BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004260
         (1485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530291.1| ubiquitin-protein ligase, putative [Ricinus ...   546   e-153
ref|XP_002282284.2| PREDICTED: F-box/kelch-repeat protein At5g60...   541   e-151
emb|CBI16301.3| unnamed protein product [Vitis vinifera]              541   e-151
ref|XP_003543480.1| PREDICTED: F-box/kelch-repeat protein At5g60...   532   e-148
ref|NP_001242021.1| uncharacterized protein LOC100820005 [Glycin...   524   e-146

>ref|XP_002530291.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223530189|gb|EEF32098.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 376

 Score =  546 bits (1408), Expect = e-153
 Identities = 253/348 (72%), Positives = 290/348 (83%)
 Frame = -2

Query: 1430 SDSLFPGLHDDIALNCLAWVPRSDYASLACLSNRFKMLVKSGCLHGLRKQMGIAEHWVYL 1251
            SDSL PGL DD+ALNCLAW  RSDYASLAC++ RF  L++SG L+GLRKQ+GI EHWVYL
Sbjct: 29   SDSLLPGLIDDVALNCLAWACRSDYASLACINKRFHKLIESGYLYGLRKQLGITEHWVYL 88

Query: 1250 VFDLKGWEAFDPTVKRWMKLPKIPCDDCFNHADKESLAVGNELLVFGRELYDLAIWKYNL 1071
            V D +GWEAFDP  K+WM LPKIPCD+CFNHADKESLAVG+ELLVFGREL+D AIWKY+L
Sbjct: 89   VCDPRGWEAFDPVRKKWMALPKIPCDECFNHADKESLAVGSELLVFGRELFDFAIWKYSL 148

Query: 1070 AHQNWVKCQGLNRPRCLXXXXXXXXXXXXXXXVDRKGTVLRSAELYNSDSGCWELLPNMH 891
              + WVKC+G+NRPRCL                D+ G VL SAELY+S +G WE+LPNMH
Sbjct: 149  IRRGWVKCEGMNRPRCLFGSGSLGSIAVVAGGSDKNGNVLNSAELYDSSTGKWEMLPNMH 208

Query: 890  SPRKLCSGFFMDGKFYVIGGVASATDSLSCGEEYNLQTRTWRKIEGMYTIENKAAQAPPL 711
            SPR+LCSGFFMDGKFYVIGG++S T SL+CGEEY+ +TR WR IEGMY   N+AAQAPPL
Sbjct: 209  SPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYDFETRKWRMIEGMYPNVNRAAQAPPL 268

Query: 710  VAVVDNQLYAVEHLKNIVKKYDKENNCWNELGRLPVRADSSNGWGLAFKACGKQLLVVGG 531
            VAVVDNQLYAVE+L N+VKKYDK  N W  LGRLPVRADSSNGWGLAFKACG++LLVVGG
Sbjct: 269  VAVVDNQLYAVEYLTNMVKKYDKVKNTWEVLGRLPVRADSSNGWGLAFKACGEKLLVVGG 328

Query: 530  QKGPEGEAIVLNSWCPSSGIVDGALEWKVLGKKESVGVFVYNCAVVGC 387
            Q+GPEGEA+VLNSWCP SG+ +G L+WKVLG KE VGVFVYNCAV+GC
Sbjct: 329  QRGPEGEAVVLNSWCPKSGVNNGTLDWKVLGVKEHVGVFVYNCAVMGC 376


>ref|XP_002282284.2| PREDICTED: F-box/kelch-repeat protein At5g60570-like [Vitis vinifera]
          Length = 416

 Score =  541 bits (1393), Expect = e-151
 Identities = 254/353 (71%), Positives = 289/353 (81%)
 Frame = -2

Query: 1445 GAARFSDSLFPGLHDDIALNCLAWVPRSDYASLACLSNRFKMLVKSGCLHGLRKQMGIAE 1266
            G    + SL PGL DD+AL CLA   RSDYASL+CL+ RF  L+KSG L+G RK +GIAE
Sbjct: 64   GQIETNGSLLPGLCDDVALKCLALACRSDYASLSCLNTRFNKLIKSGNLYGERKVLGIAE 123

Query: 1265 HWVYLVFDLKGWEAFDPTVKRWMKLPKIPCDDCFNHADKESLAVGNELLVFGRELYDLAI 1086
            HWVYLV DL+GWEAFD   K+WMKLPKIPCD+CFNHADKESLAVG+ELLVFGRE YD AI
Sbjct: 124  HWVYLVCDLRGWEAFDAMRKKWMKLPKIPCDECFNHADKESLAVGSELLVFGREFYDFAI 183

Query: 1085 WKYNLAHQNWVKCQGLNRPRCLXXXXXXXXXXXXXXXVDRKGTVLRSAELYNSDSGCWEL 906
            WKY+L   NW+KCQG+N PRCL                D+ G VL+SAELY+S SG WE+
Sbjct: 184  WKYSLVRGNWIKCQGMNLPRCLFGSSSLGSIAIVAGGSDKSGNVLKSAELYDSSSGRWEM 243

Query: 905  LPNMHSPRKLCSGFFMDGKFYVIGGVASATDSLSCGEEYNLQTRTWRKIEGMYTIENKAA 726
            LPNMHSPR+LCSGFFMDGKFYVIGG+ S TDSL+CGEE++L+TR WRKIEGMY   N+AA
Sbjct: 244  LPNMHSPRRLCSGFFMDGKFYVIGGMTSPTDSLTCGEEFDLKTREWRKIEGMYPNVNRAA 303

Query: 725  QAPPLVAVVDNQLYAVEHLKNIVKKYDKENNCWNELGRLPVRADSSNGWGLAFKACGKQL 546
            QAPPLVAVVDNQLYAVE+L N+VKKYDKE N W+ LGRLPVRAD SNGWGLAFKACG+QL
Sbjct: 304  QAPPLVAVVDNQLYAVEYLTNMVKKYDKEKNTWDVLGRLPVRADLSNGWGLAFKACGEQL 363

Query: 545  LVVGGQKGPEGEAIVLNSWCPSSGIVDGALEWKVLGKKESVGVFVYNCAVVGC 387
            LVVGGQ+GPEGEA+VLNSW P SG+ DG L+WKV+G KE VGVFVYNCAV+GC
Sbjct: 364  LVVGGQRGPEGEAVVLNSWHPKSGVKDGTLDWKVIGVKEHVGVFVYNCAVMGC 416


>emb|CBI16301.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  541 bits (1393), Expect = e-151
 Identities = 254/353 (71%), Positives = 289/353 (81%)
 Frame = -2

Query: 1445 GAARFSDSLFPGLHDDIALNCLAWVPRSDYASLACLSNRFKMLVKSGCLHGLRKQMGIAE 1266
            G    + SL PGL DD+AL CLA   RSDYASL+CL+ RF  L+KSG L+G RK +GIAE
Sbjct: 12   GQIETNGSLLPGLCDDVALKCLALACRSDYASLSCLNTRFNKLIKSGNLYGERKVLGIAE 71

Query: 1265 HWVYLVFDLKGWEAFDPTVKRWMKLPKIPCDDCFNHADKESLAVGNELLVFGRELYDLAI 1086
            HWVYLV DL+GWEAFD   K+WMKLPKIPCD+CFNHADKESLAVG+ELLVFGRE YD AI
Sbjct: 72   HWVYLVCDLRGWEAFDAMRKKWMKLPKIPCDECFNHADKESLAVGSELLVFGREFYDFAI 131

Query: 1085 WKYNLAHQNWVKCQGLNRPRCLXXXXXXXXXXXXXXXVDRKGTVLRSAELYNSDSGCWEL 906
            WKY+L   NW+KCQG+N PRCL                D+ G VL+SAELY+S SG WE+
Sbjct: 132  WKYSLVRGNWIKCQGMNLPRCLFGSSSLGSIAIVAGGSDKSGNVLKSAELYDSSSGRWEM 191

Query: 905  LPNMHSPRKLCSGFFMDGKFYVIGGVASATDSLSCGEEYNLQTRTWRKIEGMYTIENKAA 726
            LPNMHSPR+LCSGFFMDGKFYVIGG+ S TDSL+CGEE++L+TR WRKIEGMY   N+AA
Sbjct: 192  LPNMHSPRRLCSGFFMDGKFYVIGGMTSPTDSLTCGEEFDLKTREWRKIEGMYPNVNRAA 251

Query: 725  QAPPLVAVVDNQLYAVEHLKNIVKKYDKENNCWNELGRLPVRADSSNGWGLAFKACGKQL 546
            QAPPLVAVVDNQLYAVE+L N+VKKYDKE N W+ LGRLPVRAD SNGWGLAFKACG+QL
Sbjct: 252  QAPPLVAVVDNQLYAVEYLTNMVKKYDKEKNTWDVLGRLPVRADLSNGWGLAFKACGEQL 311

Query: 545  LVVGGQKGPEGEAIVLNSWCPSSGIVDGALEWKVLGKKESVGVFVYNCAVVGC 387
            LVVGGQ+GPEGEA+VLNSW P SG+ DG L+WKV+G KE VGVFVYNCAV+GC
Sbjct: 312  LVVGGQRGPEGEAVVLNSWHPKSGVKDGTLDWKVIGVKEHVGVFVYNCAVMGC 364


>ref|XP_003543480.1| PREDICTED: F-box/kelch-repeat protein At5g60570-like [Glycine max]
          Length = 389

 Score =  532 bits (1370), Expect = e-148
 Identities = 247/348 (70%), Positives = 286/348 (82%)
 Frame = -2

Query: 1430 SDSLFPGLHDDIALNCLAWVPRSDYASLACLSNRFKMLVKSGCLHGLRKQMGIAEHWVYL 1251
            +DSL PGL DD+ALNCLAWV  SDYA L+C++ RF  L+ SG L+GLRKQ+G  EH VY+
Sbjct: 42   NDSLIPGLIDDVALNCLAWVSGSDYAVLSCINKRFNKLINSGYLYGLRKQLGAVEHLVYM 101

Query: 1250 VFDLKGWEAFDPTVKRWMKLPKIPCDDCFNHADKESLAVGNELLVFGRELYDLAIWKYNL 1071
            V D +GW AFDP + RW+ LPKIPCD+CFNHADKESLAVG ELLVFGREL + AIWKY++
Sbjct: 102  VCDPRGWVAFDPKINRWISLPKIPCDECFNHADKESLAVGCELLVFGRELMEFAIWKYSM 161

Query: 1070 AHQNWVKCQGLNRPRCLXXXXXXXXXXXXXXXVDRKGTVLRSAELYNSDSGCWELLPNMH 891
              + WVKCQ +N+PRCL                D+ G VL+SAELY+S +G WELLPNMH
Sbjct: 162  ICRGWVKCQEMNQPRCLFGSSSLGSIAIVAGGSDKYGNVLKSAELYDSSTGMWELLPNMH 221

Query: 890  SPRKLCSGFFMDGKFYVIGGVASATDSLSCGEEYNLQTRTWRKIEGMYTIENKAAQAPPL 711
            +PR+LCSGFFMDGKFYVIGG++S T SLSCGEEY+L+TR+WRKIEGMY   N   QAPPL
Sbjct: 222  APRRLCSGFFMDGKFYVIGGMSSTTVSLSCGEEYDLKTRSWRKIEGMYPYVNVGVQAPPL 281

Query: 710  VAVVDNQLYAVEHLKNIVKKYDKENNCWNELGRLPVRADSSNGWGLAFKACGKQLLVVGG 531
            VAVVDNQLYAVEHL N+VKKYDKE N WNELGRLPVRADSSNGWGLAFKACG+QLLVVGG
Sbjct: 282  VAVVDNQLYAVEHLTNMVKKYDKERNTWNELGRLPVRADSSNGWGLAFKACGEQLLVVGG 341

Query: 530  QKGPEGEAIVLNSWCPSSGIVDGALEWKVLGKKESVGVFVYNCAVVGC 387
            Q+GPEGEAIVL+SWCP SGI +G ++W+VLG KE VGVFVYNCAV+GC
Sbjct: 342  QRGPEGEAIVLSSWCPKSGISNGTIDWQVLGVKEHVGVFVYNCAVMGC 389


>ref|NP_001242021.1| uncharacterized protein LOC100820005 [Glycine max]
            gi|255641445|gb|ACU20998.1| unknown [Glycine max]
          Length = 364

 Score =  524 bits (1350), Expect = e-146
 Identities = 243/348 (69%), Positives = 283/348 (81%)
 Frame = -2

Query: 1430 SDSLFPGLHDDIALNCLAWVPRSDYASLACLSNRFKMLVKSGCLHGLRKQMGIAEHWVYL 1251
            +DSL PGL DD+ALNCLAWV  SDYA+L+C++ RF  L+ SG L+GLRKQ+G  EH VY+
Sbjct: 17   NDSLLPGLIDDVALNCLAWVSGSDYAALSCINKRFNKLIHSGYLYGLRKQLGAVEHLVYM 76

Query: 1250 VFDLKGWEAFDPTVKRWMKLPKIPCDDCFNHADKESLAVGNELLVFGRELYDLAIWKYNL 1071
            V D +GW AFDP + RWM LPKIPCD+CFNHADKESLAVG ELLVFGREL + AIWKY++
Sbjct: 77   VCDPRGWVAFDPKINRWMSLPKIPCDECFNHADKESLAVGCELLVFGRELMEFAIWKYSM 136

Query: 1070 AHQNWVKCQGLNRPRCLXXXXXXXXXXXXXXXVDRKGTVLRSAELYNSDSGCWELLPNMH 891
              + WVKCQ +N+PRCL                D+ G VL+SAELY+S +G WE LPNMH
Sbjct: 137  ICRGWVKCQEMNQPRCLFGSSSLGSIAIVAGGSDKYGNVLKSAELYDSSTGMWEPLPNMH 196

Query: 890  SPRKLCSGFFMDGKFYVIGGVASATDSLSCGEEYNLQTRTWRKIEGMYTIENKAAQAPPL 711
            + R+LCSGFFMDGKFYVIGG++S T SLSCGEEY+L+TR+WRKIEGMY   N   QAPPL
Sbjct: 197  TSRRLCSGFFMDGKFYVIGGMSSTTVSLSCGEEYDLKTRSWRKIEGMYPYVNVGVQAPPL 256

Query: 710  VAVVDNQLYAVEHLKNIVKKYDKENNCWNELGRLPVRADSSNGWGLAFKACGKQLLVVGG 531
            VAVVDNQLYAVEHL N+ KKYDKE N WNELGRLPVRADSSNGWGLAFK CG+QLLVVGG
Sbjct: 257  VAVVDNQLYAVEHLTNMAKKYDKEKNTWNELGRLPVRADSSNGWGLAFKVCGEQLLVVGG 316

Query: 530  QKGPEGEAIVLNSWCPSSGIVDGALEWKVLGKKESVGVFVYNCAVVGC 387
            Q+GPEGE+IVL+SWCP SGI +G ++W+VLG KE VGVFVYNCAV+GC
Sbjct: 317  QRGPEGESIVLSSWCPKSGISNGTIDWQVLGVKEHVGVFVYNCAVMGC 364