BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004184
         (1360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003576516.1| PREDICTED: uncharacterized protein LOC100821...    90   1e-15
emb|CAN81006.1| hypothetical protein VITISV_011581 [Vitis vinifera]    90   1e-15
ref|XP_002273351.1| PREDICTED: transcription initiation factor T...    89   2e-15
ref|XP_002273382.1| PREDICTED: transcription initiation factor T...    89   2e-15
ref|XP_003549807.1| PREDICTED: transcription initiation factor T...    89   3e-15

>ref|XP_003576516.1| PREDICTED: uncharacterized protein LOC100821849 [Brachypodium
           distachyon]
          Length = 1407

 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
 Frame = -2

Query: 537 GRRGGRKYQREKQDLPADIEVTKNQRIYGYTELKVIVPESGLVGLHAD---IESVLVDGE 367
           G  GG     +K  L  D+E   NQ IYGYTE++V++ E     LHAD   I ++LVDGE
Sbjct: 14  GAGGGATVLHQKLCLSIDME---NQLIYGYTEIRVVLAEKDTFALHADCMTIRNILVDGE 70

Query: 366 KTEFHFIPHFQLIDDERRFXXXXXXXXXXXXXXXXXXXSLEMELVPNLLILCSKEVKPVD 187
             EF + PH++ +DD+  +                   SL  E VPNL+I   + VK   
Sbjct: 71  AAEFEYSPHWKNVDDQPSWLSVSCLKTAADAACSAYVSSLTSEAVPNLIISSERSVKST- 129

Query: 186 NEQHKFESVDNEQQK---VEENATEKNVENGSQTIAENGVHINEENGSQTNQENGSQSSS 16
           NEQ   E+ +  ++K     +++ +K V+  + +  EN   +N+EN  +  +ENG    +
Sbjct: 130 NEQPGEENGEKHEEKGGNPVQSSDDKAVKVCNGSAEENDKEVNKENKEEAEKENGKDEKN 189

Query: 15  EVK 7
           E++
Sbjct: 190 EME 192


>emb|CAN81006.1| hypothetical protein VITISV_011581 [Vitis vinifera]
          Length = 257

 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
 Frame = -2

Query: 501 QDLPADIEVTKNQRIYGYTELKVIVPESGLVGLHAD---IESVLVDGEKTEFHFIPHFQL 331
           Q L   I++ K +RIYGYTEL++ VP+ G+VGLHA+   IESV VDGE TEF F PH Q 
Sbjct: 27  QKLCLSIDIDK-RRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPHHQH 85

Query: 330 IDDERRFXXXXXXXXXXXXXXXXXXXSLEMELVPNLLILCSKEVKPVDNEQHKFESVDN- 154
            + E+R+                   +LE EL PNLLI+C K  K   +EQ   +S++N 
Sbjct: 86  TESEKRWSSVLSASSAABVASSMYVSALERELXPNLLIMCCKPEKSA-SEQQGQQSLENG 144

Query: 153 --EQQKVEENATEKNVENGSQTIAENGVHINEENGSQTNQE 37
                + ++N     V+   +  AE G+H  E+N   T+ +
Sbjct: 145 LHSSGEPKQNVKLVRVDYWVER-AETGIHF-EDNVLHTDNQ 183


>ref|XP_002273351.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 1 [Vitis vinifera]
          Length = 1325

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
 Frame = -2

Query: 501 QDLPADIEVTKNQRIYGYTELKVIVPESGLVGLHAD---IESVLVDGEKTEFHFIPHFQL 331
           Q L   I++ K +RIYGYTEL++ VP+ G+VGLHA+   IESV VDGE TEF F PH Q 
Sbjct: 27  QKLCLSIDIDK-RRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPHHQH 85

Query: 330 IDDERRFXXXXXXXXXXXXXXXXXXXSLEMELVPNLLILCSKEVKPVDNEQHKFESVDN- 154
            + E+R+                   +LE EL PNLLI+C K  K   +EQ   +S++N 
Sbjct: 86  TESEKRWSSVLSASSAADVASSMYVSALERELDPNLLIMCCKPEKSA-SEQQGQQSLENG 144

Query: 153 --EQQKVEENATEKNVENGSQTIAENGVHINEENGSQTNQE 37
                + ++N     V+   +  AE G+H  E+N   T+ +
Sbjct: 145 LHSSGEPKQNVKLVRVDYWVER-AETGIHF-EDNVLHTDNQ 183


>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 2 [Vitis vinifera]
          Length = 1345

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
 Frame = -2

Query: 501 QDLPADIEVTKNQRIYGYTELKVIVPESGLVGLHAD---IESVLVDGEKTEFHFIPHFQL 331
           Q L   I++ K +RIYGYTEL++ VP+ G+VGLHA+   IESV VDGE TEF F PH Q 
Sbjct: 27  QKLCLSIDIDK-RRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPHHQH 85

Query: 330 IDDERRFXXXXXXXXXXXXXXXXXXXSLEMELVPNLLILCSKEVKPVDNEQHKFESVDN- 154
            + E+R+                   +LE EL PNLLI+C K  K   +EQ   +S++N 
Sbjct: 86  TESEKRWSSVLSASSAADVASSMYVSALERELDPNLLIMCCKPEKSA-SEQQGQQSLENG 144

Query: 153 --EQQKVEENATEKNVENGSQTIAENGVHINEENGSQTNQE 37
                + ++N     V+   +  AE G+H  E+N   T+ +
Sbjct: 145 LHSSGEPKQNVKLVRVDYWVER-AETGIHF-EDNVLHTDNQ 183


>ref|XP_003549807.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 2 [Glycine max]
          Length = 1368

 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 64/168 (38%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
 Frame = -2

Query: 501 QDLPADIEVTKNQRIYGYTELKVIVPESGLVGLHAD---IESVLVDGEKTEFHFIPHFQL 331
           Q L   I++ K Q ++GYTEL++ VPE G+VGLHA+   IESV VDGE TEF + PH Q 
Sbjct: 25  QKLCLSIDIDKRQ-VHGYTELEIAVPEIGIVGLHAENLGIESVCVDGEPTEFEYYPHHQQ 83

Query: 330 I-DDERRFXXXXXXXXXXXXXXXXXXXSLEMELVPNLLILCSKEVKPVDNEQHKFESVDN 154
             +DE+RF                   +LE ELVPNLLI C K  K    +Q        
Sbjct: 84  QGEDEKRFSSVCSPSSAADAAVSVYMSALEKELVPNLLINCCKPSKAESEQQ-------Q 136

Query: 153 EQQKVEENATEKNVE--NGSQTI--------AENGVHINEENGSQTNQ 40
           EQQ   EN    + E     +T+        AE G+H         NQ
Sbjct: 137 EQQPTSENGFHSSAEPKQNVRTVRIDYWIEKAETGIHFRNNLLHTDNQ 184