BLASTX nr result

ID: Coptis24_contig00004200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004200
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31940.3| unnamed protein product [Vitis vinifera]              162   7e-38
ref|XP_002272133.1| PREDICTED: uncharacterized protein LOC100262...   162   9e-38
ref|XP_003518011.1| PREDICTED: uncharacterized protein LOC100801...   148   1e-33
ref|XP_002315042.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
ref|NP_001237720.1| uncharacterized protein LOC100500672 [Glycin...   146   5e-33

>emb|CBI31940.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  162 bits (410), Expect = 7e-38
 Identities = 86/129 (66%), Positives = 96/129 (74%)
 Frame = +3

Query: 75  QRQKMLGTNAEDAKEQELAKTSPDVQVDGDFSKDDQKDVEIKEESSMPSAAQEEEAILKK 254
           Q   M GT+ ED KEQ+L       QVD D   +D K ++  EE+ MPS  QEEE ++KK
Sbjct: 112 QGTPMSGTDIEDVKEQDLNDGILKDQVDSDLHAEDSKHLDENEENPMPSTQQEEE-VIKK 170

Query: 255 KYGGMLPKKPPLISKDHERAFFDSADWALGKQGAGAPIEKPKGPLEALRPKLQPTRNNQS 434
           KYGG+LPKKPPLISKDHERAFFDSADWALGKQGA     KPKGPLEALRPKLQPT + Q 
Sbjct: 171 KYGGILPKKPPLISKDHERAFFDSADWALGKQGA-----KPKGPLEALRPKLQPTPHQQV 225

Query: 435 RSRRSAYAP 461
           RSRRSAYAP
Sbjct: 226 RSRRSAYAP 234


>ref|XP_002272133.1| PREDICTED: uncharacterized protein LOC100262011 isoform 1 [Vitis
           vinifera] gi|359473296|ref|XP_003631285.1| PREDICTED:
           uncharacterized protein LOC100262011 isoform 2 [Vitis
           vinifera]
          Length = 158

 Score =  162 bits (409), Expect = 9e-38
 Identities = 85/125 (68%), Positives = 95/125 (76%)
 Frame = +3

Query: 87  MLGTNAEDAKEQELAKTSPDVQVDGDFSKDDQKDVEIKEESSMPSAAQEEEAILKKKYGG 266
           M GT+ ED KEQ+L       QVD D   +D K ++  EE+ MPS  QEEE ++KKKYGG
Sbjct: 1   MSGTDIEDVKEQDLNDGILKDQVDSDLHAEDSKHLDENEENPMPSTQQEEE-VIKKKYGG 59

Query: 267 MLPKKPPLISKDHERAFFDSADWALGKQGAGAPIEKPKGPLEALRPKLQPTRNNQSRSRR 446
           +LPKKPPLISKDHERAFFDSADWALGKQGA     KPKGPLEALRPKLQPT + Q RSRR
Sbjct: 60  ILPKKPPLISKDHERAFFDSADWALGKQGA-----KPKGPLEALRPKLQPTPHQQVRSRR 114

Query: 447 SAYAP 461
           SAYAP
Sbjct: 115 SAYAP 119


>ref|XP_003518011.1| PREDICTED: uncharacterized protein LOC100801094 [Glycine max]
          Length = 160

 Score =  148 bits (374), Expect = 1e-33
 Identities = 78/118 (66%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
 Frame = +3

Query: 114 KEQELAKTSPDVQVDGDFSKDDQKDVEIKEESSMPS-AAQEEEAILKKKYGGMLPKKPPL 290
           KE+E+   SP  +VD + S DD KD +  +    P  ++Q+EEA +KKKYGGMLPKKPPL
Sbjct: 11  KEEEVGDDSPRNEVDSEKSADDLKDSDNDKSDGNPMPSSQQEEAAVKKKYGGMLPKKPPL 70

Query: 291 ISKDHERAFFDSADWALGKQGAGAPIEKPKGPLEALRPKLQPTRNNQSRSRRSAYAPA 464
           ISKDHERA+FDSADWALGKQGA    +KPKGPLEALRPKLQPT+ + +RSRRSAYAPA
Sbjct: 71  ISKDHERAYFDSADWALGKQGA----QKPKGPLEALRPKLQPTQQH-ARSRRSAYAPA 123


>ref|XP_002315042.1| predicted protein [Populus trichocarpa] gi|222864082|gb|EEF01213.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  147 bits (371), Expect = 2e-33
 Identities = 81/126 (64%), Positives = 93/126 (73%)
 Frame = +3

Query: 87  MLGTNAEDAKEQELAKTSPDVQVDGDFSKDDQKDVEIKEESSMPSAAQEEEAILKKKYGG 266
           M   + ED KEQE +  + +  V+ D    DQK+++   E+ M S  QEEE I+KKKYGG
Sbjct: 1   MSSKSIEDVKEQEFSNDAAENPVEND---GDQKELDQNGENPMLSPEQEEE-IIKKKYGG 56

Query: 267 MLPKKPPLISKDHERAFFDSADWALGKQGAGAPIEKPKGPLEALRPKLQPTRNNQSRSRR 446
           ML KK PLISKDHERAFFDSADWALGKQGA    +KPKGPLEALRPKLQPT  +Q RSRR
Sbjct: 57  MLSKKKPLISKDHERAFFDSADWALGKQGA----QKPKGPLEALRPKLQPTPQHQMRSRR 112

Query: 447 SAYAPA 464
           SAYAPA
Sbjct: 113 SAYAPA 118


>ref|NP_001237720.1| uncharacterized protein LOC100500672 [Glycine max]
           gi|255630899|gb|ACU15812.1| unknown [Glycine max]
          Length = 160

 Score =  146 bits (368), Expect = 5e-33
 Identities = 80/119 (67%), Positives = 94/119 (78%), Gaps = 2/119 (1%)
 Frame = +3

Query: 114 KEQELAKTSPDVQVDGDFSKDDQKDVEIKEES--SMPSAAQEEEAILKKKYGGMLPKKPP 287
           KE+E+A  SP  +VD   S DD KD +  +    +MPS+ QEE A+ KKKYGG+LPKKPP
Sbjct: 11  KEEEVADDSPKNEVDSGKSVDDLKDSDNDKSDGDAMPSSHQEEAAV-KKKYGGVLPKKPP 69

Query: 288 LISKDHERAFFDSADWALGKQGAGAPIEKPKGPLEALRPKLQPTRNNQSRSRRSAYAPA 464
           LISKDHERA+FDSADWALGKQGA    +KPKGPLEALRPKLQPT+ + +RSRRSAYAPA
Sbjct: 70  LISKDHERAYFDSADWALGKQGA----QKPKGPLEALRPKLQPTQQH-ARSRRSAYAPA 123


Top