BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004193
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro...   257   1e-66
gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras...   253   3e-65
ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloro...   251   1e-64
ref|NP_001237689.1| uncharacterized protein LOC100499902 [Glycin...   248   9e-64
ref|NP_001236787.1| uncharacterized protein LOC100500355 [Glycin...   246   2e-63

>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
           vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
           product [Vitis vinifera]
          Length = 167

 Score =  257 bits (657), Expect = 1e-66
 Identities = 132/167 (79%), Positives = 147/167 (88%), Gaps = 5/167 (2%)
 Frame = +2

Query: 20  MAQAVAMPIASSLSIIYK-----SPTNFQFPNATTSLPKFNGLSIKCARVGGVEIPNNKR 184
           MAQA+A P+A SLS+I       SP+N     +T + PKF GLSIKCARVGGVEIPN+KR
Sbjct: 1   MAQALATPLAPSLSLICNTRNPLSPSN-NLSFSTPAPPKFGGLSIKCARVGGVEIPNSKR 59

Query: 185 VEYSLQYVHGIGRTRARQILNDLNMENKITKQLSEEELITIRDEVSKYMIEGDLRRFNAL 364
           VEYSLQY+HGIGR+R++QIL DL MENKITK LSEEELIT+RDEVSKYMIEGDLRRFNAL
Sbjct: 60  VEYSLQYIHGIGRSRSKQILCDLGMENKITKDLSEEELITLRDEVSKYMIEGDLRRFNAL 119

Query: 365 AIRRLKEIQCYRGVRHIKGLPCRGQRTKNNCRTLKGKRVAIAGKKKA 505
           AIRRLKEIQCYRG+RHI+GLPCRGQRTKNNCRTLKGKRV+IAGKKKA
Sbjct: 120 AIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIAGKKKA 166


>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
          Length = 168

 Score =  253 bits (645), Expect = 3e-65
 Identities = 126/168 (75%), Positives = 144/168 (85%), Gaps = 4/168 (2%)
 Frame = +2

Query: 20  MAQAVAMPIASSLSIIYKSPTNFQFPNATT----SLPKFNGLSIKCARVGGVEIPNNKRV 187
           MAQ +AMP+A SLS+I     N       +    + PK +GLSI+CARVGGVEIPNNKRV
Sbjct: 1   MAQTLAMPVAPSLSLICNGWRNNSLSTFVSLPISNPPKIHGLSIQCARVGGVEIPNNKRV 60

Query: 188 EYSLQYVHGIGRTRARQILNDLNMENKITKQLSEEELITIRDEVSKYMIEGDLRRFNALA 367
           EYSLQY+HG+GR+RARQIL+DL+M+NKITK LSEEELIT+RDEVSKYMIEGDLRRFNAL 
Sbjct: 61  EYSLQYIHGVGRSRARQILSDLSMQNKITKDLSEEELITLRDEVSKYMIEGDLRRFNALN 120

Query: 368 IRRLKEIQCYRGVRHIKGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 511
           IR LKEIQC+RG+RHI+GLPCRGQRTKNNCRTLKGKRV +AGKKKAPR
Sbjct: 121 IRGLKEIQCHRGIRHIQGLPCRGQRTKNNCRTLKGKRVTVAGKKKAPR 168


>ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Cucumis
           sativus] gi|449518817|ref|XP_004166432.1| PREDICTED: 30S
           ribosomal protein S13, chloroplastic-like [Cucumis
           sativus]
          Length = 167

 Score =  251 bits (640), Expect = 1e-64
 Identities = 130/168 (77%), Positives = 143/168 (85%), Gaps = 4/168 (2%)
 Frame = +2

Query: 20  MAQAVAMPIASSLSIIYKSPTNFQFPNATTSLPKFN----GLSIKCARVGGVEIPNNKRV 187
           MAQ  A+P+A SLS+I  S  NF   + T S P  N    GL IKC RVGGVEIPNNKRV
Sbjct: 1   MAQTSAIPLAHSLSLISNS-RNFNPLSNTLSFPISNPQVRGLQIKCVRVGGVEIPNNKRV 59

Query: 188 EYSLQYVHGIGRTRARQILNDLNMENKITKQLSEEELITIRDEVSKYMIEGDLRRFNALA 367
           +YSLQYVHGIGR  A++IL DLN+ENKITK LSEEELI+IRDEVSKYMIEGDLRRFNALA
Sbjct: 60  QYSLQYVHGIGRNNAKKILFDLNVENKITKDLSEEELISIRDEVSKYMIEGDLRRFNALA 119

Query: 368 IRRLKEIQCYRGVRHIKGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 511
           IRRLKEIQCYRG+RHI+GLPCRGQRTKNNCRTLKGK++AIAGKKKAPR
Sbjct: 120 IRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKAPR 167


>ref|NP_001237689.1| uncharacterized protein LOC100499902 [Glycine max]
           gi|255627531|gb|ACU14110.1| unknown [Glycine max]
          Length = 162

 Score =  248 bits (632), Expect = 9e-64
 Identities = 119/161 (73%), Positives = 140/161 (86%)
 Frame = +2

Query: 20  MAQAVAMPIASSLSIIYKSPTNFQFPNATTSLPKFNGLSIKCARVGGVEIPNNKRVEYSL 199
           MAQ +AMP+A SL+II  S  +        + PKF GLSIKC RVGGVEIPNNKR+EYSL
Sbjct: 1   MAQTLAMPVAPSLAIISNSRLSKTLSVPVLNNPKFQGLSIKCVRVGGVEIPNNKRIEYSL 60

Query: 200 QYVHGIGRTRARQILNDLNMENKITKQLSEEELITIRDEVSKYMIEGDLRRFNALAIRRL 379
           Q++HG+GRTRA+QIL D+ M+NKITK+L+EEELIT+RDEVSKYMIEGDLRRFNA+ I+RL
Sbjct: 61  QHIHGVGRTRAKQILCDIQMDNKITKELTEEELITLRDEVSKYMIEGDLRRFNAVNIKRL 120

Query: 380 KEIQCYRGVRHIKGLPCRGQRTKNNCRTLKGKRVAIAGKKK 502
           K+IQCYRG+RHI+GLPCRGQRTKNNCRTLKGK+VAI GKKK
Sbjct: 121 KDIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAITGKKK 161


>ref|NP_001236787.1| uncharacterized protein LOC100500355 [Glycine max]
           gi|255630109|gb|ACU15408.1| unknown [Glycine max]
          Length = 162

 Score =  246 bits (629), Expect = 2e-63
 Identities = 119/161 (73%), Positives = 139/161 (86%)
 Frame = +2

Query: 20  MAQAVAMPIASSLSIIYKSPTNFQFPNATTSLPKFNGLSIKCARVGGVEIPNNKRVEYSL 199
           MAQ +AMP+A SL+II  S  +        + PK  G SIKC RVGGVEIPNNKR+EYSL
Sbjct: 1   MAQTLAMPVAPSLAIISNSRLSNTLSVPVLNKPKVQGSSIKCVRVGGVEIPNNKRIEYSL 60

Query: 200 QYVHGIGRTRARQILNDLNMENKITKQLSEEELITIRDEVSKYMIEGDLRRFNALAIRRL 379
           QY+HG+GRTRA+QIL D+ M+NKITK+L+EEELIT+RDEVSKYMIEGDLRRFNA+ I+RL
Sbjct: 61  QYIHGVGRTRAKQILCDIQMDNKITKELTEEELITLRDEVSKYMIEGDLRRFNAVNIKRL 120

Query: 380 KEIQCYRGVRHIKGLPCRGQRTKNNCRTLKGKRVAIAGKKK 502
           K+IQCYRG+RHI+GLPCRGQRTKNNCRTLKGK+VAIAGKKK
Sbjct: 121 KDIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 161