BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004228
         (1648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278249.1| PREDICTED: 26S proteasome non-ATPase regulat...   558   0.0  
gb|ACF06585.1| 26S proteasome subunit RPN5b [Elaeis guineensis]       558   0.0  
ref|XP_003525095.1| PREDICTED: 26S proteasome non-ATPase regulat...   555   0.0  
ref|XP_003531394.1| PREDICTED: 26S proteasome non-ATPase regulat...   549   0.0  
ref|XP_002310051.1| predicted protein [Populus trichocarpa] gi|2...   558   0.0  

>ref|XP_002278249.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 12-like
            [Vitis vinifera]
          Length = 442

 Score =  558 bits (1438), Expect(2) = 0.0
 Identities = 273/313 (87%), Positives = 299/313 (95%)
 Frame = -2

Query: 1224 ADTSKEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEK 1045
            AD  +EIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD+SKEK
Sbjct: 130  ADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADSSKEK 189

Query: 1044 KKPKEGDNVVEEAPADIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKAIYDISSVKED 865
            KKPKEGD+VVEEAPADIPSL ELKRIYYELMIRY+SH+NDYLEICR YKAIY+I SV+ED
Sbjct: 190  KKPKEGDSVVEEAPADIPSLPELKRIYYELMIRYHSHSNDYLEICRSYKAIYEIPSVRED 249

Query: 864  PTKWVPVLRKICWYLVLAPHDPMQSSLLNSTLEDKNLSEIPNFGELLKQLVTMEVIQWTA 685
            P +W+PVLRKICWYLVL+PHDPMQSSLLNSTLEDKNLSEIPNF  LLKQLVTMEVIQW +
Sbjct: 250  PAQWIPVLRKICWYLVLSPHDPMQSSLLNSTLEDKNLSEIPNFRLLLKQLVTMEVIQWIS 309

Query: 684  LWETCQNEFENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYARLTLQRLAKLLCLTI 505
            LW   ++EFENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYY+R+TL+RLA+LLCL++
Sbjct: 310  LWNMFKDEFENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYSRITLKRLAELLCLSV 369

Query: 504  EETEKHLSDMVVSKSLVAKVDRPMGTVCFQTAKDSNEVLNSWAMNLERLLDLVEKSCHQI 325
            +E EKHLSDMVVSKSLVAK+DRPMG VCFQTAKDSN++LNSW+MNLE+LLDLVEKSCHQI
Sbjct: 370  QEAEKHLSDMVVSKSLVAKIDRPMGVVCFQTAKDSNDILNSWSMNLEKLLDLVEKSCHQI 429

Query: 324  HKETMIHKAALKV 286
            HKETM+HKAALKV
Sbjct: 430  HKETMVHKAALKV 442



 Score =  160 bits (404), Expect(2) = 0.0
 Identities = 84/116 (72%), Positives = 96/116 (82%)
 Frame = -1

Query: 1642 MEGGDNLDAQIESLLNVEKQSRLAENVSATKKAVIDIIQLCYGARAWKTLNEQILILSKR 1463
            ME   NLDA+IE+LLNVEKQ RLA +VS TKKAV DI+QLC+ ARAWKTLN+QI++LSKR
Sbjct: 1    MEAQRNLDAEIEALLNVEKQIRLAGDVSGTKKAVTDILQLCFEARAWKTLNDQIVLLSKR 60

Query: 1462 RGQLKXXXXXXXXXXXQYIDDTPDIEARVELIKTLNSVSAGKIYVELERARLIKKL 1295
            RGQLK           QYID TPDIE+++ELIKTLNSVSAGKIYVE+ERARLIKKL
Sbjct: 61   RGQLKQAVTAMVQQAMQYIDQTPDIESKIELIKTLNSVSAGKIYVEIERARLIKKL 116


>gb|ACF06585.1| 26S proteasome subunit RPN5b [Elaeis guineensis]
          Length = 440

 Score =  558 bits (1438), Expect(2) = 0.0
 Identities = 275/312 (88%), Positives = 295/312 (94%)
 Frame = -2

Query: 1224 ADTSKEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEK 1045
            AD  +EIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD SKEK
Sbjct: 128  ADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADPSKEK 187

Query: 1044 KKPKEGDNVVEEAPADIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKAIYDISSVKED 865
            KKPKEGDNVVEEAPADIPSLLELKRIYYELMIRY+SHNNDYLEICR YKAIYDI SVKED
Sbjct: 188  KKPKEGDNVVEEAPADIPSLLELKRIYYELMIRYHSHNNDYLEICRSYKAIYDIPSVKED 247

Query: 864  PTKWVPVLRKICWYLVLAPHDPMQSSLLNSTLEDKNLSEIPNFGELLKQLVTMEVIQWTA 685
            P +W+PVLRKICWYLVL+PHDPMQSSLLNSTLEDKNLSEIPNF  LLKQLVTMEVIQWT 
Sbjct: 248  PAQWIPVLRKICWYLVLSPHDPMQSSLLNSTLEDKNLSEIPNFRLLLKQLVTMEVIQWTG 307

Query: 684  LWETCQNEFENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYARLTLQRLAKLLCLTI 505
            LWE  ++EFENEK+MLGGSLG KAAEDL+ RIIEHNILVVSKYY+R+TL+RLA LLCL++
Sbjct: 308  LWEMYKDEFENEKSMLGGSLGAKAAEDLKLRIIEHNILVVSKYYSRITLKRLADLLCLSL 367

Query: 504  EETEKHLSDMVVSKSLVAKVDRPMGTVCFQTAKDSNEVLNSWAMNLERLLDLVEKSCHQI 325
            +E EKHLSDMVVSKSLVAK+DRPMG VCFQTAKDSN++LNSWAMNLE+LLDLVEKSCHQI
Sbjct: 368  QEAEKHLSDMVVSKSLVAKIDRPMGIVCFQTAKDSNDILNSWAMNLEKLLDLVEKSCHQI 427

Query: 324  HKETMIHKAALK 289
            HKETM+HKA LK
Sbjct: 428  HKETMVHKAVLK 439



 Score =  155 bits (393), Expect(2) = 0.0
 Identities = 80/112 (71%), Positives = 93/112 (83%)
 Frame = -1

Query: 1630 DNLDAQIESLLNVEKQSRLAENVSATKKAVIDIIQLCYGARAWKTLNEQILILSKRRGQL 1451
            +NLDA IESLLNVEKQ RLA +V+ TKKAV DI++LCY A AWKTLN+QI++LSKRRGQL
Sbjct: 3    ENLDAAIESLLNVEKQMRLAGDVAGTKKAVTDIVELCYKAGAWKTLNDQIVLLSKRRGQL 62

Query: 1450 KXXXXXXXXXXXQYIDDTPDIEARVELIKTLNSVSAGKIYVELERARLIKKL 1295
            K           QYID+TPD++ R+ELIKTLNSVSAGKIYVE+ERARLIKKL
Sbjct: 63   KQAVTSMVQQAMQYIDETPDVDTRIELIKTLNSVSAGKIYVEIERARLIKKL 114


>ref|XP_003525095.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 12-like
            [Glycine max]
          Length = 441

 Score =  555 bits (1430), Expect(2) = 0.0
 Identities = 274/313 (87%), Positives = 297/313 (94%)
 Frame = -2

Query: 1224 ADTSKEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEK 1045
            AD  +EIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD SKEK
Sbjct: 130  ADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADLSKEK 189

Query: 1044 KKPKEGDNVVEEAPADIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKAIYDISSVKED 865
            KKPKEGDNVVEEAPADIPSLLELK+IYYELMIRYYSHNNDYLEICRCYKAIY+I SVKED
Sbjct: 190  KKPKEGDNVVEEAPADIPSLLELKQIYYELMIRYYSHNNDYLEICRCYKAIYEIPSVKED 249

Query: 864  PTKWVPVLRKICWYLVLAPHDPMQSSLLNSTLEDKNLSEIPNFGELLKQLVTMEVIQWTA 685
            P KW+P+LRKICWYLVLAP+DPMQSSLLNSTLEDKN+SEIPNF  LLKQLVTMEVIQWT 
Sbjct: 250  PAKWIPILRKICWYLVLAPYDPMQSSLLNSTLEDKNISEIPNFKLLLKQLVTMEVIQWTT 309

Query: 684  LWETCQNEFENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYARLTLQRLAKLLCLTI 505
            LW+T +++FENEK   G SLG+KAAEDLRQRIIEHNILVVSKYYAR+TL+RLA+LLCL+I
Sbjct: 310  LWDTYKSDFENEK-ASGKSLGEKAAEDLRQRIIEHNILVVSKYYARITLKRLAELLCLSI 368

Query: 504  EETEKHLSDMVVSKSLVAKVDRPMGTVCFQTAKDSNEVLNSWAMNLERLLDLVEKSCHQI 325
            ++ EKHLSDMVVSK+LVAK+DRPMG VCFQTAKDSNE+LNSWA NLE+LLDLVEKSCHQI
Sbjct: 369  QDAEKHLSDMVVSKALVAKIDRPMGIVCFQTAKDSNEILNSWAANLEKLLDLVEKSCHQI 428

Query: 324  HKETMIHKAALKV 286
            HKETM+HKAALKV
Sbjct: 429  HKETMVHKAALKV 441



 Score =  155 bits (392), Expect(2) = 0.0
 Identities = 81/116 (69%), Positives = 92/116 (79%)
 Frame = -1

Query: 1642 MEGGDNLDAQIESLLNVEKQSRLAENVSATKKAVIDIIQLCYGARAWKTLNEQILILSKR 1463
            M    NLDA IE LLNVEKQ RLA +V+ T+KA  DI+QLC+ ARAWKTLN+QI++LSKR
Sbjct: 1    MANTGNLDAAIEQLLNVEKQMRLAGDVAGTRKAATDILQLCFDARAWKTLNDQIVVLSKR 60

Query: 1462 RGQLKXXXXXXXXXXXQYIDDTPDIEARVELIKTLNSVSAGKIYVELERARLIKKL 1295
            RGQLK           QYID+TPDIE R+ELIKTLNSVSAGKIYVE+ERARLIKKL
Sbjct: 61   RGQLKQAVTAMVQQAMQYIDETPDIETRIELIKTLNSVSAGKIYVEIERARLIKKL 116


>ref|XP_003531394.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 12-like
            [Glycine max]
          Length = 441

 Score =  549 bits (1415), Expect(2) = 0.0
 Identities = 270/313 (86%), Positives = 295/313 (94%)
 Frame = -2

Query: 1224 ADTSKEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEK 1045
            AD  +EIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD SKEK
Sbjct: 130  ADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADLSKEK 189

Query: 1044 KKPKEGDNVVEEAPADIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKAIYDISSVKED 865
            KKPKEGDNVVEEAPADIPSLLELK+IYYELMIRYYSHNNDYLEICRCYKAIY+I SVKED
Sbjct: 190  KKPKEGDNVVEEAPADIPSLLELKQIYYELMIRYYSHNNDYLEICRCYKAIYEIPSVKED 249

Query: 864  PTKWVPVLRKICWYLVLAPHDPMQSSLLNSTLEDKNLSEIPNFGELLKQLVTMEVIQWTA 685
            P KW+P+LRKICWYLVLAP+DPMQSS LNSTL DKNLSEIPNF  LLKQLVTMEVIQWT 
Sbjct: 250  PAKWIPILRKICWYLVLAPYDPMQSSFLNSTLADKNLSEIPNFKLLLKQLVTMEVIQWTT 309

Query: 684  LWETCQNEFENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYARLTLQRLAKLLCLTI 505
            LW+T +++FENEK   G SLG+KAAEDLRQRIIEHNILVVSKYYAR+TL+RLA+LLCL++
Sbjct: 310  LWDTYKSDFENEK-ASGKSLGEKAAEDLRQRIIEHNILVVSKYYARITLKRLAELLCLSV 368

Query: 504  EETEKHLSDMVVSKSLVAKVDRPMGTVCFQTAKDSNEVLNSWAMNLERLLDLVEKSCHQI 325
            ++ EKHLSDMVVSK+LVAK+DRP+G VCFQTAKDSN++LNSWA NLE+LLDLVEKSCHQI
Sbjct: 369  QDAEKHLSDMVVSKALVAKIDRPLGIVCFQTAKDSNDILNSWAANLEKLLDLVEKSCHQI 428

Query: 324  HKETMIHKAALKV 286
            HKETM+HKAALKV
Sbjct: 429  HKETMVHKAALKV 441



 Score =  155 bits (392), Expect(2) = 0.0
 Identities = 81/116 (69%), Positives = 92/116 (79%)
 Frame = -1

Query: 1642 MEGGDNLDAQIESLLNVEKQSRLAENVSATKKAVIDIIQLCYGARAWKTLNEQILILSKR 1463
            M    NLDA IE LLNVEKQ RLA +V+ T+KA  DI+QLC+ ARAWKTLN+QI++LSKR
Sbjct: 1    MANTGNLDAAIEQLLNVEKQMRLAGDVAGTRKAATDILQLCFDARAWKTLNDQIVVLSKR 60

Query: 1462 RGQLKXXXXXXXXXXXQYIDDTPDIEARVELIKTLNSVSAGKIYVELERARLIKKL 1295
            RGQLK           QYID+TPDIE R+ELIKTLNSVSAGKIYVE+ERARLIKKL
Sbjct: 61   RGQLKQAVTAMVQQAMQYIDETPDIETRIELIKTLNSVSAGKIYVEIERARLIKKL 116


>ref|XP_002310051.1| predicted protein [Populus trichocarpa] gi|222852954|gb|EEE90501.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  558 bits (1438), Expect(2) = 0.0
 Identities = 273/313 (87%), Positives = 297/313 (94%)
 Frame = -2

Query: 1224 ADTSKEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEK 1045
            AD  +E+AVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEK
Sbjct: 130  ADLMQEVAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEK 189

Query: 1044 KKPKEGDNVVEEAPADIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKAIYDISSVKED 865
            KKPKEGDNVVEEAPADIPSLLELKRIYYELMIRYYSH+NDYLEICRCYKAIY+I  VKE+
Sbjct: 190  KKPKEGDNVVEEAPADIPSLLELKRIYYELMIRYYSHDNDYLEICRCYKAIYEIPPVKEN 249

Query: 864  PTKWVPVLRKICWYLVLAPHDPMQSSLLNSTLEDKNLSEIPNFGELLKQLVTMEVIQWTA 685
            P +W+PVLRKICWYLVLAPHDPMQSSLLNSTLEDKNLSEI NF  LLKQLVTMEVIQWT+
Sbjct: 250  PAQWIPVLRKICWYLVLAPHDPMQSSLLNSTLEDKNLSEISNFKLLLKQLVTMEVIQWTS 309

Query: 684  LWETCQNEFENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYARLTLQRLAKLLCLTI 505
            LW    +EFENEKN+LGGSLGDKAAEDL+QRIIEHNILVVSKYY+R+T++RLA+LLCL+I
Sbjct: 310  LWNAFMDEFENEKNLLGGSLGDKAAEDLKQRIIEHNILVVSKYYSRITVKRLAELLCLSI 369

Query: 504  EETEKHLSDMVVSKSLVAKVDRPMGTVCFQTAKDSNEVLNSWAMNLERLLDLVEKSCHQI 325
            +E EKHLSDMVVSK+LVAK+DRPMG V FQ AKDSN++LNSWAMNLE+LLDLVEKSCHQI
Sbjct: 370  QEAEKHLSDMVVSKALVAKIDRPMGIVSFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQI 429

Query: 324  HKETMIHKAALKV 286
            HKETM+HKAALKV
Sbjct: 430  HKETMVHKAALKV 442



 Score =  143 bits (360), Expect(2) = 0.0
 Identities = 74/116 (63%), Positives = 91/116 (78%)
 Frame = -1

Query: 1642 MEGGDNLDAQIESLLNVEKQSRLAENVSATKKAVIDIIQLCYGARAWKTLNEQILILSKR 1463
            MEG  NL+A IE L NVEKQ RLA +V+ TKKAV +I+QLC+ A+ WK LN+QI++LSK+
Sbjct: 1    MEGKANLEAAIEQLQNVEKQMRLAGDVAGTKKAVTEILQLCFEAKDWKALNDQIILLSKK 60

Query: 1462 RGQLKXXXXXXXXXXXQYIDDTPDIEARVELIKTLNSVSAGKIYVELERARLIKKL 1295
            RGQLK           QYID+T D++ R+ELIKTLNSVSAGKIYVE+ERARLI+KL
Sbjct: 61   RGQLKQAVTAMVQQAMQYIDETLDLDTRIELIKTLNSVSAGKIYVEIERARLIRKL 116