BLASTX nr result

ID: Coptis24_contig00004226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004226
         (1483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271381.1| PREDICTED: uncharacterized protein LOC100252...   277   4e-72
ref|XP_003549465.1| PREDICTED: uncharacterized protein LOC100786...   251   4e-64
ref|XP_003555739.1| PREDICTED: uncharacterized protein LOC100776...   247   6e-63
ref|XP_002329632.1| predicted protein [Populus trichocarpa] gi|2...   233   1e-58
ref|XP_003610128.1| Syntaxin family protein [Medicago truncatula...   230   6e-58

>ref|XP_002271381.1| PREDICTED: uncharacterized protein LOC100252969 [Vitis vinifera]
          Length = 336

 Score =  277 bits (709), Expect = 4e-72
 Identities = 161/329 (48%), Positives = 215/329 (65%), Gaps = 1/329 (0%)
 Frame = -3

Query: 1175 MLVANNNSFDLWQKDVFFSAAEEVQQSVDIMESMYRMWLRGGREGQELDYSVDLRGELQM 996
            M+VAN  SFDLWQKD FFSAAEEVQ+S DIMES YR W+R  REG   +   +L  EL+ 
Sbjct: 1    MMVAN--SFDLWQKDAFFSAAEEVQESADIMESAYRTWVRERREGLTHEDLDELYRELKT 58

Query: 995  ALGTAKWQLEEFERAVRLSHGYRSQDNTTNRHRQFVDAMEDQISRVEKALRESLNQE-KQ 819
            ALGTAKWQLEEFERAVRLSH  R  DNTT RHRQF+ A+E+QIS VE+ALRES N+E KQ
Sbjct: 59   ALGTAKWQLEEFERAVRLSHRQRCDDNTTARHRQFIAAIENQISHVEEALRESFNEEGKQ 118

Query: 818  SLQWVHLDEDERDDLAAFLXXXXXXXXXXSNRSLELGPSNYSFFPGNEMKRQDFNIDNDA 639
              QWV+LD++ERDDLA FL              +ELG S       N  KR++ + + +A
Sbjct: 119  PPQWVNLDQEERDDLALFLSGTSGTLQNAKEEHVELGHSMKGSPRENHYKRKETDFNLNA 178

Query: 638  FPNGDMSNCVNSYKEVVTINKDSKYVVELEGKEICRTCIDMDYQAEKLAGQKKTWSSPNF 459
              N DM + +  +K+VVTINKD+ Y++ELE KE   T  D++ QA++  G ++T +SP  
Sbjct: 179  ACNRDMPDEIKGFKDVVTINKDATYIIELEAKEAPGTRDDINCQADRTTGTRRTGNSPP- 237

Query: 458  GSLKIVISDDEDDQKKTLEPTIKSNYKGKRFRSIFWRQKGGENLRTKARVSNCLDLRRVN 279
            GS KIVI+ DED+  K L P+I++  KGK  +++ W+Q+ GE+ + K         R +N
Sbjct: 238  GSWKIVIA-DEDEHSKKLVPSIEATPKGKGSKAVLWKQRWGEHPQAK---------RGIN 287

Query: 278  KFTKLFRQLSGGQIQLQGAQNMQLNRFLQ 192
             F ++F ++ G Q QLQ    +Q +  +Q
Sbjct: 288  WFNQIFGRVGGLQRQLQSPLQLQFSCSVQ 316


>ref|XP_003549465.1| PREDICTED: uncharacterized protein LOC100786246 [Glycine max]
          Length = 329

 Score =  251 bits (640), Expect = 4e-64
 Identities = 137/279 (49%), Positives = 188/279 (67%), Gaps = 1/279 (0%)
 Frame = -3

Query: 1175 MLVANNNSFDLWQKDVFFSAAEEVQQSVDIMESMYRMWLRGGREGQELDYSVDLRGELQM 996
            MLVAN  SFDLW+KD FFSAAEEVQ+S DIMES YR WLR  RE    +   +L  ELQ 
Sbjct: 1    MLVAN--SFDLWRKDGFFSAAEEVQESADIMESAYRAWLREKRERSTPEELNELCRELQT 58

Query: 995  ALGTAKWQLEEFERAVRLSHGYRSQDNTTNRHRQFVDAMEDQISRVEKALRESLNQE-KQ 819
            ALGTAKWQLEEF++AVRLS+ +   DNT+ RHRQF+ A+E QI++VE ALRES  +E KQ
Sbjct: 59   ALGTAKWQLEEFDKAVRLSYRHHGDDNTSTRHRQFISAIESQITQVEAALRESYIEEGKQ 118

Query: 818  SLQWVHLDEDERDDLAAFLXXXXXXXXXXSNRSLELGPSNYSFFPGNEMKRQDFNIDNDA 639
             L+WV+LDE+ERDDLAAFL          ++  +E+           + K++D  +D + 
Sbjct: 119  PLRWVNLDEEERDDLAAFLSGTCQTTQSTNDDCMEV----------KQAKKEDKIVDINT 168

Query: 638  FPNGDMSNCVNSYKEVVTINKDSKYVVELEGKEICRTCIDMDYQAEKLAGQKKTWSSPNF 459
            F N D+S    S K+V+++NKD+ YV+E++   + R+  D+  Q ++    +KTWS PN+
Sbjct: 169  FRNRDISASEKSSKDVISVNKDTDYVIEIKADAVSRSNDDVVSQTDRTTSTRKTWSPPNY 228

Query: 458  GSLKIVISDDEDDQKKTLEPTIKSNYKGKRFRSIFWRQK 342
            G+LKIVI+ DED+Q+     T+ +  K K FR++FW+QK
Sbjct: 229  GALKIVIA-DEDEQRDKPTRTVDATPKEKGFRNLFWKQK 266


>ref|XP_003555739.1| PREDICTED: uncharacterized protein LOC100776721 [Glycine max]
          Length = 329

 Score =  247 bits (630), Expect = 6e-63
 Identities = 136/279 (48%), Positives = 186/279 (66%), Gaps = 1/279 (0%)
 Frame = -3

Query: 1175 MLVANNNSFDLWQKDVFFSAAEEVQQSVDIMESMYRMWLRGGREGQELDYSVDLRGELQM 996
            MLVAN  SFDLW+KD FFSAAEEVQ+S DIMES YR WLR  RE    +   +L  ELQ 
Sbjct: 1    MLVAN--SFDLWRKDAFFSAAEEVQESADIMESAYRAWLREKRERSTPEELNELCRELQT 58

Query: 995  ALGTAKWQLEEFERAVRLSHGYRSQDNTTNRHRQFVDAMEDQISRVEKALRESLNQE-KQ 819
            ALGTAKWQLEEF++AVRLS+   S DNT+ RHRQF+ A+E QI++VE ALRES  +E KQ
Sbjct: 59   ALGTAKWQLEEFDKAVRLSYRPHSDDNTSTRHRQFISAIESQITQVEAALRESYIEEGKQ 118

Query: 818  SLQWVHLDEDERDDLAAFLXXXXXXXXXXSNRSLELGPSNYSFFPGNEMKRQDFNIDNDA 639
             L+WV+LDE+ERDDLAAFL          ++  +E+           + K++D  +D   
Sbjct: 119  PLRWVNLDEEERDDLAAFLSGTCQTTQSTNDEYMEV----------KQAKKEDKIVDIYT 168

Query: 638  FPNGDMSNCVNSYKEVVTINKDSKYVVELEGKEICRTCIDMDYQAEKLAGQKKTWSSPNF 459
            F N D+S    S K+V+++NKD+ Y++E++   + R+  D+  Q ++    +KTWS PN+
Sbjct: 169  FRNRDISASEKSSKDVISVNKDTDYLIEIKADAVSRSNDDLVSQTDRTTSTRKTWSPPNY 228

Query: 458  GSLKIVISDDEDDQKKTLEPTIKSNYKGKRFRSIFWRQK 342
            G+LKIVI+ DE +Q+     T+ +  K K FR++FW+QK
Sbjct: 229  GALKIVIA-DEGEQRDKPTRTVDATPKEKGFRNLFWKQK 266


>ref|XP_002329632.1| predicted protein [Populus trichocarpa] gi|222870513|gb|EEF07644.1|
            predicted protein [Populus trichocarpa]
          Length = 290

 Score =  233 bits (593), Expect = 1e-58
 Identities = 134/292 (45%), Positives = 186/292 (63%), Gaps = 2/292 (0%)
 Frame = -3

Query: 1175 MLVANNNSFDLWQKDVFFSAAEEVQQSVDIMESMYRMWLRGGREGQELDYSVDLRGELQM 996
            M+VAN  SFDLWQKD FFSAAEEVQ+S D+MES YRMW R  REG + +    L  ELQ 
Sbjct: 1    MMVAN--SFDLWQKDAFFSAAEEVQESADVMESAYRMWTREKREGSKPEDLDQLSRELQT 58

Query: 995  ALGTAKWQLEEFERAVRLSHGYRSQDNTTNRHRQFVDAMEDQISRVEKALRESLNQE-KQ 819
            ALGTAKWQLEEFERAV+LSHG+ S D T +RH+QFV A+E QIS VE ALRE+ + E KQ
Sbjct: 59   ALGTAKWQLEEFERAVQLSHGHCSDDFTASRHKQFVTAIESQISLVEAALREAFSGEGKQ 118

Query: 818  SLQWVHLDEDERDDLAAFLXXXXXXXXXXSNRSLELGPSNYSFFPG-NEMKRQDFNIDND 642
              +WV+LD++E DDLA FL           +       S     PG N  KR+   +D++
Sbjct: 119  PFRWVNLDKEECDDLAMFLSGTIQIPENVKD-DCTTAKSPMKGSPGENPHKRK--KVDHN 175

Query: 641  AFPNGDMSNCVNSYKEVVTINKDSKYVVELEGKEICRTCIDMDYQAEKLAGQKKTWSSPN 462
            + P    S   +   E +T NK+ +++++++ KE      D+  Q +K  G ++TWSSPN
Sbjct: 176  SGPT--CSRGTSDENEFITDNKNGEFIIDIQEKENLGMRDDIISQVDKTTGSRRTWSSPN 233

Query: 461  FGSLKIVISDDEDDQKKTLEPTIKSNYKGKRFRSIFWRQKGGENLRTKARVS 306
            FGS+K V+S D D Q+  ++ ++++  K K +  IFW+++ GE+ R K  ++
Sbjct: 234  FGSMKFVVSRD-DKQRDKMKSSVEATPKEKGYEPIFWKRRCGEHSRAKGSIT 284


>ref|XP_003610128.1| Syntaxin family protein [Medicago truncatula]
            gi|355511183|gb|AES92325.1| Syntaxin family protein
            [Medicago truncatula]
          Length = 340

 Score =  230 bits (587), Expect = 6e-58
 Identities = 138/332 (41%), Positives = 196/332 (59%), Gaps = 4/332 (1%)
 Frame = -3

Query: 1175 MLVANNNSFDLWQKDVFFSAAEEVQQSVDIMESMYRMWLRGGREGQELDYSVDLRGELQM 996
            MLVAN  SFDLW+KD FFSAAEEVQ+S DIMES YR WLR  RE    +   +L  ELQ 
Sbjct: 1    MLVAN--SFDLWRKDAFFSAAEEVQESADIMESAYRAWLRERRERSNPEELNELCRELQT 58

Query: 995  ALGTAKWQLEEFERAVRLSHGYRSQDNTTNRHRQFVDAMEDQISRVEKALRES-LNQEKQ 819
            ALGTAKWQLEE E+A+RLS+ +   DN   RHRQF+ A+E QIS+VE  LRES + + KQ
Sbjct: 59   ALGTAKWQLEELEKAIRLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEEGKQ 118

Query: 818  SLQWVHLDEDERDDLAAFLXXXXXXXXXXSNRSLELGPSNYSFFPGNEMKRQD--FNIDN 645
             L+WV+LDE+ERDD AAFL           +  +++ P   S     ++ ++D   N++ 
Sbjct: 119  PLRWVNLDEEERDDFAAFLSGTCETVQSTKDECVDVSPLMKSSIREKQVSKEDENVNVNV 178

Query: 644  DAFPNGDMSNCVNSYKEVVTINKDSKYVVELEGKEICRTCIDMDYQAEKLAGQKKTWS-S 468
            +AF   D S    +  + V +NKD  Y +E++     R   D+ YQ +     +KTWS  
Sbjct: 179  NAFYRWDGSTNEKASVDAVAVNKDRDYAIEIKADADSRNSDDVVYQTDTTTSTRKTWSPP 238

Query: 467  PNFGSLKIVISDDEDDQKKTLEPTIKSNYKGKRFRSIFWRQKGGENLRTKARVSNCLDLR 288
            PN+ +L+IVI+ DED+Q   L  T+ +  K K  + +FW+QK  E  +          +R
Sbjct: 239  PNYAALRIVIA-DEDEQGNQLTRTVDATPKEKGSKPLFWKQKFEEYPQA---------MR 288

Query: 287  RVNKFTKLFRQLSGGQIQLQGAQNMQLNRFLQ 192
             V+ F ++F ++   Q QL+   +++  R L+
Sbjct: 289  AVHMFNQVFGRIGLCQRQLRSPLHLRHGRSLK 320


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