798 E + R+ Sbjct: 241 ETQSRE 246 >ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|222852716|gb|EEE90263.1| predicted protein [Populus trichocarpa] Length = 244 Score = 286 bits (732), Expect = 6e-75 Identities = 143/243 (58%), Positives = 164/243 (67%) Frame = +1 Query: 61 MTVXXXXXXXXXXXXPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPIK 240 MTV PSLS+F+SVISKKPF RAFLP+K Sbjct: 1 MTVAAGIGYALLALGPSLSLFISVISKKPFLILTVLSSTLLWLMSLIVLAGVWRAFLPLK 60 Query: 241 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 420 +T+WWPFAI+I++SV FQE LR+LFWKVYKRLEDILD FADR++KPRLFLTDKM I Sbjct: 61 STTWWPFAILILTSVSFQEGLRILFWKVYKRLEDILDAFADRLAKPRLFLTDKMLIALAG 120 Query: 421 XXXXXXXXXIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 600 +FFCLSLLTPAFGPATF+VDKCSQ+PFFLVSAI++L FVTIHT SMVIAFN Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDKCSQLPFFLVSAIIALAFVTIHTCSMVIAFN 180 Query: 601 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXXHCAKTAWTKLT 780 GYA+G K DQ FVP +HLVA MVTLVNFA GGC +G HC K W +L+ Sbjct: 181 GYAEGNKVDQYFVPAVHLVAGMVTLVNFASGGCVVGIPLLYFMAILTLLHCGKMVWRRLS 240 Query: 781 EDR 789 E R Sbjct: 241 ETR 243 >ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ricinus communis] gi|223525827|gb|EEF28266.1| gamma-secretase subunit aph-1, putative [Ricinus communis] Length = 249 Score = 281 bits (719), Expect = 2e-73 Identities = 140/246 (56%), Positives = 163/246 (66%) Frame = +1 Query: 61 MTVXXXXXXXXXXXXPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPIK 240 MTV PSLS+FVSVISKKPF R FLP+K Sbjct: 1 MTVAAGIGYALLALGPSLSLFVSVISKKPFLILTLLSSTLLWLISLIVLSGVWRVFLPLK 60 Query: 241 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 420 T +WWP+A++I++SV FQE LRLLFWK+YKRLEDILD FAD++SKPRLFLTDKM I Sbjct: 61 TKTWWPYALLIVTSVCFQEGLRLLFWKIYKRLEDILDDFADKLSKPRLFLTDKMLIAMAG 120 Query: 421 XXXXXXXXXIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 600 +FFCLSLLTPAFGPATF++D CSQ+PFFLVSAI++L FVTIHTFSMVIAFN Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFLDSCSQIPFFLVSAIIALAFVTIHTFSMVIAFN 180 Query: 601 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXXHCAKTAWTKLT 780 GYA+G K DQIFVPV+HLVA +VTL N A GGC +G C K W +LT Sbjct: 181 GYAEGNKVDQIFVPVVHLVAGLVTLPNLASGGCVVGIPLLYFIAILTLLQCGKMVWRRLT 240 Query: 781 EDRGRQ 798 E+R Q Sbjct: 241 ENRSTQ 246 >gb|AFK35756.1| unknown [Lotus japonicus] Length = 249 Score = 280 bits (716), Expect = 4e-73 Identities = 135/242 (55%), Positives = 160/242 (66%) Frame = +1 Query: 61 MTVXXXXXXXXXXXXPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPIK 240 MTV PSLSIF+SVISKKPF R FLP+ Sbjct: 1 MTVSAGIGYALVALGPSLSIFISVISKKPFLILTVLSSTLLWLISLIVLSGIWRGFLPLS 60 Query: 241 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 420 TT+WWP+AI+I+SS+ FQE LRL FWK+YKRLEDILD FADRVSKP LFLTDKM I Sbjct: 61 TTAWWPYAILILSSIAFQEGLRLFFWKIYKRLEDILDAFADRVSKPHLFLTDKMLIALAG 120 Query: 421 XXXXXXXXXIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 600 +FFC+SLLTPAFGPAT++VD+CSQ+PFFL+SA++ L FVTIHTFSMVIAFN Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSQVPFFLLSALIGLAFVTIHTFSMVIAFN 180 Query: 601 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXXHCAKTAWTKLT 780 GYA+G K DQ FVP++H VA VT+VN APGGC +G HC + AW +LT Sbjct: 181 GYAEGNKVDQYFVPIVHFVAGAVTMVNLAPGGCTVGIPLLYFVTFLTLIHCGRMAWRRLT 240 Query: 781 ED 786 E+ Sbjct: 241 EN 242 >ref|NP_001241927.1| uncharacterized protein LOC100794637 [Glycine max] gi|255642888|gb|ACU22669.1| unknown [Glycine max] Length = 249 Score = 274 bits (700), Expect = 3e-71 Identities = 134/242 (55%), Positives = 159/242 (65%) Frame = +1 Query: 61 MTVXXXXXXXXXXXXPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPIK 240 MTV PSLSIFVSVISKKPF R LP+ Sbjct: 1 MTVAAGMGYALLALGPSLSIFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLN 60 Query: 241 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 420 TT+WWPF I+I SSV FQE+LRL WK+YKRL+D+LD FADR+SKP L LTDKM I Sbjct: 61 TTAWWPFGILIFSSVAFQEALRLFSWKIYKRLQDMLDAFADRISKPHLHLTDKMLIALAG 120 Query: 421 XXXXXXXXXIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 600 +FFC+SLLTPAFGPAT++VD+CS++PFFL+SAI++L FVTIHTFSMVIAFN Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSKVPFFLLSAIIALAFVTIHTFSMVIAFN 180 Query: 601 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXXHCAKTAWTKLT 780 GY++G K DQ FVP++H+VA MVTLVN APGGCA+G HC + W KLT Sbjct: 181 GYSEGNKVDQYFVPIVHVVAGMVTLVNLAPGGCAVGIPLLYLVAILTLIHCGRMVWRKLT 240 Query: 781 ED 786 ED Sbjct: 241 ED 242