BLASTX nr result

ID: Coptis24_contig00004185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004185
         (2090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276924.2| PREDICTED: T-complex protein 1 subunit alpha...   941   0.0  
ref|XP_002524629.1| chaperonin containing t-complex protein 1, a...   938   0.0  
dbj|BAC22124.1| t-complex polypeptide 1 [Bruguiera sexangula]         934   0.0  
ref|NP_001053500.1| Os04g0551800 [Oryza sativa Japonica Group] g...   930   0.0  
ref|XP_004138907.1| PREDICTED: T-complex protein 1 subunit alpha...   929   0.0  

>ref|XP_002276924.2| PREDICTED: T-complex protein 1 subunit alpha-like [Vitis vinifera]
            gi|297734570|emb|CBI16621.3| unnamed protein product
            [Vitis vinifera]
          Length = 546

 Score =  941 bits (2431), Expect = 0.0
 Identities = 489/537 (91%), Positives = 517/537 (96%), Gaps = 1/537 (0%)
 Frame = -1

Query: 1994 DILGDRQSGQDVRTQNVVACTAISNIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML 1815
            DI+G+RQSGQDVR+QNVVAC A++NIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML
Sbjct: 9    DIMGERQSGQDVRSQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML 68

Query: 1814 EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM 1635
            EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM
Sbjct: 69   EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM 128

Query: 1634 REACKYVDDNLAVKVEKLGKDSLVNCAKTSMSSKLIADDSNFFANLVVDAVQAVKTTNAR 1455
            REACKYVD+ LAVKVEKLGKDSL+NCAKTSMSSKLIA DS+FFA+LVVDAVQAVKTTNAR
Sbjct: 129  REACKYVDEKLAVKVEKLGKDSLINCAKTSMSSKLIAGDSDFFASLVVDAVQAVKTTNAR 188

Query: 1454 GEIKYPIKGINILKAHGKSAKDSYLLNGYALNTGRAAQGMPLRVSPARIACLDFNLQKTK 1275
            GE+KYPIKGINILKAHGKSAKDSYLLNGYALNTGRAAQGMPLRV+PARIACLDFNLQ+TK
Sbjct: 189  GEVKYPIKGINILKAHGKSAKDSYLLNGYALNTGRAAQGMPLRVAPARIACLDFNLQRTK 248

Query: 1274 MQMGVQVLVSDPRELEKIRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA 1095
            MQ+GVQVLV+DPRELEKIRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA
Sbjct: 249  MQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA 308

Query: 1094 IAVRRVRKEDLRHVAKATGATAVSTFADMEGDETFDSSFLGNADEVVEERIADDDVIMIK 915
            IAVRRVRK+D+RHVAKATGAT VSTFADMEGDETFDSSFLG ADEVVEERIADDDVIMIK
Sbjct: 309  IAVRRVRKDDMRHVAKATGATMVSTFADMEGDETFDSSFLGYADEVVEERIADDDVIMIK 368

Query: 914  GTKNSSAVSLILRGANDYMLDEMERSLHDALCIVKRTLESNKVVAGGGAVESALCVYLER 735
            GTK +S VSLILRGANDYMLDEM+R+LHDAL IVKRTLESN VVAGGGAVE+AL VYLE 
Sbjct: 369  GTKTTSGVSLILRGANDYMLDEMDRALHDALSIVKRTLESNTVVAGGGAVEAALSVYLEY 428

Query: 734  LALSFGSREQLAVGEFAESLLVIPKILAVNAAKDATELVSKLRAYHHTAQDSADKRHLSS 555
            LA + GSREQLA+ EFAESLL+IPK+LAVNAAKDATELV+KLRAYHHTAQ  ADK+HLSS
Sbjct: 429  LATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSS 488

Query: 554  MGLDLSNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDE-QGEE 387
            MGLDL  GT+RNNLEAGVIEPAMSKVKI+QFATEAAITILRIDDMIKLVKDE Q EE
Sbjct: 489  MGLDLLKGTVRNNLEAGVIEPAMSKVKILQFATEAAITILRIDDMIKLVKDETQNEE 545


>ref|XP_002524629.1| chaperonin containing t-complex protein 1, alpha subunit, tcpa,
            putative [Ricinus communis] gi|223536098|gb|EEF37754.1|
            chaperonin containing t-complex protein 1, alpha subunit,
            tcpa, putative [Ricinus communis]
          Length = 546

 Score =  938 bits (2424), Expect = 0.0
 Identities = 487/532 (91%), Positives = 511/532 (96%)
 Frame = -1

Query: 1994 DILGDRQSGQDVRTQNVVACTAISNIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML 1815
            DILG+RQSGQDVRTQNV+AC A++NIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML
Sbjct: 9    DILGERQSGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML 68

Query: 1814 EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM 1635
            EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM
Sbjct: 69   EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM 128

Query: 1634 REACKYVDDNLAVKVEKLGKDSLVNCAKTSMSSKLIADDSNFFANLVVDAVQAVKTTNAR 1455
            REACKYVD+ LAVKVEKLGKDSLVNCAKTSMSSKLIA DS+FFANLVVDAVQAVK TNAR
Sbjct: 129  REACKYVDEKLAVKVEKLGKDSLVNCAKTSMSSKLIAGDSDFFANLVVDAVQAVKMTNAR 188

Query: 1454 GEIKYPIKGINILKAHGKSAKDSYLLNGYALNTGRAAQGMPLRVSPARIACLDFNLQKTK 1275
            GEIKYPIK INILKAHG+SAKDSYLLNGYALNTGRAAQGMP RV+PA+IACLDFNLQKTK
Sbjct: 189  GEIKYPIKSINILKAHGQSAKDSYLLNGYALNTGRAAQGMPTRVAPAKIACLDFNLQKTK 248

Query: 1274 MQMGVQVLVSDPRELEKIRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA 1095
            MQ+GVQVLV+DPRELEKIRQRE DMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA
Sbjct: 249  MQLGVQVLVTDPRELEKIRQREVDMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA 308

Query: 1094 IAVRRVRKEDLRHVAKATGATAVSTFADMEGDETFDSSFLGNADEVVEERIADDDVIMIK 915
            IAVRRVRKED+RHVAKATG T VSTFADMEGDETFD S LG ADEVVEERIADDDVIMIK
Sbjct: 309  IAVRRVRKEDMRHVAKATGGTMVSTFADMEGDETFDPSLLGYADEVVEERIADDDVIMIK 368

Query: 914  GTKNSSAVSLILRGANDYMLDEMERSLHDALCIVKRTLESNKVVAGGGAVESALCVYLER 735
            GTK++SAVSLILRGANDYMLDEM+R+LHDALCIVKRTLESN VVAGGGAVESAL VYLE 
Sbjct: 369  GTKSTSAVSLILRGANDYMLDEMDRALHDALCIVKRTLESNTVVAGGGAVESALSVYLEY 428

Query: 734  LALSFGSREQLAVGEFAESLLVIPKILAVNAAKDATELVSKLRAYHHTAQDSADKRHLSS 555
            LA + GSREQLA+ EFAESLL+IPK+LAVNAAKDATELV+KLRAYHHTAQ  ADK+HLSS
Sbjct: 429  LATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSS 488

Query: 554  MGLDLSNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDE 399
            MGLDLS GTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKL+KD+
Sbjct: 489  MGLDLSRGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLIKDQ 540


>dbj|BAC22124.1| t-complex polypeptide 1 [Bruguiera sexangula]
          Length = 546

 Score =  934 bits (2414), Expect = 0.0
 Identities = 486/537 (90%), Positives = 515/537 (95%), Gaps = 1/537 (0%)
 Frame = -1

Query: 1994 DILGDRQSGQDVRTQNVVACTAISNIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML 1815
            DILG+RQSGQDVRTQNVVAC A++NIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML
Sbjct: 9    DILGERQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML 68

Query: 1814 EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM 1635
            EVEHPAAKVLVELAELQDREVGDGTTSVVI+AAELLKRANDLVRNKIHPTSIISGYRLAM
Sbjct: 69   EVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRANDLVRNKIHPTSIISGYRLAM 128

Query: 1634 REACKYVDDNLAVKVEKLGKDSLVNCAKTSMSSKLIADDSNFFANLVVDAVQAVKTTNAR 1455
            REACKYV++ L++KVEKLGKDSLVNCAKTSMSSKLIA DS+FFANLVVDAVQAVK TNAR
Sbjct: 129  REACKYVEEKLSMKVEKLGKDSLVNCAKTSMSSKLIAGDSDFFANLVVDAVQAVKMTNAR 188

Query: 1454 GEIKYPIKGINILKAHGKSAKDSYLLNGYALNTGRAAQGMPLRVSPARIACLDFNLQKTK 1275
            GEIKYPIK INILKAHGKSA+DS LLNGYALNTGRAAQGMP+RV+PARIACLDFNLQKTK
Sbjct: 189  GEIKYPIKSINILKAHGKSARDSCLLNGYALNTGRAAQGMPMRVAPARIACLDFNLQKTK 248

Query: 1274 MQMGVQVLVSDPRELEKIRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA 1095
            MQ+GVQVLV+DPRELE+IRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA
Sbjct: 249  MQLGVQVLVTDPRELERIRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA 308

Query: 1094 IAVRRVRKEDLRHVAKATGATAVSTFADMEGDETFDSSFLGNADEVVEERIADDDVIMIK 915
            IAVRRVRKED+RHVAKATGAT VSTFADMEG+ETFDSS LG A+EVVEERIADDDVIMIK
Sbjct: 309  IAVRRVRKEDMRHVAKATGATLVSTFADMEGEETFDSSLLGQAEEVVEERIADDDVIMIK 368

Query: 914  GTKNSSAVSLILRGANDYMLDEMERSLHDALCIVKRTLESNKVVAGGGAVESALCVYLER 735
            GTK +SAVSLILRGANDYMLDEMER+LHDALCIVKRTLESN VVAGGGAVE+AL V+LE 
Sbjct: 369  GTKTTSAVSLILRGANDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVEAALSVHLEY 428

Query: 734  LALSFGSREQLAVGEFAESLLVIPKILAVNAAKDATELVSKLRAYHHTAQDSADKRHLSS 555
            LA + GSREQLA+ EFAESLL+IPK+LAVNAAKDATEL +KLRAYHHTAQ  ADK+HLSS
Sbjct: 429  LATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELAAKLRAYHHTAQTKADKKHLSS 488

Query: 554  MGLDLSNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDE-QGEE 387
            MGLDLS GTIRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLVKDE Q EE
Sbjct: 489  MGLDLSKGTIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLVKDETQNEE 545


>ref|NP_001053500.1| Os04g0551800 [Oryza sativa Japonica Group]
            gi|38345468|emb|CAE01686.2| OSJNBa0010H02.6 [Oryza sativa
            Japonica Group] gi|113565071|dbj|BAF15414.1| Os04g0551800
            [Oryza sativa Japonica Group]
            gi|215768326|dbj|BAH00555.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222629326|gb|EEE61458.1|
            hypothetical protein OsJ_15705 [Oryza sativa Japonica
            Group]
          Length = 545

 Score =  930 bits (2403), Expect = 0.0
 Identities = 476/536 (88%), Positives = 513/536 (95%)
 Frame = -1

Query: 1994 DILGDRQSGQDVRTQNVVACTAISNIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML 1815
            DILG+RQSGQDVRTQNVVAC A++NIVKSSLGPVGLDKMLVDDIGDVTITNDGATIL+ML
Sbjct: 9    DILGERQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILRML 68

Query: 1814 EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM 1635
            EVEHPAAKVLVELAELQDREVGDGTTSVVI+AAELLKR NDLVRNKIHPTSIISGYRLAM
Sbjct: 69   EVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVRNKIHPTSIISGYRLAM 128

Query: 1634 REACKYVDDNLAVKVEKLGKDSLVNCAKTSMSSKLIADDSNFFANLVVDAVQAVKTTNAR 1455
            REACKYV++ LAVKV+KLGKDSL+NCAKTSMSSKLI  DS+FFANLVVDAVQAVKTTNA+
Sbjct: 129  REACKYVEEKLAVKVDKLGKDSLINCAKTSMSSKLINSDSDFFANLVVDAVQAVKTTNAK 188

Query: 1454 GEIKYPIKGINILKAHGKSAKDSYLLNGYALNTGRAAQGMPLRVSPARIACLDFNLQKTK 1275
            GE+KYPIK INILKAHGKSAKDSYLLNGYALNTGRAAQGMP RV+PARIACLDFNLQKTK
Sbjct: 189  GEVKYPIKSINILKAHGKSAKDSYLLNGYALNTGRAAQGMPTRVTPARIACLDFNLQKTK 248

Query: 1274 MQMGVQVLVSDPRELEKIRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA 1095
            MQ+GVQVLV+DPRELEKIRQRE+D+TKERIEK+LKAGANVVLTTKGIDDM+LKYFVEAGA
Sbjct: 249  MQLGVQVLVTDPRELEKIRQRESDITKERIEKILKAGANVVLTTKGIDDMSLKYFVEAGA 308

Query: 1094 IAVRRVRKEDLRHVAKATGATAVSTFADMEGDETFDSSFLGNADEVVEERIADDDVIMIK 915
            IAVRRVRKEDLRHVAKATGAT VSTFADMEG+ETFDSSFLG+ADEVVEERIADDDVI++K
Sbjct: 309  IAVRRVRKEDLRHVAKATGATMVSTFADMEGEETFDSSFLGHADEVVEERIADDDVILVK 368

Query: 914  GTKNSSAVSLILRGANDYMLDEMERSLHDALCIVKRTLESNKVVAGGGAVESALCVYLER 735
            GTKN+SAVS+ILRGAND+MLDE++RSLHDALCIVKRTLESN VVAGGGAVE+AL VYLE 
Sbjct: 369  GTKNTSAVSIILRGANDFMLDEIDRSLHDALCIVKRTLESNMVVAGGGAVEAALSVYLEN 428

Query: 734  LALSFGSREQLAVGEFAESLLVIPKILAVNAAKDATELVSKLRAYHHTAQDSADKRHLSS 555
            LA + GSREQLA+ EFAESLL+IPK+L+VNAAKDATELV+KLRAYHHTAQ  ADK+H SS
Sbjct: 429  LATTLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHTAQTKADKQHFSS 488

Query: 554  MGLDLSNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDEQGEE 387
            MGLDLS G IRNNLE GVIEPAMSKVKIIQFATEAAITILRIDDMIKL K+E G E
Sbjct: 489  MGLDLSKGIIRNNLEYGVIEPAMSKVKIIQFATEAAITILRIDDMIKLTKEESGNE 544


>ref|XP_004138907.1| PREDICTED: T-complex protein 1 subunit alpha-like [Cucumis sativus]
            gi|449506278|ref|XP_004162702.1| PREDICTED: T-complex
            protein 1 subunit alpha-like [Cucumis sativus]
          Length = 545

 Score =  929 bits (2401), Expect = 0.0
 Identities = 484/537 (90%), Positives = 513/537 (95%), Gaps = 1/537 (0%)
 Frame = -1

Query: 1994 DILGDRQSGQDVRTQNVVACTAISNIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKML 1815
            DILG+RQSGQDVRTQNVVAC A++NIVKSSLGPVGLDKMLVDD GDVTITNDGATILKML
Sbjct: 9    DILGERQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDYGDVTITNDGATILKML 68

Query: 1814 EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM 1635
            EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM
Sbjct: 69   EVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM 128

Query: 1634 REACKYVDDNLAVKVEKLGKDSLVNCAKTSMSSKLIADDSNFFANLVVDAVQAVKTTNAR 1455
            REACKYV++ LAVKVEKLGKDSL+NCAKTSMSSKLI  DS+FFANLVVDAVQAVK TNAR
Sbjct: 129  REACKYVEEKLAVKVEKLGKDSLINCAKTSMSSKLITSDSDFFANLVVDAVQAVKMTNAR 188

Query: 1454 GEIKYPIKGINILKAHGKSAKDSYLLNGYALNTGRAAQGMPLRVSPARIACLDFNLQKTK 1275
            GEIKYPIKGINILKAHGKSAKDS+LLNGYALNTGRAAQGMP+RV+PARIACLDFNLQKTK
Sbjct: 189  GEIKYPIKGINILKAHGKSAKDSFLLNGYALNTGRAAQGMPVRVAPARIACLDFNLQKTK 248

Query: 1274 MQMGVQVLVSDPRELEKIRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA 1095
            MQ+GVQVLV+DPRELEKIRQRE+DM KERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA
Sbjct: 249  MQLGVQVLVTDPRELEKIRQRESDMMKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA 308

Query: 1094 IAVRRVRKEDLRHVAKATGATAVSTFADMEGDETFDSSFLGNADEVVEERIADDDVIMIK 915
            IAVRRV+KED+RHVAKATGAT VSTFADMEG+ETF+ S LG ADEVVEERIADDDV+MIK
Sbjct: 309  IAVRRVKKEDMRHVAKATGATMVSTFADMEGEETFEPSLLGYADEVVEERIADDDVVMIK 368

Query: 914  GTKNSSAVSLILRGANDYMLDEMERSLHDALCIVKRTLESNKVVAGGGAVESALCVYLER 735
            G+K +SAVSLILRGANDYMLDEMER+LHDAL IVKRTLESN VVAGGGAVESAL VYLE 
Sbjct: 369  GSKTTSAVSLILRGANDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEY 428

Query: 734  LALSFGSREQLAVGEFAESLLVIPKILAVNAAKDATELVSKLRAYHHTAQDSADKRHLSS 555
            LA + GSREQLA+ EFAESLL+IPK+LAVNAAKDATELV+KLRAYHHTAQ  ADK+HLSS
Sbjct: 429  LATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSS 488

Query: 554  MGLDLSNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDE-QGEE 387
            MGLDL+NG+IRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKL KDE Q EE
Sbjct: 489  MGLDLTNGSIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545


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