BLASTX nr result

ID: Coptis24_contig00004195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004195
         (1753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284953.1| PREDICTED: probable N-acetyl-gamma-glutamyl-...   634   e-179
ref|XP_004145353.1| PREDICTED: probable N-acetyl-gamma-glutamyl-...   587   e-165
gb|ABK24282.1| unknown [Picea sitchensis]                             585   e-164
emb|CAN73785.1| hypothetical protein VITISV_023769 [Vitis vinifera]   582   e-163
ref|XP_002330272.1| predicted protein [Populus trichocarpa] gi|2...   579   e-163

>ref|XP_002284953.1| PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase,
            chloroplastic [Vitis vinifera]
            gi|297741338|emb|CBI32469.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  634 bits (1635), Expect = e-179
 Identities = 315/403 (78%), Positives = 355/403 (88%), Gaps = 8/403 (1%)
 Frame = +1

Query: 187  MNFTGLGSVSLEQRCFLKNEVRLFKDRNASGCSLFVRGASGK-------LEMKAE-SDKL 342
            M+   L S+  ++  F K+E +     +++G  L +RG+           E KAE S K 
Sbjct: 1    MSSAHLSSIRFDREWFRKSETK-----SSNGRKLHIRGSVTSSPQSVQFAEAKAEKSGKA 55

Query: 343  VRIGVLGASGYTGSEIVRLLANHPHFGISVMTADRKAGQSIGSVFPHLIRQNLPDMVAIK 522
            VRIGVLGASGYTGSEIVRLLANHPHFGI++MTADRKAGQSIGSVFPHLI Q+LPDMVAIK
Sbjct: 56   VRIGVLGASGYTGSEIVRLLANHPHFGITLMTADRKAGQSIGSVFPHLITQDLPDMVAIK 115

Query: 523  DADFSNVDAVFCCLPHGTTQEIIKALPKRLKIVDLSADFRLRSVDEYEEWYGQPHRAPDL 702
            DA FSNVDAVFCCLPHGTTQ+IIKALPK LKIVDLSADFRL+ + EYEEWYGQPHRAPDL
Sbjct: 116  DAKFSNVDAVFCCLPHGTTQDIIKALPKSLKIVDLSADFRLQEIAEYEEWYGQPHRAPDL 175

Query: 703  QKEALYGLTEVLRDEIRNARLVANPGCYPTSIQIPLVPLIKANLIDLRNIIIDAKSGVSG 882
            QKEA+YGLTE+LR+EI+ ARLVANPGCYPT+IQ+PLVPL+KANLI+ RN+IIDAKSGVSG
Sbjct: 176  QKEAVYGLTEILREEIKAARLVANPGCYPTTIQLPLVPLLKANLIETRNLIIDAKSGVSG 235

Query: 883  AGRGAKEANLYTEIAEGIHSYGITKHRHVPEIEQGLSDCAHSKVTVSFTPHLMPMSRGMQ 1062
            AGRGAKEANLYTEIAEGIHSYGIT+HRHVPEIEQGLSD AH+KVTVSFTPHLMPMSRGMQ
Sbjct: 236  AGRGAKEANLYTEIAEGIHSYGITRHRHVPEIEQGLSDAAHAKVTVSFTPHLMPMSRGMQ 295

Query: 1063 STIYVEMAPGTTTEDLYQELRSSYEDEEFVVLLDKGATPHTRNVRGSNYCFMNVFPDRIP 1242
            STIYVEM PG T EDLY++L+ +YEDEEFV+LL+KG  PHTRNVRGSNYC +NVFPDRIP
Sbjct: 296  STIYVEMTPGVTIEDLYKQLKIAYEDEEFVILLEKGVVPHTRNVRGSNYCLLNVFPDRIP 355

Query: 1243 GRAIIISVIDNLVKGASGQAIQNLNLMVGIPENTGLLYQPLFP 1371
            GRAII+SVIDNLVKGASGQA+QNLN+M+G+PENTGLLYQPLFP
Sbjct: 356  GRAIIVSVIDNLVKGASGQALQNLNVMMGLPENTGLLYQPLFP 398


>ref|XP_004145353.1| PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase,
            chloroplastic-like [Cucumis sativus]
            gi|449473256|ref|XP_004153831.1| PREDICTED: probable
            N-acetyl-gamma-glutamyl-phosphate reductase,
            chloroplastic-like [Cucumis sativus]
            gi|449502406|ref|XP_004161631.1| PREDICTED: probable
            N-acetyl-gamma-glutamyl-phosphate reductase,
            chloroplastic-like [Cucumis sativus]
          Length = 389

 Score =  587 bits (1513), Expect = e-165
 Identities = 290/381 (76%), Positives = 328/381 (86%)
 Frame = +1

Query: 229  CFLKNEVRLFKDRNASGCSLFVRGASGKLEMKAESDKLVRIGVLGASGYTGSEIVRLLAN 408
            C LK+E ++ K R  S  ++F + +        + +  VRIGVLGASGYTGSEIVRLLAN
Sbjct: 11   CLLKDESQILKLRKRSVGNVFFKCSMSVKSQNPQPE--VRIGVLGASGYTGSEIVRLLAN 68

Query: 409  HPHFGISVMTADRKAGQSIGSVFPHLIRQNLPDMVAIKDADFSNVDAVFCCLPHGTTQEI 588
            HPHFGI++MTADRKAGQ   SVFPHL  Q+LP++V IKDADFS VDA+FCCLPHGTTQE+
Sbjct: 69   HPHFGITLMTADRKAGQPFSSVFPHLFTQDLPELVTIKDADFSKVDAIFCCLPHGTTQEV 128

Query: 589  IKALPKRLKIVDLSADFRLRSVDEYEEWYGQPHRAPDLQKEALYGLTEVLRDEIRNARLV 768
            IKALPK LKIVDLSADFRL+   EYEEWYGQPHRA DLQKEA+YGLTE+LRDE++ ARLV
Sbjct: 129  IKALPKELKIVDLSADFRLQDPFEYEEWYGQPHRAVDLQKEAVYGLTEILRDEVKGARLV 188

Query: 769  ANPGCYPTSIQIPLVPLIKANLIDLRNIIIDAKSGVSGAGRGAKEANLYTEIAEGIHSYG 948
            ANPGCYPTSIQ+PLVPL+KANLI L  IIID+KSGVSGAGRGAKEANLYTEIAEG++SYG
Sbjct: 189  ANPGCYPTSIQLPLVPLMKANLIQLGGIIIDSKSGVSGAGRGAKEANLYTEIAEGMYSYG 248

Query: 949  ITKHRHVPEIEQGLSDCAHSKVTVSFTPHLMPMSRGMQSTIYVEMAPGTTTEDLYQELRS 1128
            IT+HRHVPEIEQGLS+ A SKVTVSFTPHLMPM RGMQSTIYVEMAPG TTEDL+Q L+ 
Sbjct: 249  ITRHRHVPEIEQGLSEAAKSKVTVSFTPHLMPMIRGMQSTIYVEMAPGITTEDLHQHLKV 308

Query: 1129 SYEDEEFVVLLDKGATPHTRNVRGSNYCFMNVFPDRIPGRAIIISVIDNLVKGASGQAIQ 1308
            SY++EEFV +LDKG  P T NVRGSNYC +N+FPDRI GRAII+SVIDNLVKGASGQA+Q
Sbjct: 309  SYKEEEFVRVLDKGVVPRTHNVRGSNYCHINIFPDRIQGRAIIVSVIDNLVKGASGQALQ 368

Query: 1309 NLNLMVGIPENTGLLYQPLFP 1371
            NLNLM+G  E TGLLYQPLFP
Sbjct: 369  NLNLMMGFHETTGLLYQPLFP 389


>gb|ABK24282.1| unknown [Picea sitchensis]
          Length = 415

 Score =  585 bits (1507), Expect = e-164
 Identities = 284/348 (81%), Positives = 316/348 (90%)
 Frame = +1

Query: 328  ESDKLVRIGVLGASGYTGSEIVRLLANHPHFGISVMTADRKAGQSIGSVFPHLIRQNLPD 507
            ++ ++VR+GVLGASGYTGSEIVRLLA HP+F I++MTADRKAGQS+GSVFPHLI Q+LPD
Sbjct: 68   KAGEVVRVGVLGASGYTGSEIVRLLATHPYFKITLMTADRKAGQSLGSVFPHLITQDLPD 127

Query: 508  MVAIKDADFSNVDAVFCCLPHGTTQEIIKALPKRLKIVDLSADFRLRSVDEYEEWYGQPH 687
            M+AIKDADFS VDAVFCCLPHGTTQEII +LP  LK+VDLSADFRLR   +YEEWY QPH
Sbjct: 128  MIAIKDADFSKVDAVFCCLPHGTTQEIIASLPTTLKVVDLSADFRLRDTTQYEEWYNQPH 187

Query: 688  RAPDLQKEALYGLTEVLRDEIRNARLVANPGCYPTSIQIPLVPLIKANLIDLRNIIIDAK 867
            RAPDLQKEA+YGLTE+LR+ IRNAR+VANPGCYPTS+Q+PL+PL++A LI  RNIIID+K
Sbjct: 188  RAPDLQKEAIYGLTEILRENIRNARVVANPGCYPTSVQLPLIPLLEAGLIQTRNIIIDSK 247

Query: 868  SGVSGAGRGAKEANLYTEIAEGIHSYGITKHRHVPEIEQGLSDCAHSKVTVSFTPHLMPM 1047
            SGVSGAGRGAKEA+LYTEIAEGI+SYGIT+HRHVPEIEQGLSD + SKVTVSFTPHLMPM
Sbjct: 248  SGVSGAGRGAKEASLYTEIAEGINSYGITRHRHVPEIEQGLSDASKSKVTVSFTPHLMPM 307

Query: 1048 SRGMQSTIYVEMAPGTTTEDLYQELRSSYEDEEFVVLLDKGATPHTRNVRGSNYCFMNVF 1227
            SRGMQSTIYVEMA G   EDLYQ L S YEDEEFV+LL K A PHTRNVRGSNYCFMNVF
Sbjct: 308  SRGMQSTIYVEMASGVNIEDLYQHLCSRYEDEEFVILLQKKAVPHTRNVRGSNYCFMNVF 367

Query: 1228 PDRIPGRAIIISVIDNLVKGASGQAIQNLNLMVGIPENTGLLYQPLFP 1371
             DRIPGRAIIISVIDNLVKGASGQA+QNLNLM+G PEN GLL+Q LFP
Sbjct: 368  EDRIPGRAIIISVIDNLVKGASGQALQNLNLMMGYPENLGLLHQALFP 415


>emb|CAN73785.1| hypothetical protein VITISV_023769 [Vitis vinifera]
          Length = 329

 Score =  582 bits (1500), Expect = e-163
 Identities = 280/321 (87%), Positives = 307/321 (95%)
 Frame = +1

Query: 343  VRIGVLGASGYTGSEIVRLLANHPHFGISVMTADRKAGQSIGSVFPHLIRQNLPDMVAIK 522
            VRIGVLGASGYTGSEIVRLLANHPHFGI++MTADRKAGQSIGSVFPHLI Q+LPDMVAIK
Sbjct: 6    VRIGVLGASGYTGSEIVRLLANHPHFGITLMTADRKAGQSIGSVFPHLITQDLPDMVAIK 65

Query: 523  DADFSNVDAVFCCLPHGTTQEIIKALPKRLKIVDLSADFRLRSVDEYEEWYGQPHRAPDL 702
            DA+FSNVDAVFCCLPHGTTQ+IIKALPK LKIVDLSADFRL+ + EYEEWYGQPHRAPDL
Sbjct: 66   DANFSNVDAVFCCLPHGTTQDIIKALPKSLKIVDLSADFRLQEIAEYEEWYGQPHRAPDL 125

Query: 703  QKEALYGLTEVLRDEIRNARLVANPGCYPTSIQIPLVPLIKANLIDLRNIIIDAKSGVSG 882
            QKEA+YGLTE+LR+EI+ ARLVANPGCYPT+IQ+PLVPL+KANLI+ RN+IIDAKSGVSG
Sbjct: 126  QKEAVYGLTEILREEIKAARLVANPGCYPTTIQLPLVPLLKANLIETRNLIIDAKSGVSG 185

Query: 883  AGRGAKEANLYTEIAEGIHSYGITKHRHVPEIEQGLSDCAHSKVTVSFTPHLMPMSRGMQ 1062
            AGRGAKEANLYTEIAEGIHSYGIT+HRHVPEIEQGLSD AH+KVTVSFTPHLMPMSRGMQ
Sbjct: 186  AGRGAKEANLYTEIAEGIHSYGITRHRHVPEIEQGLSDAAHAKVTVSFTPHLMPMSRGMQ 245

Query: 1063 STIYVEMAPGTTTEDLYQELRSSYEDEEFVVLLDKGATPHTRNVRGSNYCFMNVFPDRIP 1242
            STIYVEM PG T EDLY++L+ +YEDEEFV+LL+KG  PHTRNVRGSNYC +NVFPDRIP
Sbjct: 246  STIYVEMTPGVTIEDLYKQLKIAYEDEEFVILLEKGVVPHTRNVRGSNYCLLNVFPDRIP 305

Query: 1243 GRAIIISVIDNLVKGASGQAI 1305
            GRAII+SVIDNLVKGASGQA+
Sbjct: 306  GRAIIVSVIDNLVKGASGQAL 326


>ref|XP_002330272.1| predicted protein [Populus trichocarpa] gi|222871307|gb|EEF08438.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  579 bits (1493), Expect = e-163
 Identities = 281/350 (80%), Positives = 321/350 (91%), Gaps = 1/350 (0%)
 Frame = +1

Query: 325  AESDKLVRIGVLGASGYTGSEIVRLLANHPHFGISVMTADRKAGQSIGSVFPHLIRQ-NL 501
            A+ +K VR+ +LGASGYTG+EI+RLLANHP+FGI+VMTADR AG+S+ SVFPHLI Q +L
Sbjct: 3    AKQEKEVRVALLGASGYTGAEIIRLLANHPYFGITVMTADRNAGKSMDSVFPHLITQKDL 62

Query: 502  PDMVAIKDADFSNVDAVFCCLPHGTTQEIIKALPKRLKIVDLSADFRLRSVDEYEEWYGQ 681
            P +V+  DADFS+VDAVFCCLPHGTTQEIIK LPK LKIVDLSADFRLR+V EYEEWYGQ
Sbjct: 63   PVLVSTSDADFSDVDAVFCCLPHGTTQEIIKGLPKGLKIVDLSADFRLRNVSEYEEWYGQ 122

Query: 682  PHRAPDLQKEALYGLTEVLRDEIRNARLVANPGCYPTSIQIPLVPLIKANLIDLRNIIID 861
            PHRAPDLQ+EA+YGLTE+LR+EI+NA LVANPGCYPTSIQ+PLVPLIKANLI+ +NII+D
Sbjct: 123  PHRAPDLQEEAVYGLTEILREEIKNAHLVANPGCYPTSIQLPLVPLIKANLIEHKNIIVD 182

Query: 862  AKSGVSGAGRGAKEANLYTEIAEGIHSYGITKHRHVPEIEQGLSDCAHSKVTVSFTPHLM 1041
            AKSGVSGAGRGAK ANLYTE+ EGI SYG+T+HRHVPEIEQGLSD AHSKVT+SFTPHLM
Sbjct: 183  AKSGVSGAGRGAKVANLYTELTEGIMSYGVTRHRHVPEIEQGLSDAAHSKVTISFTPHLM 242

Query: 1042 PMSRGMQSTIYVEMAPGTTTEDLYQELRSSYEDEEFVVLLDKGATPHTRNVRGSNYCFMN 1221
            PM+RGMQSTIYVEMA G TT++LYQ+L+ SY+DEEFV LL+KGA P T +VRGSNYC++N
Sbjct: 243  PMTRGMQSTIYVEMASGVTTDNLYQQLKVSYQDEEFVRLLEKGAVPRTHDVRGSNYCYIN 302

Query: 1222 VFPDRIPGRAIIISVIDNLVKGASGQAIQNLNLMVGIPENTGLLYQPLFP 1371
            VFPDRIPGRAIIISVIDNLVKGASGQA+QNLNLM+G PENTGL Y PLFP
Sbjct: 303  VFPDRIPGRAIIISVIDNLVKGASGQALQNLNLMMGFPENTGLGYLPLFP 352


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