BLASTX nr result

ID: Coptis24_contig00004189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004189
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot...   425   e-116
ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane prot...   424   e-116
ref|XP_002312786.1| porin/voltage-dependent anion-selective chan...   424   e-116
gb|AAB38498.1| porin [Mesembryanthemum crystallinum]                  422   e-116
ref|XP_002520135.1| voltage-dependent anion-selective channel, p...   421   e-115

>ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
            isoform 1 [Vitis vinifera]
          Length = 276

 Score =  425 bits (1093), Expect = e-116
 Identities = 206/276 (74%), Positives = 241/276 (87%)
 Frame = -2

Query: 1128 MVKGPGLYTDLGKKTRDLLYKDFQSDKKATLTTVTASGLAITTSATVKGDLLLADLNAKL 949
            M KGPGLY+D+GK  RDLLY+D+QSD K T+TT T+SG+AIT+S T KG+L +AD+N +L
Sbjct: 1    MGKGPGLYSDIGKIARDLLYRDYQSDHKFTVTTYTSSGVAITSSGTKKGELFIADVNTQL 60

Query: 948  VNKNVTTDLKVDTNSRLTTTITVDEAAPGLKTIVSFVAPDQKSGKVELQYQHDYAGISTS 769
             NKN+TTD+KVDTNS L TTITVDE APGLKTI SF+ PDQ+SGKVELQY H+YAGISTS
Sbjct: 61   KNKNITTDVKVDTNSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKVELQYLHEYAGISTS 120

Query: 768  VGLTANPILNFSGVIGTNVLAVGTDISFDTAARNLTKCNTGLTFSNSDLIAALTLNNKGE 589
            +GLTANPI+NFSGV+G N L++GTD+SFDTA  N TKCN GL FSN+DLIAALTLN+KG+
Sbjct: 121  IGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTLNDKGD 180

Query: 588  TLTASYYHVLSPLTSTAVGGELAHSFSTNENTLTFGTQHALDPLTMVKARVDNYGKLSGI 409
            TL ASYYH +SPLT+TAVG EL+H FSTNENTLT GTQHALDPLT VKAR +N GK+S +
Sbjct: 181  TLNASYYHTVSPLTNTAVGAELSHCFSTNENTLTIGTQHALDPLTKVKARANNSGKVSAL 240

Query: 408  IQHEWRPKSLVTVSGEVDTRAIEKSAKVGLALALKP 301
            IQHEWRPKSL T+SGEVD RA+EKSAK+GLALALKP
Sbjct: 241  IQHEWRPKSLFTISGEVDARAVEKSAKIGLALALKP 276


>ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane protein porin of 34 kDa-like
            [Cucumis sativus] gi|449523227|ref|XP_004168625.1|
            PREDICTED: mitochondrial outer membrane protein porin of
            34 kDa-like [Cucumis sativus]
          Length = 276

 Score =  424 bits (1091), Expect = e-116
 Identities = 206/276 (74%), Positives = 244/276 (88%)
 Frame = -2

Query: 1128 MVKGPGLYTDLGKKTRDLLYKDFQSDKKATLTTVTASGLAITTSATVKGDLLLADLNAKL 949
            M KGPGLY+D+GK+ RDLLYKD+QSD K T+TT + +G+AIT+S T KGDL LAD+N +L
Sbjct: 1    MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 948  VNKNVTTDLKVDTNSRLTTTITVDEAAPGLKTIVSFVAPDQKSGKVELQYQHDYAGISTS 769
             NKN+TTD+KVDT+S L TTITVDE APGLK I SF  PDQ+SGKVELQY HDYAGISTS
Sbjct: 61   KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 768  VGLTANPILNFSGVIGTNVLAVGTDISFDTAARNLTKCNTGLTFSNSDLIAALTLNNKGE 589
            +GLTANPI+NFSGV+G+N+LA+GTD+SFDT   N TK NTGL+F+N+DLIA+LTLN+KG+
Sbjct: 121  IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTLNDKGD 180

Query: 588  TLTASYYHVLSPLTSTAVGGELAHSFSTNENTLTFGTQHALDPLTMVKARVDNYGKLSGI 409
            TL+ASYYH ++PLTSTAVG E+AHSFS+NENT+T GTQHALDPLT VKARV+N+GK S +
Sbjct: 181  TLSASYYHTVNPLTSTAVGAEVAHSFSSNENTITVGTQHALDPLTSVKARVNNFGKASAL 240

Query: 408  IQHEWRPKSLVTVSGEVDTRAIEKSAKVGLALALKP 301
            IQHEWRPKS  TVSGEVDT+AIEKSAKVGLALALKP
Sbjct: 241  IQHEWRPKSFFTVSGEVDTKAIEKSAKVGLALALKP 276


>ref|XP_002312786.1| porin/voltage-dependent anion-selective channel protein [Populus
            trichocarpa] gi|118481103|gb|ABK92505.1| unknown [Populus
            trichocarpa] gi|222852606|gb|EEE90153.1|
            porin/voltage-dependent anion-selective channel protein
            [Populus trichocarpa]
          Length = 276

 Score =  424 bits (1090), Expect = e-116
 Identities = 204/276 (73%), Positives = 247/276 (89%)
 Frame = -2

Query: 1128 MVKGPGLYTDLGKKTRDLLYKDFQSDKKATLTTVTASGLAITTSATVKGDLLLADLNAKL 949
            M KGPGLY D+GKK RDLLYKD+QSD K T+TT T++G+AIT++   KG+L LAD++++L
Sbjct: 1    MGKGPGLYFDIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSTGIKKGELFLADISSQL 60

Query: 948  VNKNVTTDLKVDTNSRLTTTITVDEAAPGLKTIVSFVAPDQKSGKVELQYQHDYAGISTS 769
             NKN+TTD+KVDTNS L TTIT+DE APGLKTI SF  PDQ+SGKVELQYQH+YAGISTS
Sbjct: 61   KNKNITTDVKVDTNSNLLTTITIDEPAPGLKTIFSFKVPDQRSGKVELQYQHEYAGISTS 120

Query: 768  VGLTANPILNFSGVIGTNVLAVGTDISFDTAARNLTKCNTGLTFSNSDLIAALTLNNKGE 589
            +GLTANPI+NFSGV+G+NV+A+GTD+SFDTA  N TKCN GL+++NSDLIA+LT+N+KG+
Sbjct: 121  LGLTANPIVNFSGVVGSNVVALGTDLSFDTATGNFTKCNAGLSYTNSDLIASLTVNDKGD 180

Query: 588  TLTASYYHVLSPLTSTAVGGELAHSFSTNENTLTFGTQHALDPLTMVKARVDNYGKLSGI 409
            TL+ASYYH +SPLTSTAVG EL HSFS+NEN LT GTQHALDPLT VKAR++NYGK+S +
Sbjct: 181  TLSASYYHTVSPLTSTAVGAELTHSFSSNENILTIGTQHALDPLTTVKARLNNYGKVSAL 240

Query: 408  IQHEWRPKSLVTVSGEVDTRAIEKSAKVGLALALKP 301
            IQ+EWRPKSL T+SGEVDT+AIEKSAKVGLAL+LKP
Sbjct: 241  IQNEWRPKSLFTISGEVDTKAIEKSAKVGLALSLKP 276


>gb|AAB38498.1| porin [Mesembryanthemum crystallinum]
          Length = 276

 Score =  422 bits (1086), Expect = e-116
 Identities = 203/276 (73%), Positives = 243/276 (88%)
 Frame = -2

Query: 1128 MVKGPGLYTDLGKKTRDLLYKDFQSDKKATLTTVTASGLAITTSATVKGDLLLADLNAKL 949
            M KGPGLYTD+GKK RDLLY+D+Q+D+K ++TT + +G+AIT+S T KGDL LAD+N +L
Sbjct: 1    MAKGPGLYTDIGKKARDLLYRDYQTDQKFSITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 948  VNKNVTTDLKVDTNSRLTTTITVDEAAPGLKTIVSFVAPDQKSGKVELQYQHDYAGISTS 769
             NKNVTTD+KVDTNS L TTITVDEAAPGLKTI+SF  PDQ+SGK+ELQY HDYAGI TS
Sbjct: 61   KNKNVTTDIKVDTNSNLLTTITVDEAAPGLKTILSFRVPDQRSGKLELQYLHDYAGICTS 120

Query: 768  VGLTANPILNFSGVIGTNVLAVGTDISFDTAARNLTKCNTGLTFSNSDLIAALTLNNKGE 589
            VGLTANPI+NFSGV+GTN+LA GTD+SFD+   N TKCN GL+F+N+DLIA+LTLN+KG+
Sbjct: 121  VGLTANPIVNFSGVLGTNLLAFGTDVSFDSKTGNFTKCNAGLSFANADLIASLTLNDKGD 180

Query: 588  TLTASYYHVLSPLTSTAVGGELAHSFSTNENTLTFGTQHALDPLTMVKARVDNYGKLSGI 409
            TL ASYYH +SPLTS+AVG E+AHSFSTN+NT+T G QHA+DPLT +K RV+N+GK + +
Sbjct: 181  TLNASYYHTISPLTSSAVGAEVAHSFSTNQNTITLGAQHAIDPLTNLKGRVNNFGKATAL 240

Query: 408  IQHEWRPKSLVTVSGEVDTRAIEKSAKVGLALALKP 301
            IQHEWRPKSLVT S EVDT+AIEKSAKVGLALALKP
Sbjct: 241  IQHEWRPKSLVTFSAEVDTKAIEKSAKVGLALALKP 276


>ref|XP_002520135.1| voltage-dependent anion-selective channel, putative [Ricinus
            communis] gi|223540627|gb|EEF42190.1| voltage-dependent
            anion-selective channel, putative [Ricinus communis]
          Length = 276

 Score =  421 bits (1082), Expect = e-115
 Identities = 202/276 (73%), Positives = 246/276 (89%)
 Frame = -2

Query: 1128 MVKGPGLYTDLGKKTRDLLYKDFQSDKKATLTTVTASGLAITTSATVKGDLLLADLNAKL 949
            M KGPGLYTD+GKK RDLLYKD+Q D K T+TT T++G+AIT++   KG++ L D+ ++L
Sbjct: 1    MGKGPGLYTDIGKKARDLLYKDYQGDHKFTVTTYTSTGVAITSTGIKKGEIYLGDITSQL 60

Query: 948  VNKNVTTDLKVDTNSRLTTTITVDEAAPGLKTIVSFVAPDQKSGKVELQYQHDYAGISTS 769
             NKN+TTD+KVDT+S ++TTITVDE APGLKTI SF  PDQ+SGKVELQYQH++AGISTS
Sbjct: 61   KNKNITTDIKVDTSSNVSTTITVDEPAPGLKTIFSFKIPDQRSGKVELQYQHEHAGISTS 120

Query: 768  VGLTANPILNFSGVIGTNVLAVGTDISFDTAARNLTKCNTGLTFSNSDLIAALTLNNKGE 589
            +GLTANPI+NFSGVIG++ +A+GTD+SFDTA+ N TK N GL++SN+DLIA+LTLN+KG+
Sbjct: 121  IGLTANPIVNFSGVIGSSAVALGTDLSFDTASGNFTKLNAGLSYSNTDLIASLTLNDKGD 180

Query: 588  TLTASYYHVLSPLTSTAVGGELAHSFSTNENTLTFGTQHALDPLTMVKARVDNYGKLSGI 409
            TL ASYYH++SPLT+TAVG EL HSFS+NENTLTFGTQHALDPLT VKARV++YGK S +
Sbjct: 181  TLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTFGTQHALDPLTTVKARVNSYGKASAL 240

Query: 408  IQHEWRPKSLVTVSGEVDTRAIEKSAKVGLALALKP 301
            IQHEWRPKSL T+SGEVDTRAIEKSAK+GLALALKP
Sbjct: 241  IQHEWRPKSLFTISGEVDTRAIEKSAKIGLALALKP 276


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