BLASTX nr result

ID: Coptis24_contig00004254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004254
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2...    77   1e-12
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...    77   1e-12
ref|XP_002317351.1| multidrug resistance protein ABC transporter...    75   4e-12
ref|XP_002526610.1| mgatp-energized glutathione s-conjugate pump...    74   2e-11
dbj|BAG16520.1| putative multidrug resistance-associated protein...    74   2e-11

>ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis
            vinifera]
          Length = 1616

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/53 (69%), Positives = 44/53 (83%)
 Frame = -2

Query: 380  ENNILKKTKDVVISLQSVLEEKHDKVIEDTLNQYQFPRDR*WWLALYTLVEGV 222
            EN+ILKKTKD VI+LQ VLE KHDKVIE+TLNQYQ  RD  WW +LY ++EG+
Sbjct: 1536 ENSILKKTKDAVITLQGVLEGKHDKVIEETLNQYQVSRDG-WWSSLYRMIEGL 1587


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
            vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
            product [Vitis vinifera]
          Length = 1623

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/53 (69%), Positives = 44/53 (83%)
 Frame = -2

Query: 380  ENNILKKTKDVVISLQSVLEEKHDKVIEDTLNQYQFPRDR*WWLALYTLVEGV 222
            EN+ILKKTKD VI+LQ VLE KHDKVIE+TLNQYQ  RD  WW +LY ++EG+
Sbjct: 1543 ENSILKKTKDAVITLQGVLEGKHDKVIEETLNQYQVSRDG-WWSSLYRMIEGL 1594


>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1617

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/53 (66%), Positives = 44/53 (83%)
 Frame = -2

Query: 380  ENNILKKTKDVVISLQSVLEEKHDKVIEDTLNQYQFPRDR*WWLALYTLVEGV 222
            EN++LKKTKD V++LQ VLE KHDKVI+++LNQYQ  RD  WW ALY +VEG+
Sbjct: 1536 ENSVLKKTKDAVVTLQRVLEGKHDKVIDESLNQYQISRDG-WWSALYKMVEGL 1587


>ref|XP_002526610.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
            communis] gi|223534050|gb|EEF35769.1| mgatp-energized
            glutathione s-conjugate pump, putative [Ricinus communis]
          Length = 1626

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/53 (64%), Positives = 43/53 (81%)
 Frame = -2

Query: 380  ENNILKKTKDVVISLQSVLEEKHDKVIEDTLNQYQFPRDR*WWLALYTLVEGV 222
            ENNIL KTKD VI+L+ VLE KHD+VI++TL +YQ PRD  WW +LY +VEG+
Sbjct: 1543 ENNILNKTKDAVITLKDVLEGKHDEVIDETLERYQVPRDG-WWFSLYRIVEGL 1594


>dbj|BAG16520.1| putative multidrug resistance-associated protein [Capsicum chinense]
          Length = 1617

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/53 (66%), Positives = 44/53 (83%)
 Frame = -2

Query: 380  ENNILKKTKDVVISLQSVLEEKHDKVIEDTLNQYQFPRDR*WWLALYTLVEGV 222
            E+NILKKTK+ VI+LQ VLE KHDK IE+TL+QYQ  RDR WW +LY ++EG+
Sbjct: 1537 EDNILKKTKNAVITLQGVLEGKHDKDIEETLDQYQVSRDR-WWSSLYKMIEGL 1588


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