BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004263
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30170.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vit...   176   2e-42
gb|ACY30431.1| hypothetical protein [Nicotiana tabacum]               167   4e-42
ref|XP_002323495.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like...   171   6e-41

>emb|CBI30170.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  176 bits (445), Expect = 2e-42
 Identities = 87/117 (74%), Positives = 95/117 (81%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3   VTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADPYEI 182
           VTKQFDPETKQRSLLFQIEYPEIEDL KPRH+FMSS+EQR++S DKRYQYLLFAA+PYEI
Sbjct: 117 VTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEPYEI 176

Query: 183 IAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLHF---XXXXXXXXXXXXXNGTEAPG 344
           IAFKVPS EIDKS+ K F+HWDPDSKMFTLQL+F                NGT APG
Sbjct: 177 IAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASAANGTTAPG 233


>ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vitis vinifera]
          Length = 357

 Score =  176 bits (445), Expect = 2e-42
 Identities = 87/117 (74%), Positives = 95/117 (81%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3   VTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADPYEI 182
           VTKQFDPETKQRSLLFQIEYPEIEDL KPRH+FMSS+EQR++S DKRYQYLLFAA+PYEI
Sbjct: 117 VTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEPYEI 176

Query: 183 IAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLHF---XXXXXXXXXXXXXNGTEAPG 344
           IAFKVPS EIDKS+ K F+HWDPDSKMFTLQL+F                NGT APG
Sbjct: 177 IAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASAANGTTAPG 233


>gb|ACY30431.1| hypothetical protein [Nicotiana tabacum]
          Length = 253

 Score =  167 bits (423), Expect(2) = 4e-42
 Identities = 78/94 (82%), Positives = 88/94 (93%)
 Frame = +3

Query: 3   VTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADPYEI 182
           VTKQFDPETKQRSLLFQIEYPEIED TKPRH+FMSS+EQ+I+  DKRYQ+LLFAA+PYEI
Sbjct: 127 VTKQFDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQKIQPFDKRYQFLLFAAEPYEI 186

Query: 183 IAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLHF 284
           I+FKVPS EIDKS+ K F+HWDPDSKMFTLQL+F
Sbjct: 187 ISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYF 220



 Score = 29.3 bits (64), Expect(2) = 4e-42
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = +2

Query: 308 TCSSCEWNRSSWCFLKATATTS 373
           TCS  +W+ S+WC ++A+ +T+
Sbjct: 232 TCSCSKWDSSTWCPIQASTSTT 253


>ref|XP_002323495.1| predicted protein [Populus trichocarpa] gi|222868125|gb|EEF05256.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/94 (86%), Positives = 89/94 (94%)
 Frame = +3

Query: 3   VTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADPYEI 182
           VTKQFDPETKQRSLLFQIEYPEIED TKPRH+FMSSYEQRIE+ DKR+QYLLF+A+PYEI
Sbjct: 117 VTKQFDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSYEQRIEANDKRFQYLLFSAEPYEI 176

Query: 183 IAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLHF 284
           IAFKVPS EIDKS+ K F+HWDPDSKMFTLQL+F
Sbjct: 177 IAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYF 210


>ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 350

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/94 (84%), Positives = 88/94 (93%)
 Frame = +3

Query: 3   VTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADPYEI 182
           VTKQ+DPETKQRSLLFQIEYPEIEDLTKPRH+FMSSYEQR++  DK YQYLLFAA+PYEI
Sbjct: 117 VTKQYDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEI 176

Query: 183 IAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLHF 284
           +AFKVPS EIDKS+ K F+HWDPDSKMFTLQL+F
Sbjct: 177 VAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYF 210