BLASTX nr result

ID: Coptis24_contig00004253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004253
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump...   147   2e-33
ref|XP_002317351.1| multidrug resistance protein ABC transporter...   144   1e-32
ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2...   138   7e-31
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...   138   7e-31
dbj|BAG16520.1| putative multidrug resistance-associated protein...   132   5e-29

>ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
            communis] gi|223534049|gb|EEF35768.1| mgatp-energized
            glutathione s-conjugate pump, putative [Ricinus communis]
          Length = 1569

 Score =  147 bits (371), Expect = 2e-33
 Identities = 68/92 (73%), Positives = 84/92 (91%)
 Frame = +1

Query: 4    NDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKVIEDTLTQYQIPRDRWWSALYKVVE 183
            NDLQ+LEI+DEN+IL+KTKDAVITLQGVLEGKHDKVIE++L Q+QI +D WWSALYK+VE
Sbjct: 1478 NDLQRLEIDDENSILEKTKDAVITLQGVLEGKHDKVIEESLNQHQISKDGWWSALYKMVE 1537

Query: 184  GLSMISRLGRSRFQQLDYGLENRSINWDDDDM 279
            GL+M+SRLGR+R  Q DYG ++RSINWD+ +M
Sbjct: 1538 GLAMMSRLGRNRLHQSDYGFDDRSINWDNVEM 1569


>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1617

 Score =  144 bits (364), Expect = 1e-32
 Identities = 67/93 (72%), Positives = 83/93 (89%)
 Frame = +1

Query: 1    QNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKVIEDTLTQYQIPRDRWWSALYKVV 180
            QNDLQ+LEIEDEN++LKKTKDAV+TLQ VLEGKHDKVI+++L QYQI RD WWSALYK+V
Sbjct: 1525 QNDLQQLEIEDENSVLKKTKDAVVTLQRVLEGKHDKVIDESLNQYQISRDGWWSALYKMV 1584

Query: 181  EGLSMISRLGRSRFQQLDYGLENRSINWDDDDM 279
            EGL+M+SRLGR R  Q DYGLE+++I+W+  +M
Sbjct: 1585 EGLAMMSRLGRHRLHQSDYGLEDKTIDWNHVEM 1617


>ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis
            vinifera]
          Length = 1616

 Score =  138 bits (348), Expect = 7e-31
 Identities = 66/93 (70%), Positives = 82/93 (88%)
 Frame = +1

Query: 1    QNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKVIEDTLTQYQIPRDRWWSALYKVV 180
            QNDLQ+LEIEDEN+ILKKTKDAVITLQGVLEGKHDKVIE+TL QYQ+ RD WWS+LY+++
Sbjct: 1525 QNDLQQLEIEDENSILKKTKDAVITLQGVLEGKHDKVIEETLNQYQVSRDGWWSSLYRMI 1584

Query: 181  EGLSMISRLGRSRFQQLDYGLENRSINWDDDDM 279
            EGL+++SRL R+R Q  + G E+RSI+WD  +M
Sbjct: 1585 EGLAVMSRLARNRLQS-ENGFEDRSIDWDRIEM 1616


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
            vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
            product [Vitis vinifera]
          Length = 1623

 Score =  138 bits (348), Expect = 7e-31
 Identities = 66/93 (70%), Positives = 82/93 (88%)
 Frame = +1

Query: 1    QNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKVIEDTLTQYQIPRDRWWSALYKVV 180
            QNDLQ+LEIEDEN+ILKKTKDAVITLQGVLEGKHDKVIE+TL QYQ+ RD WWS+LY+++
Sbjct: 1532 QNDLQQLEIEDENSILKKTKDAVITLQGVLEGKHDKVIEETLNQYQVSRDGWWSSLYRMI 1591

Query: 181  EGLSMISRLGRSRFQQLDYGLENRSINWDDDDM 279
            EGL+++SRL R+R Q  + G E+RSI+WD  +M
Sbjct: 1592 EGLAVMSRLARNRLQS-ENGFEDRSIDWDRIEM 1623


>dbj|BAG16520.1| putative multidrug resistance-associated protein [Capsicum chinense]
          Length = 1617

 Score =  132 bits (332), Expect = 5e-29
 Identities = 62/93 (66%), Positives = 81/93 (87%)
 Frame = +1

Query: 1    QNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKVIEDTLTQYQIPRDRWWSALYKVV 180
            QNDL +LEIEDE+NILKKTK+AVITLQGVLEGKHDK IE+TL QYQ+ RDRWWS+LYK++
Sbjct: 1526 QNDLVQLEIEDEDNILKKTKNAVITLQGVLEGKHDKDIEETLDQYQVSRDRWWSSLYKMI 1585

Query: 181  EGLSMISRLGRSRFQQLDYGLENRSINWDDDDM 279
            EGL+M+S+L R+R  Q ++  ++++INWD  +M
Sbjct: 1586 EGLAMMSKLARNRL-QAEFEFDDKTINWDRAEM 1617


Top