BLASTX nr result
ID: Coptis24_contig00004240
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004240 (441 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-l... 89 5e-16 ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-l... 88 8e-16 ref|XP_002310906.1| high mobility group family [Populus trichoca... 87 1e-15 gb|AEO36233.1| hypothetical protein [Amblyomma maculatum] 83 2e-14 gb|AFK37944.1| unknown [Lotus japonicus] 80 2e-13 >ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera] gi|147815109|emb|CAN61363.1| hypothetical protein VITISV_034306 [Vitis vinifera] gi|297742725|emb|CBI35359.3| unnamed protein product [Vitis vinifera] Length = 190 Score = 88.6 bits (218), Expect = 5e-16 Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 12/148 (8%) Frame = +3 Query: 3 KLRMKMELQVIXXXXXXXXXXXXNVSKKRVGK-------PAASKGKRAKKSTDPNMPKRP 161 K+++ +E QV+ +V KK K P K +R +K DPNMPKRP Sbjct: 51 KIKLNLEAQVVEKVT--------DVKKKPAEKKNATTTEPKPKKSRRLRKVKDPNMPKRP 102 Query: 162 PTAYFLFMDDFRKSYKEAHPENNKVTVVSKXXXXXXXXXXXXXXXVYLDRAAXXXXXXXX 341 PTA+FLFMDDFRK YKE++P++ V+VV+K Y+D+AA Sbjct: 103 PTAFFLFMDDFRKEYKESNPDSKNVSVVAKEGGEKWKSMTDEEKKPYVDKAAELKAEYDK 162 Query: 342 XXXXXNAENED-----GKEEVVELDNDE 410 NAEN + GKE +EL +DE Sbjct: 163 AMETYNAENGEEEGGSGKEADLELIDDE 190 >ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus] gi|449531370|ref|XP_004172659.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus] Length = 207 Score = 87.8 bits (216), Expect = 8e-16 Identities = 52/138 (37%), Positives = 67/138 (48%), Gaps = 1/138 (0%) Frame = +3 Query: 3 KLRMKMELQVIXXXXXXXXXXXXNVSKKRVGKPAASKG-KRAKKSTDPNMPKRPPTAYFL 179 K+RM +E Q + S K S+ K+ KK DPN PKRPPTA+F+ Sbjct: 61 KIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFI 120 Query: 180 FMDDFRKSYKEAHPENNKVTVVSKXXXXXXXXXXXXXXXVYLDRAAXXXXXXXXXXXXXN 359 FMDDFRKSYKEA+P++ V V+K Y D+AA N Sbjct: 121 FMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALESRN 180 Query: 360 AENEDGKEEVVELDNDEE 413 AENED ++E E + EE Sbjct: 181 AENEDDEKETEETEEIEE 198 >ref|XP_002310906.1| high mobility group family [Populus trichocarpa] gi|118483462|gb|ABK93630.1| unknown [Populus trichocarpa] gi|222853809|gb|EEE91356.1| high mobility group family [Populus trichocarpa] Length = 201 Score = 87.4 bits (215), Expect = 1e-15 Identities = 54/145 (37%), Positives = 71/145 (48%), Gaps = 8/145 (5%) Frame = +3 Query: 3 KLRMKMELQVIXXXXXXXXXXXXNVSKKRVGKPAASKGKRAKKSTDPNMPKRPPTAYFLF 182 K++M +E QV+ K +P K K+ KK DPN PKRPPTA+FLF Sbjct: 57 KIKMNLEAQVVEKPTEAKQKPAER-KKGSSTEPKLKKAKKEKKGRDPNAPKRPPTAFFLF 115 Query: 183 MDDFRKSYKEAHPENNKVTVVSKXXXXXXXXXXXXXXXVYLDRAAXXXXXXXXXXXXXNA 362 MDDFRK YKEA+P++ V V+K Y+D+AA NA Sbjct: 116 MDDFRKEYKEANPDSKDVKKVAKEGGVRWKSMTDEEKKQYVDKAAELKAENDKALESDNA 175 Query: 363 ENED-----GKEEVVEL---DNDEE 413 ENED ++EV +L D +EE Sbjct: 176 ENEDDEGVSSEKEVADLELRDKEEE 200 >gb|AEO36233.1| hypothetical protein [Amblyomma maculatum] Length = 208 Score = 83.2 bits (204), Expect = 2e-14 Identities = 57/155 (36%), Positives = 74/155 (47%), Gaps = 9/155 (5%) Frame = +3 Query: 3 KLRMKMELQVIXXXXXXXXXXXXNVSKKRVGKPAASKG---KRAKKSTDPNMPKRPPTAY 173 K+RM +E QV+ V +KR P+ +K K+ KK+ + N PKR PTA+ Sbjct: 56 KIRMNLEAQVVEKETEVKNKP---VERKRAA-PSENKERKVKKGKKNVNTNKPKRAPTAF 111 Query: 174 FLFMDDFRKSYKEAHPENNKVTVVSKXXXXXXXXXXXXXXXVYLDRAAXXXXXXXXXXXX 353 FLFMDDFRK YKE HP+N V V+K Y DRAA Sbjct: 112 FLFMDDFRKEYKELHPDNKSVASVAKEGGERWRSMTIEEKKPYTDRAAELKAEYVKEIEE 171 Query: 354 XN------AENEDGKEEVVELDNDEECAPQEEEME 440 ENE +EE VE +N++E A +E E E Sbjct: 172 KADGGEEVKENEKEQEEEVEEENEKEDATEENEEE 206 >gb|AFK37944.1| unknown [Lotus japonicus] Length = 197 Score = 80.1 bits (196), Expect = 2e-13 Identities = 50/144 (34%), Positives = 68/144 (47%) Frame = +3 Query: 3 KLRMKMELQVIXXXXXXXXXXXXNVSKKRVGKPAASKGKRAKKSTDPNMPKRPPTAYFLF 182 K++M ++ QVI S K K +K ++AKK DPN PKRPPTA+F+F Sbjct: 54 KIKMNLDAQVIEQANEAKKTERKKPSSKEP-KAKRAKTEKAKKVEDPNQPKRPPTAFFVF 112 Query: 183 MDDFRKSYKEAHPENNKVTVVSKXXXXXXXXXXXXXXXVYLDRAAXXXXXXXXXXXXXNA 362 +DDFRK +KEA+P + V V K YL++ A NA Sbjct: 113 LDDFRKEFKEANPGSKDVKRVGKEGGEKWRAMTDEEKKPYLEKVAELKEEYEKAMANYNA 172 Query: 363 ENEDGKEEVVELDNDEECAPQEEE 434 ++ KEE D+E AP E E Sbjct: 173 AEDEEKEEA-----DKEAAPTEIE 191