BLASTX nr result
ID: Coptis24_contig00004196
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004196 (1568 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281757.2| PREDICTED: two-component response regulator-... 466 e-129 gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa] 441 e-121 emb|CBI15189.3| unnamed protein product [Vitis vinifera] 431 e-118 ref|XP_002514725.1| sensory transduction histidine kinase, putat... 427 e-117 ref|XP_002330130.1| pseudo response regulator [Populus trichocar... 421 e-115 >ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis vinifera] Length = 556 Score = 466 bits (1199), Expect = e-129 Identities = 254/439 (57%), Positives = 306/439 (69%), Gaps = 14/439 (3%) Frame = +3 Query: 3 LRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKI 182 LRRIPIIMMSAQDEVSVVVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR+MLGL+EK I Sbjct: 100 LRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNI 159 Query: 183 LNYDFDMVASDPSDANTNSTTVFSDDTDEKFRRSTILENSILXXXXXXXXXXXXXXXXLN 362 LNYDFD+ ASDPSDANTNST +FSDDTD+K R S E + + Sbjct: 160 LNYDFDVAASDPSDANTNST-MFSDDTDDKSRMSANPEMVVSVHQEDEVSLSNATIDSTD 218 Query: 363 RPSEYYPDVLRPIQ-----------QTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKR 509 +E P V+ ++ +T Q+ S PKKS LK+GESSAF TYVKSS+ + Sbjct: 219 VAAE--PPVVNQLECRPDVPGISDRRTGQLLSGPKKSELKVGESSAFFTYVKSSMIKTNS 276 Query: 510 QRIVCIDETAAQAECATKEETLARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGT 689 Q I I+E+A Q + EE + W + Q++ + E ENY +G+ +PSS +IP + Sbjct: 277 QGIPNINESAPQH--SRMEERVQAWSEKGVNDTQEHENGEAWENYSQGDDFPSSNSIPDS 334 Query: 690 TYTEKSCAPVS-LEFRQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQ 866 E SC P + +EF Q RNSK E S V +HP NE QV+I G P T+ PY M G+MNQ Sbjct: 335 LSVEMSCTPPAPIEFVQGRNSKGEEFSQVPIHPRNEHQVDISGFPGHTAYPYCMSGVMNQ 394 Query: 867 VMMPSSVQMSQGHQHDFGKHAST--MLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQM 1040 VMMPSS Q+ HD +A+T MLPQYN LPQC HVP + SFPYYPVS+C+Q GQM Sbjct: 395 VMMPSSAQLYPKSLHDMQNNATTSAMLPQYNHLPQCPPHVPGVASFPYYPVSICLQPGQM 454 Query: 1041 PATHHWHPNASFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRV 1220 TH W + +ST+VK + +RREAALIKFRQKRK+RCFDKKIRY+NRKRLAERRPRV Sbjct: 455 STTHPWPSYGNSSSTEVKLGKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRV 514 Query: 1221 RGQFVRQMNGVDVDLNGQP 1277 RGQFVR+MNGV+VDLNG+P Sbjct: 515 RGQFVRKMNGVNVDLNGRP 533 >gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa] Length = 545 Score = 441 bits (1135), Expect = e-121 Identities = 241/430 (56%), Positives = 298/430 (69%), Gaps = 5/430 (1%) Frame = +3 Query: 3 LRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKI 182 LRRIP+IMMSAQDEVSVVVKCL+LGAADYLVKPLRTNELLNLWTH+WRRR+MLGL+EK I Sbjct: 105 LRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHVWRRRRMLGLAEKNI 164 Query: 183 LNYDFDMVASDPSDANTNSTTVFSDDTDEKFRRSTILENSILXXXXXXXXXXXXXXXXLN 362 LNYDFD+VASDPSDANTNSTT+FSDDTD++ RST E + + Sbjct: 165 LNYDFDLVASDPSDANTNSTTLFSDDTDDRSCRSTNPEMGLSVHEEDESAGAAVEPPYIE 224 Query: 363 RPSEYYPDVLR-PIQQTAQVSSCPKKSALKIGE-SSAFLTYVKSSITPSKRQRIVCIDET 536 EY PDV + ++T Q SS PKKS LKIGE SSAF TYVK+S + ++E Sbjct: 225 L-DEYRPDVPKISDRRTGQFSSGPKKSELKIGESSSAFFTYVKTSTLQKSSPGVANVEEN 283 Query: 537 AAQAECATKEET-LARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGTTYTEKSCA 713 AQ + + + N P N S EV E+Y +G+ +PSS ++P + E+S Sbjct: 284 VAQVRMGENHQACVQQVVNDPQIN----DSGEVWESYSQGDEFPSSNSMPDSFSIERSST 339 Query: 714 P-VSLEFRQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSSVQ 890 P S+E Q R+ K E S VL HP NE Q++ GLP+ T+ PY M G++NQVMMPS+ Q Sbjct: 340 PSASMELPQQRDLKDERFSQVLSHPRNEHQLDASGLPAQTAFPYCMSGVVNQVMMPSAAQ 399 Query: 891 MSQGHQHDFGKHA-STMLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHWHPN 1067 + + HD H+ M+ QY+ LPQC HV M FPYYPV++C+Q GQM A+H W P Sbjct: 400 LYHKNLHDLQNHSPKAMMSQYHHLPQCPPHVNGMAPFPYYPVNICLQPGQMSASHSW-PF 458 Query: 1068 ASFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVRQMN 1247 S +S++V + +RREAALIKFRQKRK+RCFDKKIRY+NRKRLAERRPRVRGQFVR++N Sbjct: 459 GSPSSSEVNLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 518 Query: 1248 GVDVDLNGQP 1277 GV+VDLNG P Sbjct: 519 GVNVDLNGHP 528 >emb|CBI15189.3| unnamed protein product [Vitis vinifera] Length = 533 Score = 431 bits (1108), Expect = e-118 Identities = 242/433 (55%), Positives = 286/433 (66%), Gaps = 8/433 (1%) Frame = +3 Query: 3 LRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKI 182 LRRIPIIMMSAQDEVSVVVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR+MLGL+EK I Sbjct: 98 LRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNI 157 Query: 183 LNYDFDMVASDPSDANTNSTTVFSDDTDEKFRRSTILENSILXXXXXXXXXXXXXXXXLN 362 LNYDFD+ ASDPSDANTNST +FSDDTD+K R S E + Sbjct: 158 LNYDFDVAASDPSDANTNST-MFSDDTDDKSRMSANPEMVVSVHQEDESNATIDSTDVAA 216 Query: 363 RPS-----EYYPDVLR-PIQQTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKRQRIVC 524 P E PDV ++T Q+ S PKKS LK+GESSAF TYVKSS+ + Q I Sbjct: 217 EPPVVNQLECRPDVPGISDRRTGQLLSGPKKSELKVGESSAFFTYVKSSMIKTNSQGIPN 276 Query: 525 IDETAAQAECATKEETLARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGTTYTEK 704 I+E+A Q + EE + W + Q++ + E ENY +G+ +PS E Sbjct: 277 INESAPQH--SRMEERVQAWSEKGVNDTQEHENGEAWENYSQGDDFPSKEF--------- 325 Query: 705 SCAPVSLEFRQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSS 884 S V +HP NE QV+I G P T+ PY M G+MNQVMMPSS Sbjct: 326 --------------------SQVPIHPRNEHQVDISGFPGHTAYPYCMSGVMNQVMMPSS 365 Query: 885 VQMSQGHQHDFGKHAST--MLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHW 1058 Q+ HD +A+T MLPQYN LPQC HVP + SFPYYPVS+C+Q GQM TH W Sbjct: 366 AQLYPKSLHDMQNNATTSAMLPQYNHLPQCPPHVPGVASFPYYPVSICLQPGQMSTTHPW 425 Query: 1059 HPNASFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVR 1238 + +ST+VK + +RREAALIKFRQKRK+RCFDKKIRY+NRKRLAERRPRVRGQFVR Sbjct: 426 PSYGNSSSTEVKLGKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 485 Query: 1239 QMNGVDVDLNGQP 1277 +MNGV+VDLNG+P Sbjct: 486 KMNGVNVDLNGRP 498 >ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis] gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis] Length = 550 Score = 427 bits (1098), Expect = e-117 Identities = 239/431 (55%), Positives = 294/431 (68%), Gaps = 6/431 (1%) Frame = +3 Query: 3 LRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKI 182 LRRIP+IMMSAQDEVS+VVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR+MLGL+EK I Sbjct: 95 LRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNI 154 Query: 183 LNYDFDMVASDPSDANTNSTTVFSDDTDEKFRRSTILENSILXXXXXXXXXXXXXXXXLN 362 L YDFD+VASDPSDANTNSTT+FSDDTD+K R+ E + Sbjct: 155 LIYDFDLVASDPSDANTNSTTLFSDDTDDKSRKCLNPEIGVSTHQEDVVNRGSGTAADEP 214 Query: 363 RPS---EYYPDVLR-PIQQTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKRQRIVCID 530 P EY PDV ++TAQ+SS PKKS LKIGESSAF TYVKSS + Q + Sbjct: 215 PPCNRLEYRPDVPGISDRRTAQLSSGPKKSELKIGESSAFFTYVKSSTIKNDSQGFPTTE 274 Query: 531 ETAAQAECATKEETLARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGTTYTEKSC 710 + + A EE L + Q + + E ++Y + + + SS +IP + E+SC Sbjct: 275 DYTVPSLRA--EENLQACAQQVVNDAQLHENRETWQSYPQ-DDFRSSSSIPDSISLERSC 331 Query: 711 AP-VSLEFRQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSSV 887 P +S EF Q RN K + V +P NE Q++ GL + + PYYM G++NQV+MP S Sbjct: 332 TPPMSSEFPQ-RNFKDDKLPQVFTNPINELQLDTSGLSTQSMYPYYMSGVVNQVIMPPSA 390 Query: 888 QMSQGHQHDFGKHA-STMLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHWHP 1064 Q+ Q + H+ +A S MLPQYN L QCS HV M SFPYYPV++C+Q GQMP TH W Sbjct: 391 QLYQKNLHELQNNAPSPMLPQYNHLSQCSPHVASMASFPYYPVNLCLQPGQMPPTHPWPS 450 Query: 1065 NASFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVRQM 1244 +S VK + +RREAAL+KFRQKRK+RCFDKKIRY+NRK+LAERRPRVRGQFVR++ Sbjct: 451 FGGSSSPDVKIKKLDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKL 510 Query: 1245 NGVDVDLNGQP 1277 NGV+VDLNGQP Sbjct: 511 NGVNVDLNGQP 521 >ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa] gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa] Length = 541 Score = 421 bits (1083), Expect = e-115 Identities = 237/429 (55%), Positives = 288/429 (67%), Gaps = 4/429 (0%) Frame = +3 Query: 3 LRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKI 182 LRRIP+IMMSAQDEVS+VVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR MLGL+EK I Sbjct: 98 LRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMLGLAEKNI 157 Query: 183 LNYDFDMVASDPSDANTNSTTVFSDDTDEKFRRSTILENSILXXXXXXXXXXXXXXXXLN 362 LNYDFD VASDPSDANTNSTT+FSDDTD+ RRST E + Sbjct: 158 LNYDFDPVASDPSDANTNSTTLFSDDTDDLSRRSTNPEMGMSTHQEDEPSP--------G 209 Query: 363 RPSEYYPDVLR-PIQQTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKRQRIVCIDETA 539 P +Y PDV ++T +SS PKKS LKIGESSAF TYVK S + Q + I++ Sbjct: 210 DPQKYRPDVPGISDRRTGHLSSGPKKSELKIGESSAFFTYVKPSTVKNNSQGVALIEDNT 269 Query: 540 AQAECATKEETLARWCNSPGAN-VQQYTSTEVVENYHKGNSYPSSETIPGTTYTEKSCA- 713 Q + E + C N + E +E + + + + SS +IP + E+SC Sbjct: 270 NQ---NLRMEEKLQVCGEQMLNDAHLQENGEALEIHSQVDDFRSSSSIPDSLSLERSCTP 326 Query: 714 PVSLEFRQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSSVQM 893 P+S EF Q RN K + VLMH +NE Q++ L + + PY+M G++NQVMM SS Q+ Sbjct: 327 PMSREFPQ-RNFKDDR---VLMHQTNEPQLDASSLSTQSVYPYFMSGVVNQVMMSSSAQL 382 Query: 894 SQGHQHDF-GKHASTMLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHWHPNA 1070 Q + H+ S MLP YN LPQC H+ M SFPYYPVS+C+Q GQMP T W Sbjct: 383 YQKNLHELQSLGTSAMLPGYNHLPQCPPHMSGMASFPYYPVSICLQPGQMPTTPSWPSFG 442 Query: 1071 SFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVRQMNG 1250 S S VK ++ +RREAAL KFRQKRK+RCFDKKIRY+NRK+LAERRPRVRGQFVR++NG Sbjct: 443 SSTSADVKLNKVDRREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNG 502 Query: 1251 VDVDLNGQP 1277 V+VDLNGQP Sbjct: 503 VNVDLNGQP 511