BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004196
         (1568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281757.2| PREDICTED: two-component response regulator-...   466   e-129
gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]   441   e-121
emb|CBI15189.3| unnamed protein product [Vitis vinifera]              431   e-118
ref|XP_002514725.1| sensory transduction histidine kinase, putat...   427   e-117
ref|XP_002330130.1| pseudo response regulator [Populus trichocar...   421   e-115

>ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
            vinifera]
          Length = 556

 Score =  466 bits (1199), Expect = e-129
 Identities = 254/439 (57%), Positives = 306/439 (69%), Gaps = 14/439 (3%)
 Frame = +3

Query: 3    LRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKI 182
            LRRIPIIMMSAQDEVSVVVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR+MLGL+EK I
Sbjct: 100  LRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNI 159

Query: 183  LNYDFDMVASDPSDANTNSTTVFSDDTDEKFRRSTILENSILXXXXXXXXXXXXXXXXLN 362
            LNYDFD+ ASDPSDANTNST +FSDDTD+K R S   E  +                  +
Sbjct: 160  LNYDFDVAASDPSDANTNST-MFSDDTDDKSRMSANPEMVVSVHQEDEVSLSNATIDSTD 218

Query: 363  RPSEYYPDVLRPIQ-----------QTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKR 509
              +E  P V+  ++           +T Q+ S PKKS LK+GESSAF TYVKSS+  +  
Sbjct: 219  VAAE--PPVVNQLECRPDVPGISDRRTGQLLSGPKKSELKVGESSAFFTYVKSSMIKTNS 276

Query: 510  QRIVCIDETAAQAECATKEETLARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGT 689
            Q I  I+E+A Q   +  EE +  W      + Q++ + E  ENY +G+ +PSS +IP +
Sbjct: 277  QGIPNINESAPQH--SRMEERVQAWSEKGVNDTQEHENGEAWENYSQGDDFPSSNSIPDS 334

Query: 690  TYTEKSCAPVS-LEFRQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQ 866
               E SC P + +EF Q RNSK E  S V +HP NE QV+I G P  T+ PY M G+MNQ
Sbjct: 335  LSVEMSCTPPAPIEFVQGRNSKGEEFSQVPIHPRNEHQVDISGFPGHTAYPYCMSGVMNQ 394

Query: 867  VMMPSSVQMSQGHQHDFGKHAST--MLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQM 1040
            VMMPSS Q+     HD   +A+T  MLPQYN LPQC  HVP + SFPYYPVS+C+Q GQM
Sbjct: 395  VMMPSSAQLYPKSLHDMQNNATTSAMLPQYNHLPQCPPHVPGVASFPYYPVSICLQPGQM 454

Query: 1041 PATHHWHPNASFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRV 1220
              TH W    + +ST+VK  + +RREAALIKFRQKRK+RCFDKKIRY+NRKRLAERRPRV
Sbjct: 455  STTHPWPSYGNSSSTEVKLGKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRV 514

Query: 1221 RGQFVRQMNGVDVDLNGQP 1277
            RGQFVR+MNGV+VDLNG+P
Sbjct: 515  RGQFVRKMNGVNVDLNGRP 533


>gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
          Length = 545

 Score =  441 bits (1135), Expect = e-121
 Identities = 241/430 (56%), Positives = 298/430 (69%), Gaps = 5/430 (1%)
 Frame = +3

Query: 3    LRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKI 182
            LRRIP+IMMSAQDEVSVVVKCL+LGAADYLVKPLRTNELLNLWTH+WRRR+MLGL+EK I
Sbjct: 105  LRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHVWRRRRMLGLAEKNI 164

Query: 183  LNYDFDMVASDPSDANTNSTTVFSDDTDEKFRRSTILENSILXXXXXXXXXXXXXXXXLN 362
            LNYDFD+VASDPSDANTNSTT+FSDDTD++  RST  E  +                 + 
Sbjct: 165  LNYDFDLVASDPSDANTNSTTLFSDDTDDRSCRSTNPEMGLSVHEEDESAGAAVEPPYIE 224

Query: 363  RPSEYYPDVLR-PIQQTAQVSSCPKKSALKIGE-SSAFLTYVKSSITPSKRQRIVCIDET 536
               EY PDV +   ++T Q SS PKKS LKIGE SSAF TYVK+S        +  ++E 
Sbjct: 225  L-DEYRPDVPKISDRRTGQFSSGPKKSELKIGESSSAFFTYVKTSTLQKSSPGVANVEEN 283

Query: 537  AAQAECATKEET-LARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGTTYTEKSCA 713
             AQ       +  + +  N P  N     S EV E+Y +G+ +PSS ++P +   E+S  
Sbjct: 284  VAQVRMGENHQACVQQVVNDPQIN----DSGEVWESYSQGDEFPSSNSMPDSFSIERSST 339

Query: 714  P-VSLEFRQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSSVQ 890
            P  S+E  Q R+ K E  S VL HP NE Q++  GLP+ T+ PY M G++NQVMMPS+ Q
Sbjct: 340  PSASMELPQQRDLKDERFSQVLSHPRNEHQLDASGLPAQTAFPYCMSGVVNQVMMPSAAQ 399

Query: 891  MSQGHQHDFGKHA-STMLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHWHPN 1067
            +   + HD   H+   M+ QY+ LPQC  HV  M  FPYYPV++C+Q GQM A+H W P 
Sbjct: 400  LYHKNLHDLQNHSPKAMMSQYHHLPQCPPHVNGMAPFPYYPVNICLQPGQMSASHSW-PF 458

Query: 1068 ASFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVRQMN 1247
             S +S++V   + +RREAALIKFRQKRK+RCFDKKIRY+NRKRLAERRPRVRGQFVR++N
Sbjct: 459  GSPSSSEVNLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 518

Query: 1248 GVDVDLNGQP 1277
            GV+VDLNG P
Sbjct: 519  GVNVDLNGHP 528


>emb|CBI15189.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score =  431 bits (1108), Expect = e-118
 Identities = 242/433 (55%), Positives = 286/433 (66%), Gaps = 8/433 (1%)
 Frame = +3

Query: 3    LRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKI 182
            LRRIPIIMMSAQDEVSVVVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR+MLGL+EK I
Sbjct: 98   LRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNI 157

Query: 183  LNYDFDMVASDPSDANTNSTTVFSDDTDEKFRRSTILENSILXXXXXXXXXXXXXXXXLN 362
            LNYDFD+ ASDPSDANTNST +FSDDTD+K R S   E  +                   
Sbjct: 158  LNYDFDVAASDPSDANTNST-MFSDDTDDKSRMSANPEMVVSVHQEDESNATIDSTDVAA 216

Query: 363  RPS-----EYYPDVLR-PIQQTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKRQRIVC 524
             P      E  PDV     ++T Q+ S PKKS LK+GESSAF TYVKSS+  +  Q I  
Sbjct: 217  EPPVVNQLECRPDVPGISDRRTGQLLSGPKKSELKVGESSAFFTYVKSSMIKTNSQGIPN 276

Query: 525  IDETAAQAECATKEETLARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGTTYTEK 704
            I+E+A Q   +  EE +  W      + Q++ + E  ENY +G+ +PS E          
Sbjct: 277  INESAPQH--SRMEERVQAWSEKGVNDTQEHENGEAWENYSQGDDFPSKEF--------- 325

Query: 705  SCAPVSLEFRQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSS 884
                                S V +HP NE QV+I G P  T+ PY M G+MNQVMMPSS
Sbjct: 326  --------------------SQVPIHPRNEHQVDISGFPGHTAYPYCMSGVMNQVMMPSS 365

Query: 885  VQMSQGHQHDFGKHAST--MLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHW 1058
             Q+     HD   +A+T  MLPQYN LPQC  HVP + SFPYYPVS+C+Q GQM  TH W
Sbjct: 366  AQLYPKSLHDMQNNATTSAMLPQYNHLPQCPPHVPGVASFPYYPVSICLQPGQMSTTHPW 425

Query: 1059 HPNASFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVR 1238
                + +ST+VK  + +RREAALIKFRQKRK+RCFDKKIRY+NRKRLAERRPRVRGQFVR
Sbjct: 426  PSYGNSSSTEVKLGKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 485

Query: 1239 QMNGVDVDLNGQP 1277
            +MNGV+VDLNG+P
Sbjct: 486  KMNGVNVDLNGRP 498


>ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
            gi|223546329|gb|EEF47831.1| sensory transduction
            histidine kinase, putative [Ricinus communis]
          Length = 550

 Score =  427 bits (1098), Expect = e-117
 Identities = 239/431 (55%), Positives = 294/431 (68%), Gaps = 6/431 (1%)
 Frame = +3

Query: 3    LRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKI 182
            LRRIP+IMMSAQDEVS+VVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR+MLGL+EK I
Sbjct: 95   LRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNI 154

Query: 183  LNYDFDMVASDPSDANTNSTTVFSDDTDEKFRRSTILENSILXXXXXXXXXXXXXXXXLN 362
            L YDFD+VASDPSDANTNSTT+FSDDTD+K R+    E  +                   
Sbjct: 155  LIYDFDLVASDPSDANTNSTTLFSDDTDDKSRKCLNPEIGVSTHQEDVVNRGSGTAADEP 214

Query: 363  RPS---EYYPDVLR-PIQQTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKRQRIVCID 530
             P    EY PDV     ++TAQ+SS PKKS LKIGESSAF TYVKSS   +  Q     +
Sbjct: 215  PPCNRLEYRPDVPGISDRRTAQLSSGPKKSELKIGESSAFFTYVKSSTIKNDSQGFPTTE 274

Query: 531  ETAAQAECATKEETLARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGTTYTEKSC 710
            +    +  A  EE L         + Q + + E  ++Y + + + SS +IP +   E+SC
Sbjct: 275  DYTVPSLRA--EENLQACAQQVVNDAQLHENRETWQSYPQ-DDFRSSSSIPDSISLERSC 331

Query: 711  AP-VSLEFRQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSSV 887
             P +S EF Q RN K +    V  +P NE Q++  GL + +  PYYM G++NQV+MP S 
Sbjct: 332  TPPMSSEFPQ-RNFKDDKLPQVFTNPINELQLDTSGLSTQSMYPYYMSGVVNQVIMPPSA 390

Query: 888  QMSQGHQHDFGKHA-STMLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHWHP 1064
            Q+ Q + H+   +A S MLPQYN L QCS HV  M SFPYYPV++C+Q GQMP TH W  
Sbjct: 391  QLYQKNLHELQNNAPSPMLPQYNHLSQCSPHVASMASFPYYPVNLCLQPGQMPPTHPWPS 450

Query: 1065 NASFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVRQM 1244
                +S  VK  + +RREAAL+KFRQKRK+RCFDKKIRY+NRK+LAERRPRVRGQFVR++
Sbjct: 451  FGGSSSPDVKIKKLDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKL 510

Query: 1245 NGVDVDLNGQP 1277
            NGV+VDLNGQP
Sbjct: 511  NGVNVDLNGQP 521


>ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
            gi|222871264|gb|EEF08395.1| pseudo response regulator
            [Populus trichocarpa]
          Length = 541

 Score =  421 bits (1083), Expect = e-115
 Identities = 237/429 (55%), Positives = 288/429 (67%), Gaps = 4/429 (0%)
 Frame = +3

Query: 3    LRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKI 182
            LRRIP+IMMSAQDEVS+VVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR MLGL+EK I
Sbjct: 98   LRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMLGLAEKNI 157

Query: 183  LNYDFDMVASDPSDANTNSTTVFSDDTDEKFRRSTILENSILXXXXXXXXXXXXXXXXLN 362
            LNYDFD VASDPSDANTNSTT+FSDDTD+  RRST  E  +                   
Sbjct: 158  LNYDFDPVASDPSDANTNSTTLFSDDTDDLSRRSTNPEMGMSTHQEDEPSP--------G 209

Query: 363  RPSEYYPDVLR-PIQQTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKRQRIVCIDETA 539
             P +Y PDV     ++T  +SS PKKS LKIGESSAF TYVK S   +  Q +  I++  
Sbjct: 210  DPQKYRPDVPGISDRRTGHLSSGPKKSELKIGESSAFFTYVKPSTVKNNSQGVALIEDNT 269

Query: 540  AQAECATKEETLARWCNSPGAN-VQQYTSTEVVENYHKGNSYPSSETIPGTTYTEKSCA- 713
             Q     + E   + C     N      + E +E + + + + SS +IP +   E+SC  
Sbjct: 270  NQ---NLRMEEKLQVCGEQMLNDAHLQENGEALEIHSQVDDFRSSSSIPDSLSLERSCTP 326

Query: 714  PVSLEFRQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSSVQM 893
            P+S EF Q RN K +    VLMH +NE Q++   L + +  PY+M G++NQVMM SS Q+
Sbjct: 327  PMSREFPQ-RNFKDDR---VLMHQTNEPQLDASSLSTQSVYPYFMSGVVNQVMMSSSAQL 382

Query: 894  SQGHQHDF-GKHASTMLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHWHPNA 1070
             Q + H+      S MLP YN LPQC  H+  M SFPYYPVS+C+Q GQMP T  W    
Sbjct: 383  YQKNLHELQSLGTSAMLPGYNHLPQCPPHMSGMASFPYYPVSICLQPGQMPTTPSWPSFG 442

Query: 1071 SFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVRQMNG 1250
            S  S  VK ++ +RREAAL KFRQKRK+RCFDKKIRY+NRK+LAERRPRVRGQFVR++NG
Sbjct: 443  SSTSADVKLNKVDRREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNG 502

Query: 1251 VDVDLNGQP 1277
            V+VDLNGQP
Sbjct: 503  VNVDLNGQP 511