BLASTX nr result

ID: Coptis24_contig00004280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004280
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635067.1| PREDICTED: uncharacterized protein LOC100246...   321   1e-85
ref|XP_002317257.1| predicted protein [Populus trichocarpa] gi|2...   302   9e-80
ref|XP_002305621.1| predicted protein [Populus trichocarpa] gi|2...   274   3e-71
ref|XP_004134741.1| PREDICTED: cell number regulator 5-like [Cuc...   263   4e-68
ref|NP_001242047.1| uncharacterized protein LOC100806189 [Glycin...   263   4e-68

>ref|XP_003635067.1| PREDICTED: uncharacterized protein LOC100246768 isoform 1 [Vitis
           vinifera] gi|297745662|emb|CBI40873.3| unnamed protein
           product [Vitis vinifera]
          Length = 249

 Score =  321 bits (823), Expect = 1e-85
 Identities = 152/226 (67%), Positives = 176/226 (77%)
 Frame = -3

Query: 683 IMEGISVLDFDMLCATVALQAQTGGGFSSREKLDDDYESSGEFGGGVQRMWEGEILDCFE 504
           ++EG++VLDFDMLC+TVALQAQ G         + D E SGEFGG V RMWEGE+LDCFE
Sbjct: 21  LLEGVAVLDFDMLCSTVALQAQ-GKWTKFDHNGNGDDEDSGEFGG-VFRMWEGELLDCFE 78

Query: 503 DRRIAVETACCPCYRFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXNQRGFLYL 324
           DRRIA++TACCPCYRFGKNMRRAGFG CFIQG VY IL               +  FLY+
Sbjct: 79  DRRIAIQTACCPCYRFGKNMRRAGFGSCFIQGTVYFILSFSAFLSCIAFFVTKRHCFLYM 138

Query: 323 AIVLTVSSGTYLGFFRRQIRKQFNIGGSDSPLDDCVNHLICPCCTLCQESRTLDINNVQD 144
           A+  T+S GTY+GFFR QI+K+FNI G DS LDDCV HLICPCCTLCQESRTL++NNVQD
Sbjct: 139 AVAFTISIGTYMGFFRTQIKKKFNIRGGDSSLDDCVYHLICPCCTLCQESRTLEMNNVQD 198

Query: 143 GVWRGRGDTICIGSYGEGSKGFVELHQPPLIQTKSPDPCSMQRASN 6
           G W GRGDTICIGSYGE SK F ELH PPL+ TKSP+PCSMQ++++
Sbjct: 199 GTWHGRGDTICIGSYGESSKAFFELHPPPLVSTKSPEPCSMQKSTD 244


>ref|XP_002317257.1| predicted protein [Populus trichocarpa] gi|222860322|gb|EEE97869.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  302 bits (773), Expect = 9e-80
 Identities = 147/230 (63%), Positives = 170/230 (73%), Gaps = 5/230 (2%)
 Frame = -3

Query: 680 MEGISVLDFDMLCATVALQAQTG--GGFSSREKLDDD---YESSGEFGGGVQRMWEGEIL 516
           MEG+SVLDFDMLC+TVA+Q Q        S E+ DDD   Y + G  GGG  RMWEGE+L
Sbjct: 1   MEGMSVLDFDMLCSTVAMQTQGKYWAKLGSNEEEDDDLNRYNNGG--GGGGFRMWEGEVL 58

Query: 515 DCFEDRRIAVETACCPCYRFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXNQRG 336
           DCF+DRRIA+E+ CCPCYRFGKNMRRAGFG CF+QG  Y IL               +R 
Sbjct: 59  DCFDDRRIAIESLCCPCYRFGKNMRRAGFGSCFLQGIAYYILGLGALLNFIAFIVTKRRR 118

Query: 335 FLYLAIVLTVSSGTYLGFFRRQIRKQFNIGGSDSPLDDCVNHLICPCCTLCQESRTLDIN 156
           FLYL+IV T S G YLGFFR Q+RK+FNI GSDS LDDC+ HLICPCCTL QESRTL++N
Sbjct: 119 FLYLSIVFTFSLGIYLGFFRTQMRKKFNIRGSDSSLDDCIYHLICPCCTLSQESRTLEMN 178

Query: 155 NVQDGVWRGRGDTICIGSYGEGSKGFVELHQPPLIQTKSPDPCSMQRASN 6
           NVQDG W GRGDTIC+GSY EG+K F+ELH PP + T SPD CSMQ+ +N
Sbjct: 179 NVQDGTWHGRGDTICVGSYSEGNKVFLELHPPPAVTTSSPDVCSMQKNTN 228


>ref|XP_002305621.1| predicted protein [Populus trichocarpa] gi|222848585|gb|EEE86132.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  274 bits (700), Expect = 3e-71
 Identities = 131/232 (56%), Positives = 163/232 (70%), Gaps = 7/232 (3%)
 Frame = -3

Query: 680 MEGISVLDFDMLCATVALQAQTGGGFSSREKLDDD-------YESSGEFGGGVQRMWEGE 522
           MEG+SVLDFDMLC+TVA+Q Q G  ++  E  +++       Y +    GGG  RMWEGE
Sbjct: 1   MEGMSVLDFDMLCSTVAMQTQ-GKYWAKLESKEEEEEGDLRHYNNGVGGGGGGFRMWEGE 59

Query: 521 ILDCFEDRRIAVETACCPCYRFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXNQ 342
           +LDCF+D RIA+E+ CCPCYRFGKNMRR GFG CF+QG VY                   
Sbjct: 60  VLDCFDDCRIAIESLCCPCYRFGKNMRRTGFGSCFLQGVVYYAFAFSALLSFVAFIVTKH 119

Query: 341 RGFLYLAIVLTVSSGTYLGFFRRQIRKQFNIGGSDSPLDDCVNHLICPCCTLCQESRTLD 162
             FLY ++ +T   G YLGFFR Q++K+FNI GSDS LDDCV HLIC CC+L QESRTL+
Sbjct: 120 LYFLYFSVAITFFIGMYLGFFRTQMKKKFNIRGSDSSLDDCVYHLICSCCSLSQESRTLE 179

Query: 161 INNVQDGVWRGRGDTICIGSYGEGSKGFVELHQPPLIQTKSPDPCSMQRASN 6
           +NNVQDG+W GRGDTIC+GSY EG+K F+ELH P  +  KSPD CSMQ++++
Sbjct: 180 MNNVQDGIWHGRGDTICVGSYSEGNKVFLELHPPSAVAAKSPDICSMQKSTD 231


>ref|XP_004134741.1| PREDICTED: cell number regulator 5-like [Cucumis sativus]
           gi|449479411|ref|XP_004155592.1| PREDICTED: cell number
           regulator 5-like [Cucumis sativus]
          Length = 250

 Score =  263 bits (673), Expect = 4e-68
 Identities = 127/219 (57%), Positives = 161/219 (73%)
 Frame = -3

Query: 683 IMEGISVLDFDMLCATVALQAQTGGGFSSREKLDDDYESSGEFGGGVQRMWEGEILDCFE 504
           +++G+++LDFDMLC+TVA+Q Q  G + + +   D   ++ EFGG V RMWEGE+LDC++
Sbjct: 25  LLDGVTLLDFDMLCSTVAMQTQ--GKWPNLDTTQDP-ATAPEFGG-VFRMWEGELLDCYD 80

Query: 503 DRRIAVETACCPCYRFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXNQRGFLYL 324
           DRRIA+E+ACCPC+RFGKNM RAGFG CF+QG VYL L                  FLY 
Sbjct: 81  DRRIAIESACCPCHRFGKNMGRAGFGSCFLQGTVYLALALGALCNFIAFLVTKHHYFLYS 140

Query: 323 AIVLTVSSGTYLGFFRRQIRKQFNIGGSDSPLDDCVNHLICPCCTLCQESRTLDINNVQD 144
           AI  T+S+ TYLGFFR Q+R++FNI G D+ LDDC+ HLICPCC L QESRTL++NNVQD
Sbjct: 141 AIAFTISTVTYLGFFRTQMRRKFNIRGGDNSLDDCIYHLICPCCALSQESRTLEMNNVQD 200

Query: 143 GVWRGRGDTICIGSYGEGSKGFVELHQPPLIQTKSPDPC 27
           G W GRGDTICIGSYG+ S+ FVEL+ P  + TK P+ C
Sbjct: 201 GTWHGRGDTICIGSYGDASR-FVELNPPLPVSTKLPEAC 238


>ref|NP_001242047.1| uncharacterized protein LOC100806189 [Glycine max]
           gi|255638959|gb|ACU19781.1| unknown [Glycine max]
          Length = 255

 Score =  263 bits (673), Expect = 4e-68
 Identities = 122/232 (52%), Positives = 160/232 (68%), Gaps = 6/232 (2%)
 Frame = -3

Query: 683 IMEGISVLDFDMLCATVALQA------QTGGGFSSREKLDDDYESSGEFGGGVQRMWEGE 522
           ++EG++VLDFDMLC+TVAL+A      + G      E+ +++ E  GEFGG V RMWEGE
Sbjct: 20  LVEGVAVLDFDMLCSTVALRAAHGKWGKLGAEEEEEEEEEEEKEEGGEFGG-VLRMWEGE 78

Query: 521 ILDCFEDRRIAVETACCPCYRFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXNQ 342
           +LDCF+D RIA+E+ CCPCYRFGKNM+RAGFG C+IQ  +Y +L               +
Sbjct: 79  VLDCFDDHRIAIESTCCPCYRFGKNMKRAGFGSCYIQAAIYFLLAVGAFLNFIAFAVTRR 138

Query: 341 RGFLYLAIVLTVSSGTYLGFFRRQIRKQFNIGGSDSPLDDCVNHLICPCCTLCQESRTLD 162
             +LYL +   VS G YLGFFR ++RK+FNI GSDS +DDCV H  CPCCTLCQESRTL+
Sbjct: 139 HCYLYLTVAFVVSVGAYLGFFRTRLRKKFNIMGSDSSMDDCVYHFACPCCTLCQESRTLE 198

Query: 161 INNVQDGVWRGRGDTICIGSYGEGSKGFVELHQPPLIQTKSPDPCSMQRASN 6
           +NNV+DG W GRGD +CIG + + SKGF EL+ P ++     D  S++  +N
Sbjct: 199 MNNVRDGTWHGRGDKMCIGGFSQKSKGFFELNPPSIVSVN--DESSLETKTN 248


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