BLASTX nr result

ID: Coptis24_contig00004266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004266
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534539.1| kinase, putative [Ricinus communis] gi|22352...   120   1e-25
tpg|DAA60282.1| TPA: putative lectin-like receptor protein kinas...   115   5e-24
ref|NP_001183207.1| uncharacterized protein LOC100501591 precurs...   115   5e-24
emb|CAN77672.1| hypothetical protein VITISV_019444 [Vitis vinifera]   114   6e-24
ref|XP_003632669.1| PREDICTED: L-type lectin-domain containing r...   114   8e-24

>ref|XP_002534539.1| kinase, putative [Ricinus communis] gi|223525084|gb|EEF27843.1|
           kinase, putative [Ricinus communis]
          Length = 669

 Score =  120 bits (300), Expect = 1e-25
 Identities = 59/90 (65%), Positives = 74/90 (82%)
 Frame = +3

Query: 3   SSIILDSMYVGFSSSTGTVLTSHYILGWSFQMNGQAQALDLSRLPKLPRIGPKEQSKALT 182
           S I+ ++MYVGFSSSTG+VLTSHY+LGWS++MNGQAQ LDLS LPKLPRIGPK++SK +T
Sbjct: 227 SPILQNTMYVGFSSSTGSVLTSHYVLGWSYKMNGQAQPLDLSALPKLPRIGPKKRSKFVT 286

Query: 183 IGLPIIIPVFVATIISITFFVIRRKRKYAE 272
           IG+P I    +   IS + + IRRKRK+AE
Sbjct: 287 IGVPAISISSILIAISGSVYFIRRKRKFAE 316


>tpg|DAA60282.1| TPA: putative lectin-like receptor protein kinase family protein
           [Zea mays]
          Length = 721

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/91 (60%), Positives = 68/91 (74%)
 Frame = +3

Query: 3   SSIILDSMYVGFSSSTGTVLTSHYILGWSFQMNGQAQALDLSRLPKLPRIGPKEQSKALT 182
           +S++ D+ YVGFSS+TGT+ T HY+LGWSF MNG A A+D+SRLPKLPR+GPK  SKAL 
Sbjct: 274 TSVVTDAAYVGFSSATGTINTRHYVLGWSFAMNGPAPAIDVSRLPKLPRMGPKPLSKALE 333

Query: 183 IGLPIIIPVFVATIISITFFVIRRKRKYAEL 275
           I LPI    FV  + S  F ++RR  KYAEL
Sbjct: 334 IVLPIATAAFVLAVGSAAFLLVRRHLKYAEL 364


>ref|NP_001183207.1| uncharacterized protein LOC100501591 precursor [Zea mays]
           gi|238010066|gb|ACR36068.1| unknown [Zea mays]
          Length = 683

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/91 (60%), Positives = 68/91 (74%)
 Frame = +3

Query: 3   SSIILDSMYVGFSSSTGTVLTSHYILGWSFQMNGQAQALDLSRLPKLPRIGPKEQSKALT 182
           +S++ D+ YVGFSS+TGT+ T HY+LGWSF MNG A A+D+SRLPKLPR+GPK  SKAL 
Sbjct: 236 TSVVTDAAYVGFSSATGTINTRHYVLGWSFAMNGPAPAIDVSRLPKLPRMGPKPLSKALE 295

Query: 183 IGLPIIIPVFVATIISITFFVIRRKRKYAEL 275
           I LPI    FV  + S  F ++RR  KYAEL
Sbjct: 296 IVLPIATAAFVLAVGSAAFLLVRRHLKYAEL 326


>emb|CAN77672.1| hypothetical protein VITISV_019444 [Vitis vinifera]
          Length = 616

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/90 (62%), Positives = 74/90 (82%)
 Frame = +3

Query: 3   SSIILDSMYVGFSSSTGTVLTSHYILGWSFQMNGQAQALDLSRLPKLPRIGPKEQSKALT 182
           S I+ ++MYVGFSSSTG+VLTSHY+LGWSF+MNGQAQ L +S+LPKLPRIG +++S  LT
Sbjct: 228 SLILNNTMYVGFSSSTGSVLTSHYLLGWSFKMNGQAQPLAISQLPKLPRIGGQKKSAFLT 287

Query: 183 IGLPIIIPVFVATIISITFFVIRRKRKYAE 272
            GLP+I  V V  ++S   ++IRRK+K+AE
Sbjct: 288 SGLPVICVVSVLAVMSGAVYLIRRKKKFAE 317


>ref|XP_003632669.1| PREDICTED: L-type lectin-domain containing receptor kinase IV.2-like
            [Vitis vinifera]
          Length = 1258

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/90 (61%), Positives = 74/90 (82%)
 Frame = +3

Query: 3    SSIILDSMYVGFSSSTGTVLTSHYILGWSFQMNGQAQALDLSRLPKLPRIGPKEQSKALT 182
            S I+ ++MYVGFSSSTG+VLTSHY+LGWSF+MNGQAQ L +S+LPKLPRIG +++S  LT
Sbjct: 819  SLILNNTMYVGFSSSTGSVLTSHYLLGWSFKMNGQAQPLAISQLPKLPRIGGQKKSAFLT 878

Query: 183  IGLPIIIPVFVATIISITFFVIRRKRKYAE 272
             GLP+I  V +  ++S   ++IRRK+K+AE
Sbjct: 879  SGLPVICVVSILAVMSGAVYLIRRKKKFAE 908



 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/86 (53%), Positives = 62/86 (72%)
 Frame = +3

Query: 3   SSIILDSMYVGFSSSTGTVLTSHYILGWSFQMNGQAQALDLSRLPKLPRIGPKEQSKALT 182
           S I+ + MYVGFS+STG + +SHY+ GWSF+MNG A++LDLS LP LP   PKE+  ALT
Sbjct: 230 SPILQEFMYVGFSASTGLLASSHYVFGWSFKMNGVARSLDLSSLPSLPE--PKERHTALT 287

Query: 183 IGLPIIIPVFVATIISITFFVIRRKR 260
           IGL +   V V + +SI  ++IR+ R
Sbjct: 288 IGLSVSSVVLVISAVSIIIYMIRKIR 313


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