BLASTX nr result

ID: Coptis24_contig00004237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004237
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319497.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
dbj|BAJ53148.1| JHL23J11.3 [Jatropha curcas]                          192   3e-47
emb|CBI39555.3| unnamed protein product [Vitis vinifera]              191   4e-47
ref|XP_002283131.1| PREDICTED: uncharacterized protein LOC100266...   191   4e-47
emb|CAN79776.1| hypothetical protein VITISV_013614 [Vitis vinifera]   191   4e-47

>ref|XP_002319497.1| predicted protein [Populus trichocarpa] gi|222857873|gb|EEE95420.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  194 bits (492), Expect = 8e-48
 Identities = 91/96 (94%), Positives = 95/96 (98%)
 Frame = -2

Query: 290 MANRTDPTAKNIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHVGGT 111
           MANRTDPTAKNI GTNPQNLVEKILRSKIYQ+TYWKEQCFGLTAETLVDKAMELDH+GGT
Sbjct: 1   MANRTDPTAKNIRGTNPQNLVEKILRSKIYQHTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 110 FGGNRRPTPFMCLVMKMLQIQPEKDIVVEFIKNEDY 3
           +GGNR+PTPFMCLVMKMLQIQPEKDIVVEFIKNEDY
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDY 96


>dbj|BAJ53148.1| JHL23J11.3 [Jatropha curcas]
          Length = 390

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/96 (93%), Positives = 94/96 (97%)
 Frame = -2

Query: 290 MANRTDPTAKNIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHVGGT 111
           MANRTDP AK+I GTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDH+GGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 110 FGGNRRPTPFMCLVMKMLQIQPEKDIVVEFIKNEDY 3
           FGGNR+PTPFMCLVMKMLQIQPEKDIVVEFIKN+DY
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNDDY 96


>emb|CBI39555.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  191 bits (486), Expect = 4e-47
 Identities = 90/96 (93%), Positives = 94/96 (97%)
 Frame = -2

Query: 290 MANRTDPTAKNIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHVGGT 111
           MANRTDP AK+I GTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDH+GGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 110 FGGNRRPTPFMCLVMKMLQIQPEKDIVVEFIKNEDY 3
           FGGNR+PTPFMCLVMKMLQIQPEKDIVVEFIKNE+Y
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEEY 96


>ref|XP_002283131.1| PREDICTED: uncharacterized protein LOC100266508 [Vitis vinifera]
          Length = 393

 Score =  191 bits (486), Expect = 4e-47
 Identities = 90/96 (93%), Positives = 94/96 (97%)
 Frame = -2

Query: 290 MANRTDPTAKNIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHVGGT 111
           MANRTDP AK+I GTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDH+GGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 110 FGGNRRPTPFMCLVMKMLQIQPEKDIVVEFIKNEDY 3
           FGGNR+PTPFMCLVMKMLQIQPEKDIVVEFIKNE+Y
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEEY 96


>emb|CAN79776.1| hypothetical protein VITISV_013614 [Vitis vinifera]
          Length = 235

 Score =  191 bits (486), Expect = 4e-47
 Identities = 90/96 (93%), Positives = 94/96 (97%)
 Frame = -2

Query: 290 MANRTDPTAKNIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHVGGT 111
           MANRTDP AK+I GTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDH+GGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 110 FGGNRRPTPFMCLVMKMLQIQPEKDIVVEFIKNEDY 3
           FGGNR+PTPFMCLVMKMLQIQPEKDIVVEFIKNE+Y
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEEY 96


Top